prot_A-nodosum_M_contig10207.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10207.1.1
Unique Nameprot_A-nodosum_M_contig10207.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length72
Homology
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5JYE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE2_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 7.990e-13
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL+AG+L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG +
Sbjct:   63 IRQRRLLFAGSLARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFGAD 120          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.450e-12
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG +
Sbjct:  195 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFGAD 252          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5JFE2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.640e-12
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG +
Sbjct:  325 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFGAD 382          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 5.690e-12
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG +
Sbjct:  458 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFGAD 515          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.070e-11
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D+ AFG +
Sbjct:  547 IRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLNAFGAD 604          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5K1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X4_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.700e-11
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL+AG L R   GRLPKR+M G L G  +R RGG+E+ W  CV  D++AFG +
Sbjct:  219 IRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKRRRGGQEQNWPKCVLDDLKAFGAD 276          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5K2V9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V9_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.280e-10
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    8 LWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            L+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG +
Sbjct:  287 LFAGALARQPDGRLPKRLMFGELAGGEKRSRGGQEQNWPKCVLDDLKAFGAD 338          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5KQ16_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ16_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.210e-9
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIR 54
            +R RR+L+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++
Sbjct:  195 IRQRRILFAGALTRQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLK 247          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5K2V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V4_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.540e-9
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL A  L R   GRLPKR+M G L G  +R RGG+++ W  CV  D++AFG +
Sbjct:  175 IRQRRLLLARALARQPDGRLPKRLMLGELAGGEKRRRGGQKQNWPKCVLDDLKAFGAD 232          
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Match: A0A6H5JTZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 9.140e-9
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 LRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIN 59
            +R RRLL+AG + R   GRLPKR++ G L G  +R   G+E+ W  CV  D++AFG +
Sbjct:  176 IRQRRLLFAGAMARQPDGRLPKRLVLGELAGGEKRRSAGQEQNWPKCVLDDLKAFGAD 233          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10207.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYE2_9PHAE7.990e-1355.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JAH7_9PHAE2.450e-1255.17Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFE2_9PHAE5.640e-1255.17Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE5.690e-1255.17Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KS82_9PHAE1.070e-1155.17Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1X4_9PHAE3.700e-1153.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2V9_9PHAE3.280e-1053.85Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ16_9PHAE1.210e-952.83Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K2V4_9PHAE3.540e-950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTZ8_9PHAE9.140e-946.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10207contigA-nodosum_M_contig10207:7668..7883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10207.1.1mRNA_A-nodosum_M_contig10207.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10207 7668..7883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10207.1.1 ID=prot_A-nodosum_M_contig10207.1.1|Name=mRNA_A-nodosum_M_contig10207.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=72bp
MLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQ
SDIRAFGINGDWETMAVKAEVW
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