prot_A-nodosum_M_contig10244.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10244.1.1
Unique Nameprot_A-nodosum_M_contig10244.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length209
Homology
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.110e-42
Identity = 76/119 (63.87%), Postives = 95/119 (79.83%), Query Frame = 0
Query:   69 RYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            RYNF+  P MALPG ++TLREV S PK P VDEI++F+  +F  A LSSECS++CLIYVERLM  ARVPLL  TWKP++L  LLLASK+WQDLSSWN EF++V PEY++  I++LE+ F
Sbjct:  143 RYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLF 261          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 8.170e-41
Identity = 76/119 (63.87%), Postives = 95/119 (79.83%), Query Frame = 0
Query:   69 RYNFIQPPAMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            RYNF+  P MALPG ++TLREV S PK P VDEI++F+  +F  A LSSECS++CLIYVERLM  ARVPLL  TWKP++L  LLLASK+WQDLSSWN EF++V PEY++  I++LE+ F
Sbjct:  391 RYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLF 509          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A1E7FWS6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWS6_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.910e-33
Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 0
Query:   78 MALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            MA PG VY LR+V  + + P   EI+DF   +F +  LSSECS++CLIYVERLM +A+VPLL  TW+PI + +LLLASK+WQDLSSWN EF+SV P+++++ I+KLE+ F
Sbjct:  125 MARPGMVYGLRKVQVMYRIPSETEIYDFAQQLFQSVQLSSECSIVCLIYVERLMEIAKVPLLACTWRPIFMCALLLASKVWQDLSSWNIEFSSVYPQFSLESINKLELNF 234          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: B8BQF5_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQF5_THAPS)

HSP 1 Score: 132 bits (333), Expect = 3.570e-32
Identity = 62/110 (56.36%), Postives = 86/110 (78.18%), Query Frame = 0
Query:   78 MALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            MA PG VY++R++  +  TP  DEI++F   +F    LSSECS++CLIYVE+LM +A+VPL+ STW+PI +  LLLASK+WQDLSSWN EFA V P++++D I++LEV+F
Sbjct:  696 MARPGVVYSMRKIRVVYNTPSTDEIYEFAHQLFKKVQLSSECSIVCLIYVEKLMEVAKVPLVRSTWRPIFMCGLLLASKVWQDLSSWNIEFAGVYPQFSLDAINRLEVQF 805          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: K0S4R6_THAOC (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4R6_THAOC)

HSP 1 Score: 132 bits (332), Expect = 4.580e-32
Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 0
Query:   78 MALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            MA PG VY++R++  +  TP  DEI++F   +F    LSSECS++CLIYVE+LM +A+VPL+  TW+PI +  LLLASK+WQDLSSWN EFASV P++++D I+KLEV F
Sbjct:  599 MARPGVVYSMRKIKVVHTTPTTDEIYEFAHQLFKKVQLSSECSIVCLIYVEKLMEVAKVPLVAETWRPIFMCGLLLASKVWQDLSSWNIEFASVYPQFSLDAINKLEVLF 708          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A7R9ZLS7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLS7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.520e-31
Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 0
Query:   78 MALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            MA  G VY LR++    + P   EI++F   +F +  LSSECS+ICLIYVERLM +A+VPLL STW+PI +  LLLASK+WQDLSSWN EFASV P+++VD I+KLE+ F
Sbjct:  288 MARAGMVYGLRKIKVKHEIPSEREIYEFAHQLFDSVQLSSECSIICLIYVERLMEVAKVPLLASTWRPIFMCGLLLASKVWQDLSSWNVEFASVYPQFSVDAINKLELNF 397          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.230e-30
Identity = 60/108 (55.56%), Postives = 83/108 (76.85%), Query Frame = 0
Query:   77 AMALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLE 184
            A ALP   + + +V + P  P V+ I++F+  +F  ACLSSECS++CLIY+ERLM +A VPLL +TWKP+VL  LLLASK+WQDLSSWN EF++V PE+++  I++LE
Sbjct:  336 AGALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLE 443          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A7S4AGI0_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGI0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.370e-30
Identity = 64/110 (58.18%), Postives = 83/110 (75.45%), Query Frame = 0
Query:   78 MALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            MA PG VY LR+V    K P   EI+DF   +F +  LSSECS++CLIYVERLM +A+VPLL  TW+PI +  LLLASK+WQDLSSWN EF+SV P+++++ I+KLE+ F
Sbjct:  574 MARPGMVYGLRKVKVHYKIPTETEIYDFGHQLFKSVQLSSECSIVCLIYVERLMEVAKVPLLACTWRPIFMCGLLLASKVWQDLSSWNIEFSSVYPQFSLEAINKLELNF 683          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A6U3CS23_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3CS23_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.040e-29
Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 0
Query:   78 MALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            MA  G VY L+ V    + P   EI+DF   +F    LSSECS++CLIYVERLM   +VPLL +TW+PIV+  LLLASK+WQDLSSWN EF +V P+Y+++ + +LE+KF
Sbjct:  102 MARAGCVYGLKRVRRHYEIPTEREIYDFAHRLFKTVQLSSECSIVCLIYVERLMEEGKVPLLANTWRPIVMTGLLLASKVWQDLSSWNIEFTNVYPQYSLEAVHRLEIKF 211          
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Match: A0A7S4J8M4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8M4_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.310e-29
Identity = 60/110 (54.55%), Postives = 82/110 (74.55%), Query Frame = 0
Query:   78 MALPGHVYTLREVPSIPKTPDVDEIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGSLLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKF 187
            MA PG VY LR +      P  +EI++F   +F +  LSSECS++CLIY+ERLM +ARVPL+ STW+P+ +  LLLASK+WQDLSSWN EFASV P+++++ I++LE  F
Sbjct:  926 MARPGAVYGLRRIKDDCSAPTTNEIYEFGHRLFKSVQLSSECSIVCLIYIERLMEVARVPLVSSTWRPVFMCGLLLASKVWQDLSSWNIEFASVYPQFSLEAINRLEATF 1035          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10244.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH74_ECTSI1.110e-4263.87Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JJI4_9PHAE8.170e-4163.87Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A1E7FWS6_9STRA4.910e-3357.27Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
B8BQF5_THAPS3.570e-3256.36Cyclin N-terminal domain-containing protein n=1 Ta... [more]
K0S4R6_THAOC4.580e-3257.27Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7R9ZLS7_9STRA2.520e-3159.09Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A835YNR4_9STRA1.230e-3055.56Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S4AGI0_9STRA6.370e-3058.18Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A6U3CS23_9STRA1.040e-2954.55Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S4J8M4_9STRA1.310e-2954.55Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 85..191
e-value: 1.3E-13
score: 52.9
NoneNo IPR availablePANTHERPTHR14248CYCLIN Y, ISOFORM Acoord: 69..187
NoneNo IPR availablePANTHERPTHR14248:SF37SUBFAMILY NOT NAMEDcoord: 69..187
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 101..184
e-value: 8.8E-7
score: 28.7
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 100..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10244contigA-nodosum_M_contig10244:1726..3415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10244.1.1mRNA_A-nodosum_M_contig10244.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10244 1715..4006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10244.1.1 ID=prot_A-nodosum_M_contig10244.1.1|Name=mRNA_A-nodosum_M_contig10244.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=209bp
MFNEKHFRTPTLRVAQCFVSNRGTGCAESTDAARLFSFCCCCCCCCCLAL
MVACKMPSCSHLGMTRASRYNFIQPPAMALPGHVYTLREVPSIPKTPDVD
EIFDFVTNIFVNACLSSECSVICLIYVERLMTLARVPLLESTWKPIVLGS
LLLASKMWQDLSSWNGEFASVCPEYAVDKIDKLEVKFHALSAGTSSYPAA
STRGTTSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf