prot_A-nodosum_M_contig10320.2.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: D7FNY1_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY1_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.890e-16 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0
Query: 1 MSAIGAAKRCENCGAYSPSIRKDGSDKLFQMPLANKFGTMNQSSKTDIVSAVQGRDLSRTDGD 63
+ A+GA KRCENCGA+SP+IRKDGS+KLFQ+PL++K NQS T IVSAVQ RD + + D
Sbjct: 207 IKAMGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQSCNTQIVSAVQRRDPGKPNED 269
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: A0A6H5KJ16_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ16_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.900e-16 Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0
Query: 1 MSAIGAAKRCENCGAYSPSIRKDGSDKLFQMPLANKFGTMNQSSKTDIVSAVQGRDLSRTDGD 63
+ AIGA KRCENCGA+SP+IRKDGS+KLFQ+PL++K NQ+ T IVSAVQ RD + + D
Sbjct: 207 IKAIGACKRCENCGAFSPNIRKDGSNKLFQVPLSDKNRMANQTCNTQIVSAVQRRDPGKPNED 269
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: A0A836C8M0_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M0_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.840e-8 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
Query: 1 MSAIGAAKRCENCGAYSPSIRKDGSDKLFQMPLANKFGTMNQSSKTDIVSAVQ 53
+ AIGA K+C+NCGA+SP +RKDG KLF PL++K N + SA+Q
Sbjct: 180 IKAIGACKKCQNCGAFSPVLRKDGHTKLFLKPLSDKMQKANNLVAAKMGSAMQ 232
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: A0A7S2Y515_9STRA (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y515_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 5.370e-7 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
Query: 1 MSAIGAAKRCENCGAYSPSIRKDGSDKLFQMPLANKFGTMNQSSKTDIVSAVQGRDLSRTDGD 63
++A A K+C +CGA+SP IR+D S+K F+ L K+ MN + + SA+ G D DG+
Sbjct: 38 LAACRAVKKCAHCGAHSPKIREDSSNKFFRGALPEKYKRMNANEGIQLRSALAGDDEENADGE 100
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: A0A482T921_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T921_9ARCH) HSP 1 Score: 50.1 bits (118), Expect = 1.160e-5 Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
Query: 1 MSAIGAAKRCENCGAYSPSIRKDGSDKLFQMPLA---NKFGTMNQSSKTDIV 49
M A A K+CENC A+SP IRKDG+ K+FQ P+ K + N K D+
Sbjct: 124 MKANLAVKKCENCSAFSPPIRKDGASKIFQRPIPVRQRKSMSSNLKQKVDLT 175
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: A0A087SNI7_AUXPR (DNA-directed RNA polymerase subunit n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SNI7_AUXPR) HSP 1 Score: 50.8 bits (120), Expect = 1.350e-5 Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0
Query: 9 RCENCGAYSPSIRKDGSDKLFQMPLANKFGTMNQSSKTDIVSAV 52
RC NCGA+SPSI+K+G KLF +PL K N+ T+I+ ++
Sbjct: 208 RCANCGAHSPSIKKEGYSKLFLLPLTTKKAAANKMQGTEILPSL 251
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: A0A433PW95_9FUNG (DNA-directed RNA polymerase n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PW95_9FUNG) HSP 1 Score: 50.1 bits (118), Expect = 2.500e-5 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0
Query: 6 AAKRCENCGAYSPSIRKDGSDKLFQMPLANK 36
A K+CENCGAY+ +IRKDG KLFQ+PL K
Sbjct: 175 AKKKCENCGAYARTIRKDGFTKLFQLPLPKK 205
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Match: A0A448YYP3_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYP3_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 2.540e-5 Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 0
Query: 6 AAKRCENCGAYSPSIRKDGSDKLFQMPL--ANKFGTMNQSSKTDIVSAVQGRDLSRTDGDDSE 66
AAK C +CGA+SP IR+D S+K+FQ PL A K ++ + + Q D +G+DSE
Sbjct: 228 AAKSCPHCGAFSPKIRQDSSNKIFQSPLSLAGKRANASEGIRLESAMVKQKDDXXXMNGNDSE 290 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10320.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 8
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig10320.2.1 ID=prot_A-nodosum_M_contig10320.2.1|Name=mRNA_A-nodosum_M_contig10320.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=71bpback to top |