prot_A-nodosum_M_contig1038.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1038.20.1
Unique Nameprot_A-nodosum_M_contig1038.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length100
Homology
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: E6ZER2_ECTSI (NADH-ubiquinone oxidoreductase, subunit 4L n=85 Tax=Phaeophyceae TaxID=2870 RepID=E6ZER2_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 4.540e-45
Identity = 85/98 (86.73%), Postives = 92/98 (93.88%), Query Frame = 0
Query:    2 FYSFFFIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            F  FFF++ +LFVIGVGGV+LNRTNIVVVLMSLELALL VSLNFIIFS CLGDL GQ+FAIFIL+IAACESS+GLAIILVYFRVRGSIRIDQASLLKS
Sbjct:    3 FIHFFFVSTLLFVIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSVGLAIILVYFRVRGSIRIDQASLLKS 100          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: Q94Z11_PYLLI (NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z11_PYLLI)

HSP 1 Score: 143 bits (360), Expect = 1.770e-42
Identity = 81/98 (82.65%), Postives = 91/98 (92.86%), Query Frame = 0
Query:    2 FYSFFFIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            F  FF+++ +LF+IGVGGV+ NRTNIVVVLMSLELALL VSLNFIIFSVCL DL GQ+FAIFIL+IAACESSIGLAIILV+FRVRGSIR+DQASLLKS
Sbjct:    3 FIHFFYLSTLLFIIGVGGVIFNRTNIVVVLMSLELALLSVSLNFIIFSVCLDDLTGQIFAIFILVIAACESSIGLAIILVFFRVRGSIRLDQASLLKS 100          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: A0A1L2F1H7_9PHAE (Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1H7_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.900e-39
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0
Query:   18 GGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            GGVVLNRTNIVVVLMSLELALL VSLNFIIFSVCL DLIGQ+FAIFILI+AACESSIGLAIILVYFRVRGSIRIDQASLLKS
Sbjct:   20 GGVVLNRTNIVVVLMSLELALLSVSLNFIIFSVCLADLIGQIFAIFILIVAACESSIGLAIILVYFRVRGSIRIDQASLLKS 101          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: A0A8E8PEE6_9PHAE (Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEE6_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.890e-37
Identity = 73/94 (77.66%), Postives = 88/94 (93.62%), Query Frame = 0
Query:    6 FFIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            FFI+++ +++GV GV+ N+TNIVV+LMSLELALL VSL F+IFSVCLGDL GQ+FAI+IL+IAACESSIGLAIILVYFRV+GSIR+DQASLLKS
Sbjct:    7 FFISSLFYILGVLGVLFNKTNIVVILMSLELALLGVSLGFLIFSVCLGDLQGQIFAIYILVIAACESSIGLAIILVYFRVKGSIRLDQASLLKS 100          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: Q2TUC4_DICDH (NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUC4_DICDH)

HSP 1 Score: 126 bits (316), Expect = 8.970e-36
Identity = 69/93 (74.19%), Postives = 85/93 (91.40%), Query Frame = 0
Query:    7 FIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            ++ +++F IGVGGV+LNRTNI+ +LMSLE++L  +SLNF+IFSV L D+IGQ+FA+FIL IAACESSIGLAIILVY+RVRGSIRIDQASLLKS
Sbjct:    8 YVTSLMFFIGVGGVILNRTNILAILMSLEISLFSISLNFLIFSVYLDDMIGQIFALFILTIAACESSIGLAIILVYYRVRGSIRIDQASLLKS 100          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: A0A8F0FEY2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FEY2_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.270e-35
Identity = 68/93 (73.12%), Postives = 85/93 (91.40%), Query Frame = 0
Query:    7 FIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            F+ +++F IGVGGVVLNRTNI+ +LMSLE+AL  VSLNF+IFSV L D++GQ+FA+FIL +AACESS+GLAIILVY+RVRGSIR+DQA+LLKS
Sbjct:    8 FVISLMFFIGVGGVVLNRTNILAILMSLEIALFSVSLNFLIFSVYLDDIMGQIFAVFILAVAACESSVGLAIILVYYRVRGSIRVDQAALLKS 100          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: A0A4Y5T8D2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8D2_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.990e-34
Identity = 67/93 (72.04%), Postives = 83/93 (89.25%), Query Frame = 0
Query:    7 FIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            +I +++F IG+ GVV NRTNI+ VLMSLE++L  +SLNF+IFSV L D+IGQ+FA+FIL +AACESSIGLAIILVY+RVRGSIR+DQASLLKS
Sbjct:    8 YITSLMFFIGIAGVVFNRTNILAVLMSLEISLFSISLNFLIFSVYLDDIIGQIFALFILTVAACESSIGLAIILVYYRVRGSIRVDQASLLKS 100          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: A0A4Y5T7L0_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T7L0_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 2.100e-28
Identity = 60/96 (62.50%), Postives = 80/96 (83.33%), Query Frame = 0
Query:    3 YSFFFIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLK 98
            YS  FI  ++  IGV G+VLNRTNI+ +LMSLE+ LL +SLNF++FSV L D+IGQ+F I ++ +AACESS+GLA+ILVY+RVRGSI +D+ASLL+
Sbjct:   11 YSLLFI--IMLFIGVFGIVLNRTNILAILMSLEIGLLSISLNFLLFSVFLDDIIGQLFGILVISVAACESSVGLALILVYYRVRGSILLDKASLLR 104          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: A0A7S6ZPE7_9STRA (Nad4L n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPE7_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.580e-28
Identity = 56/98 (57.14%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    2 FYSFFFIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 99
            F  F  +   +F +G+GG+VLNRTNI+++LMS+E++LL + LNF+I SV L D++GQ+F +FIL +A CESSIGLAIIL Y+RVRG IR+++ASL+K+
Sbjct:    3 FLQFCLLTTAMFFLGIGGIVLNRTNILILLMSIEVSLLALGLNFLILSVYLDDILGQVFCLFILTVAGCESSIGLAIILAYYRVRGRIRMNEASLMKA 100          
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Match: A0A481WBS0_GUITH (NADH dehydrogenase subunit 4L n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A481WBS0_GUITH)

HSP 1 Score: 103 bits (256), Expect = 1.290e-26
Identity = 54/95 (56.84%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    4 SFFFIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSVCLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLK 98
             F F+A  LF+IGV G++LNR NI+++LMS+EL LL +  NFI+FSV L D++GQ+FA FIL +AA ES+IGLAI+++Y+R+RGS+ I+  +LLK
Sbjct:    7 KFLFVATSLFLIGVCGIMLNRKNIIIMLMSVELMLLAIDFNFIVFSVFLDDIVGQIFAFFILTVAAAESAIGLAILVIYYRIRGSVSIEYINLLK 101          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1038.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZER2_ECTSI4.540e-4586.73NADH-ubiquinone oxidoreductase, subunit 4L n=85 Ta... [more]
Q94Z11_PYLLI1.770e-4282.65NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella li... [more]
A0A1L2F1H7_9PHAE2.900e-3995.12Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 R... [more]
A0A8E8PEE6_9PHAE1.890e-3777.66Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID... [more]
Q2TUC4_DICDH8.970e-3674.19NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dic... [more]
A0A8F0FEY2_9PHAE1.270e-3573.12NADH dehydrogenase subunit 4L n=1 Tax=Protohalopte... [more]
A0A4Y5T8D2_9PHAE2.990e-3472.04NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris... [more]
A0A4Y5T7L0_9PHAE2.100e-2862.50NADH dehydrogenase subunit 4L n=1 Tax=Ishige okamu... [more]
A0A7S6ZPE7_9STRA2.580e-2857.14Nad4L n=1 Tax=Schizocladia ischiensis TaxID=196139... [more]
A0A481WBS0_GUITH1.290e-2656.84NADH dehydrogenase subunit 4L n=1 Tax=Guillardia t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likePFAMPF00420Oxidored_q2coord: 5..93
e-value: 1.9E-16
score: 59.6
NoneNo IPR availableGENE3D1.10.287.3510coord: 3..99
e-value: 6.9E-26
score: 91.8
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KPANTHERPTHR11434NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT ND4Lcoord: 5..98
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KHAMAPMF_01456NDH1_NuoKcoord: 1..99
score: 15.314255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1038contigA-nodosum_M_contig1038:84725..85024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1038.20.1mRNA_A-nodosum_M_contig1038.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1038 84725..85024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1038.20.1 ID=prot_A-nodosum_M_contig1038.20.1|Name=mRNA_A-nodosum_M_contig1038.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=100bp
GFYSFFFIAAVLFVIGVGGVVLNRTNIVVVLMSLELALLLVSLNFIIFSV
CLGDLIGQMFAIFILIIAACESSIGLAIILVYFRVRGSIRIDQASLLKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039428NUOK/Mnh_C1-like
IPR001133NADH_UbQ_OxRdtase_chain4L/K