prot_A-nodosum_M_contig1021.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig1021.4.1
Unique Name	prot_A-nodosum_M_contig1021.4.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	243

Homology

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BLAST of mRNA_A-nodosum_M_contig1021.4.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 5.650e-18
Identity = 57/151 (37.75%), Postives = 78/151 (51.66%), Query Frame = 0

Query:   76 EEEFGQLSFLLGEPQVCLETSTDAAAALLEQAVSDPQKIRDKLLQLAVQLAGECQHSAPLKRWDPKDPKANTTCGKLQAQVVADVDIEAIFKRQKEQGQKGRPDDVPYVLARSVRSNLQYQAAAEIGARGGGNMAVRGKCMERAMQMFCGK 226
            EE   +L+ L+ +        +  A ALL+ A+ +P  +R  L + A   A  C    PL +W   D        + QA ++A V I+ +  RQK +  +G  D+VPYVLAR+VRSNLQY AA EIGA G GN   RG        MFC +
Sbjct:   26 EELDDELATLVADEPPRAAKQSPLATALLKTALENPGGVRSLLREQAETAAQGCGCQTPLAQWKKGDXXXXXXXXRQQAHIIAGVSIQHVLDRQKARDSEG--DNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRG--------MFCSR 166

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1021.4.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1021.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

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POSITION

0


Match Name	E-value	Identity	Description
D8LNQ5_ECTSI	5.650e-18	37.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

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POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig1021	contig	A-nodosum_M_contig1021:101804..102980 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1021.4.1	mRNA_A-nodosum_M_contig1021.4.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig1021 101797..103076 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig1021.4.1 ID=prot_A-nodosum_M_contig1021.4.1|Name=mRNA_A-nodosum_M_contig1021.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=243bp
MSEDEERVSKRARTNYPSEVSFGDLSKEENEHSVAQVSRCADTGACAWTE
DGTKPQLLGGLGEEVGGGSSLQQTAEEEFGQLSFLLGEPQVCLETSTDAA
AALLEQAVSDPQKIRDKLLQLAVQLAGECQHSAPLKRWDPKDPKANTTCG
KLQAQVVADVDIEAIFKRQKEQGQKGRPDDVPYVLARSVRSNLQYQAAAE
IGARGGGNMAVRGKCMERAMQMFCGKKQEGIPRAVVEALLRY*