prot_A-nodosum_M_contig10230.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10230.2.1
Unique Nameprot_A-nodosum_M_contig10230.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length86
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig10230.2.1 vs. uniprot
Match: A0A6H5KS10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS10_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 9.300e-17
Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 0 
Query:   10 QHLFAAATSGLTVFVLDSDTLDPTFVGFYNATATHGEATSVAYNKVYDELAISVAAYDELTQGQVHIISSVEDWI 84
            QH+FAA+ +G+++  L  D L  + +GFYN+ A  GE TSVAYN V+DE+AISV A+D LT+G+V+++ S EDWI
Sbjct:   28 QHVFAASATGVSILKLGDD-LSLSELGFYNSMAAFGEPTSVAYNPVFDEVAISVKAFDPLTKGRVYVVKSSEDWI 101
[Close]
BLAST of mRNA_A-nodosum_M_contig10230.2.1 vs. uniprot
Match: D7FLI4_ECTSI (Alkaline phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI4_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 6.130e-16
Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 0 
Query:   10 QHLFAAATSGLTVFVLDSDTLDPTFVGFYNATATHGEATSVAYNKVYDELAISVAAYDELTQGQVHIISSVEDWI 84
            QH+FAA+ +G+++  L  D L    +GFY++  T GE TSVAYN V+DE+AISV A+D LT+G+V+++ S EDWI
Sbjct:   26 QHVFAASATGVSILKLGDD-LSLWELGFYDSMTTFGEPTSVAYNPVFDEVAISVRAFDPLTRGRVYVVKSCEDWI 99
[Close]
BLAST of mRNA_A-nodosum_M_contig10230.2.1 vs. uniprot
Match: A0A6H5KA01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA01_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.150e-9
Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 0 
Query:   10 QHLFAAATSGLTVFVL-----DSDTLDPTFVGFYNATATHGEATSVAYNKVYDELAISVAAYDE------LTQGQVHIISSVEDWI 84
            QH+F A+  GLTV  L     +   L  + VG Y+ +A  GE TSVAYN V DELA+SV A D+      L++G V I  SV DWI
Sbjct:   69 QHVFLASDGGLTVLKLGDGSVEDGNLSRSLVGIYDLSA-EGETTSVAYNSVCDELAMSVKAIDDDGAEDPLSKGTVRIDPSVADWI 153
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10230.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KS10_9PHAE9.300e-1753.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLI4_ECTSI6.130e-1652.00Alkaline phosphatase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KA01_9PHAE2.150e-946.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10230contigA-nodosum_M_contig10230:14675..14932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10230.2.1mRNA_A-nodosum_M_contig10230.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10230 14675..14932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10230.2.1 ID=prot_A-nodosum_M_contig10230.2.1|Name=mRNA_A-nodosum_M_contig10230.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=86bp
VRADGARRPQHLFAAATSGLTVFVLDSDTLDPTFVGFYNATATHGEATSV
AYNKVYDELAISVAAYDELTQGQVHIISSVEDWIT*
back to top