prot_A-nodosum_M_contig1021.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1021.6.1
Unique Nameprot_A-nodosum_M_contig1021.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length153
Homology
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.540e-31
Identity = 64/159 (40.25%), Postives = 92/159 (57.86%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHIFKKQ-----------RGSKEKICGPEKQPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVFEHMVMQALVNGFILF 151
            N+F+   L+ CLAT  IFAVGTLR NR GV      WA + +   E+G M   R   + I +WID ++ + +ST H+F  +             + EK+    +QP  R++Y + MGGVDV DQ+ G++   HRPM +FWRRVF+    QA+ NG++LF
Sbjct:  159 NFFTGAPLLRCLATRDIFAVGTLRGNRIGVELANYLWAKEGMAATERGQMLTARSDELVIVKWIDSQEVYLMSTKHVFADEWEPLAYEKRAANNNGEKVSS--RQPLARKEYVKNMGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSNGWLLF 315          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 5.750e-27
Identity = 65/171 (38.01%), Postives = 92/171 (53.80%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHIFKKQRGSKEKICGPE---------------------KQPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVFEHMVMQALVNGFILFEK 153
            NYF+SP L  CLA+H IFAVGT R++RT   G  A   S    +  +GDM F R G ++  QW D K  F +ST+H+ +  +G KE+  G +                     +QP +R DY   M GVD+ DQ+ G++   H+    FWRRV++  + QAL N F++F K
Sbjct:  496 NYFTSPTLFECLASHDIFAVGTCRADRT--AGADAYLESLGRTIPNRGDMNFCRSGQVACVQWADSKDIFLISTIHVAQPAKG-KEEAGGIDHFKPLPLSLRAKGRNGEPLDLQQPYMRMDYVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRK 663          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.250e-26
Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHIF---------KKQRGSK---EKICGPEKQPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVFEHMVMQALVNGFILF 151
            N+F+   L+ CLAT  I+AVGTLR NRTGV      W+ +  K  E+  M   R   + I +WI  ++   +S  H+F         +++R +    EK+     QP  R+ Y + MGGVDV DQ+ G +   HRPM +FWRRVF+  +  A+ N ++LF
Sbjct:  186 NFFTGAALLQCLATRDIYAVGTLRGNRTGVDLANYIWSREGTKATEREQMLKARSDELVIVKWIGSQEVHLMSAKHVFAAEWEPLTLERKRAADNNGEKVSS--SQPLARKKYVKNMGGVDVADQRLGAHAHTHRPMTFFWRRVFDQKLSHAVSNAWLLF 343          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5KG44_9PHAE (DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG44_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 7.980e-25
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHIFKKQ-----------RGSKEKICGPEKQPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYF 131
            N+F+   L+ CLAT  IFAVGTLR NRTGV      W  + +K  E+GDM   R   + I +WID ++ + +ST H+F+ +             + EK+    +QP  R++Y + MGGVDV DQ+   +   HRPM +F
Sbjct:  121 NFFTGASLVRCLATRDIFAVGTLRGNRTGVDLAKHLWDKEGLKATERGDMLTARSDELVIVKWIDSQEVYLMSTKHVFEDEWAPLAYERRAANNNGEKVSS--QQPLARKEYVKNMGGVDVADQRLSAHAHTHRPMTFF 257          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5KMF5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF5_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.040e-24
Identity = 70/169 (41.42%), Postives = 84/169 (49.70%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHI------------FK------KQRGSKEKICGPEK---QPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVFEHMVMQALVNGFILF 151
            NYF+SP L  CLA+H IFAVGT RS RT   G L    S        GDM F R G ++  QW D K+    STVHI            FK      K +G      G  K   QP +R DY + MGGVD  DQ+  ++   HR     WRRVF+  +MQ L N F+LF
Sbjct:  204 NYFTSPTLFACLASHEIFAVGTCRSPRT--CGALPYIQSLERTTPNPGDMTFCRSGEMAFVQWRDSKEILLCSTVHIGETGEEGGDINHFKPVPLALKGKG----WAGKHKEHDQPVMRMDYVKYMGGVDRADQQNESHYHDHRSYTNHWRRVFDAKIMQMLTNNFLLF 366          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5JC56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC56_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.260e-18
Identity = 56/148 (37.84%), Postives = 75/148 (50.68%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHIFKKQRGSKEKICGPEKQPPVRRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVFEHMVMQALVNGFILF 151
            N+F+   L+  LAT  IFAV T R NRTGV      W+ + +KV E+G M  LR    S  +  D                  + EK+     QP  R+++ + MGGVDV DQ  G +   HRPM +FWRRVF+    QA+ N + LF
Sbjct:  233 NFFTGAALLRYLATRDIFAVRTPRGNRTGVDLSNYIWSKEGMKVTERGQM--LRPARTSSKRAADH-----------------NGEKVSS--SQPLARKEHVKNMGGVDVADQWLGAHAHTHRPMTFFWRRVFDQKFSQAVSNAWFLF 359          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A3Q4HNC3_NEOBR (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4HNC3_NEOBR)

HSP 1 Score: 79.3 bits (194), Expect = 1.780e-14
Identity = 55/156 (35.26%), Postives = 79/156 (50.64%), Query Frame = 0
Query:    2 VGNYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVH-IFKK---QRGSKEKICGPEKQPPVRR---DYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVFEHMVMQALVNGFIL 150
            V N+++SP L   L    I   GT+R NRTG      T  +   K AE+GD+ ++R G +   +W D ++    STVH  F     QR  KE      K  PV     DY + MGGVD++D   G Y   H+ M ++ + +F H +  A+VN F+L
Sbjct:  141 VDNFYTSPTLFSDLYKKKISCCGTIRKNRTGFP---RTLKNDFPKKAERGDVRWIRKGELLFVKWTDTREVTMCSTVHKAFSGKTVQRKVKEAAGWTTKAVPVPDCVVDYNKNMGGVDLSDALIGYYTVLHKTMKWY-KTLFYHFLDIAVVNSFLL 292          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5KCK7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK7_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.940e-14
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHI 80
            NYF+SP L  CLA+H IFAVGT RSNRT  GG +    S + +  E+G+M F R GN++  QW+D K+    S++HI
Sbjct:   69 NYFTSPTLFECLASHDIFAVGTCRSNRT--GGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHI 143          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.530e-14
Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHI 80
            NYF SP L  CLA+H IFAVGT RSNRT  GG +    S + +  E+G+M F R GN++  QW+D K+    S++HI
Sbjct:  898 NYFKSPTLFECLASHDIFAVGTCRSNRT--GGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHI 972          
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Match: A0A6H5KN67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN67_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 6.370e-14
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    4 NYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEKGDMAFLRWGNISITQWIDKKKFFFLSTVHIFKKQRGSKE 89
            NYF+SP ++ CLA+H IFAVGT R++RT   G  A   S    +  +GDM F R   ++  QW D K  F +ST+H+    +G +E
Sbjct:    3 NYFTSPTMLECLASHDIFAVGTYRADRT--AGADAYLESLGRTIPNRGDMNFCRSRQVACVQWADSKDIFLISTIHVAYPAKGKEE 86          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1021.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQZ5_9PHAE1.540e-3140.25DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5LEE0_9PHAE5.750e-2738.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDZ7_9PHAE2.250e-2637.50DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KG44_9PHAE7.980e-2538.85DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KMF5_9PHAE1.040e-2441.42DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JC56_9PHAE1.260e-1837.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3Q4HNC3_NEOBR1.780e-1435.26DDE_Tnp_1_7 domain-containing protein n=1 Tax=Neol... [more]
A0A6H5KCK7_9PHAE1.940e-1449.35DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5JW40_9PHAE3.530e-1449.35HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5KN67_9PHAE6.370e-1441.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 2..148
e-value: 1.5E-12
score: 47.5
NoneNo IPR availablePANTHERPTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4coord: 2..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1021contigA-nodosum_M_contig1021:218763..219512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1021.6.1mRNA_A-nodosum_M_contig1021.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1021 218742..219512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1021.6.1 ID=prot_A-nodosum_M_contig1021.6.1|Name=mRNA_A-nodosum_M_contig1021.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=153bp
MVGNYFSSPVLMGCLATHLIFAVGTLRSNRTGVGGPLATWASKNVKVAEK
GDMAFLRWGNISITQWIDKKKFFFLSTVHIFKKQRGSKEKICGPEKQPPV
RRDYCRCMGGVDVTDQKAGTYLCPHRPMNYFWRRVFEHMVMQALVNGFIL
FEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029526PGBD