prot_A-nodosum_M_contig1021.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1021.4.1
Unique Nameprot_A-nodosum_M_contig1021.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length243
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1021.4.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 5.650e-18
Identity = 57/151 (37.75%), Postives = 78/151 (51.66%), Query Frame = 0 
Query:   76 EEEFGQLSFLLGEPQVCLETSTDAAAALLEQAVSDPQKIRDKLLQLAVQLAGECQHSAPLKRWDPKDPKANTTCGKLQAQVVADVDIEAIFKRQKEQGQKGRPDDVPYVLARSVRSNLQYQAAAEIGARGGGNMAVRGKCMERAMQMFCGK 226
            EE   +L+ L+ +        +  A ALL+ A+ +P  +R  L + A   A  C    PL +W   D        + QA ++A V I+ +  RQK +  +G  D+VPYVLAR+VRSNLQY AA EIGA G GN   RG        MFC +
Sbjct:   26 EELDDELATLVADEPPRAAKQSPLATALLKTALENPGGVRSLLREQAETAAQGCGCQTPLAQWKKGDXXXXXXXXRQQAHIIAGVSIQHVLDRQKARDSEG--DNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRG--------MFCSR 166
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1021.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNQ5_ECTSI5.650e-1837.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1021contigA-nodosum_M_contig1021:101804..102980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1021.4.1mRNA_A-nodosum_M_contig1021.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1021 101797..103076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1021.4.1 ID=prot_A-nodosum_M_contig1021.4.1|Name=mRNA_A-nodosum_M_contig1021.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=243bp
MSEDEERVSKRARTNYPSEVSFGDLSKEENEHSVAQVSRCADTGACAWTE
DGTKPQLLGGLGEEVGGGSSLQQTAEEEFGQLSFLLGEPQVCLETSTDAA
AALLEQAVSDPQKIRDKLLQLAVQLAGECQHSAPLKRWDPKDPKANTTCG
KLQAQVVADVDIEAIFKRQKEQGQKGRPDDVPYVLARSVRSNLQYQAAAE
IGARGGGNMAVRGKCMERAMQMFCGKKQEGIPRAVVEALLRY*
back to top