prot_A-nodosum_M_contig10436.12.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10436.12.2
Unique Nameprot_A-nodosum_M_contig10436.12.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length86
Homology
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BLAST of mRNA_A-nodosum_M_contig10436.12.2 vs. uniprot
Match: D7FR38_ECTSI (AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR38_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 8.120e-25
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0 
Query:    1 MEKCLGQFPSAMLTQAPRRADFFDEDTGMCWGTTECKLPQRYNIWRMRRL-------QRTGFGDLLEKLLAIDPGRRATATEALRHRFFKD 84
            MEKC+G FP  ML +APR  DFFD  +G+C G TEC    R +I RM+RL       + TG GDLL+KLL +DP RRATATEAL HRFF D
Sbjct:  249 MEKCVGLFPPNMLLKAPRSRDFFDLTSGLCKGATECDSENRRHIRRMKRLGDITESVEDTGMGDLLDKLLTLDPKRRATATEALSHRFFDD 339
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BLAST of mRNA_A-nodosum_M_contig10436.12.2 vs. uniprot
Match: A0A6H5L2A1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A1_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.960e-24
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0 
Query:    1 MEKCLGQFPSAMLTQAPRRADFFDEDTGMCWGTTECKLPQRYNIWRMRRLQR-------TGFGDLLEKLLAIDPGRRATATEALRHRFFKD 84
            MEKC+G FP  ML +APR  DFFD  +G+C G TEC    R +I RM+RL+        TG GDLL+KLL +DP RRATATEAL HRFF D
Sbjct:  656 MEKCVGLFPPNMLLKAPRSRDFFDLTSGLCKGATECDSENRRHIRRMKRLEDITESVEDTGMGDLLDKLLTLDPKRRATATEALSHRFFDD 746
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10436.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR38_ECTSI8.120e-2558.24AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) kinas... [more]
A0A6H5L2A1_9PHAE4.960e-2458.24Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 1..83
e-value: 4.9E-12
score: 48.0
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 41..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10436contigA-nodosum_M_contig10436:12184..13135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10436.12.2mRNA_A-nodosum_M_contig10436.12.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10436 12156..13135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10436.12.2 ID=prot_A-nodosum_M_contig10436.12.2|Name=mRNA_A-nodosum_M_contig10436.12.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=86bp
MEKCLGQFPSAMLTQAPRRADFFDEDTGMCWGTTECKLPQRYNIWRMRRL
QRTGFGDLLEKLLAIDPGRRATATEALRHRFFKDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom_sf