prot_A-nodosum_M_contig1019.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1019.8.1
Unique Nameprot_A-nodosum_M_contig1019.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length296
Homology
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.330e-30
Identity = 112/241 (46.47%), Postives = 134/241 (55.60%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRVADLDSESDLYMTGVGPVLPATRKAPAAEAASSAPSRRAEIGSVNDSSSS--------------DXXXXXXXXXXXXXXXXXXXXXXXXXSSTSGRVSSGDIPAPTGTEARRLQHFGKPPELQSGRTRSQSR 226
            MW+G P   G  +PFLKPA+Y+VKR  KS+PKAQ C+Y+GP +N  RDC+R L   R  +T RN TWQ VP AP A  Q  PPIAEE E  A EE   GEGAS+Q GGR      +      G G   P++R++ A+ A S+  +  A++G   D   S              D    XXXXXXXXXXXXXX     XX    G  S  D+PA  G EARRL  F KP EL S RTR   R
Sbjct:  380 MWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAEREPVDGGPGDAGDG--APSSRES-ASVAPSTTSTGTADVGGGEDDRRSSSXRGXXXXXXXXXDSSSRXXXXXXXXXXXXXXSVDDGXXXXXXGSDSETDLPALCGPEARRLARFDKPAELTSRRTRENPR 617          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.690e-29
Identity = 115/253 (45.45%), Postives = 134/253 (52.96%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRVADLDSESDLYM---TGVGPVLPATRKAPAA-----------EAASSAPSRRAEIGSVNDSSSSDXXXXXXXXXXXXXXXXXXXXXXXXX------------SSTSGRVSSGDIPAPTGTEARRLQHFGKPPELQSGRTRSQSR 226
            MW+G P      +PFLKPA+Y+VKR  KS+PKA+ C+Y+GP +N  RDC+R L   R  +T RN TWQ VP AP A  Q  PPIAEE E    EE   GEGAS   GGR      +   ++      GP  P  R APAA           +A   APS R E  SV  S++S        XXXXXXXXXXXXXXXXXX             S S   S  DIPA  G E R+L  FG+P EL S R R   R
Sbjct:    1 MWHGHPPPPEATYPFLKPAVYKVKRTHKSEPKAKKCFYLGPGINTNRDCVRILNEKRQAITTRNFTWQSVPAAPTAHPQPLPPIAEEDEELTTEEDEGGEGASCHGGGRAEGEPEDGGFHLDTTANPGPAEPPARDAPAAPPAAPQESGAGDAGDGAPSSR-EGASVAPSTTSTGMADVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXNXSGSGSDSGSDTDIPALRGPEGRKLARFGEPAELTSRRLRENPR 252          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5JQS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS5_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 6.280e-29
Identity = 114/246 (46.34%), Postives = 135/246 (54.88%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGG------RVADLDSESDLYMTGVGP-------------VLPATRKAPAAEAASSAPSRRAEIGSVNDSSSSDXXXXXXXXXXXXXXXXXXXXXXXXXSSTSGRVSSGDIPAPTGTEARRLQHFGKPPELQSGRTRSQSR 226
            MW+G P   G  +PFLKPA+Y+VKR  K +PKAQ C+ +GP +N+  DC+R L   R  +T RN+TWQ VP AP A  Q  PPIAEE +  A EE   GEGASSQ  G      RVA   + +    +G G              V P+T     A+A      RR+ I   +  S SD  XXXXXXXXXXXXXXXXXXXX          S  D+PA  G EARRL  FGKP E  S RTR   R
Sbjct:    1 MWHGHPPPPGATYPFLKPAVYKVKRTHKPEPKAQKCFCLGPGINNNSDCVRILNEKRQAITTRNSTWQSVPTAPTALPQSLPPIAEEEKKFATEENEVGEGASSQAPGPAGPPARVAPAAAPAAPQESGAGDXXXGAPSSREGPSVAPSTTSTGTADAGGGEDDRRSSISRGSGGSGSDSSXXXXXXXXXXXXXXXXXXXXSD--------SETDLPALCGPEARRLARFGKPAEFTSRRTRENPR 238          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5L013_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L013_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.270e-28
Identity = 118/247 (47.77%), Postives = 135/247 (54.66%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRVAD--LDSESDLYMTGVGPVLPATRKAP--------------AAEAASSAPSRR----AEIGSVNDSSSSDXXXXXXXXXXXXXXXXXXXXXXXXXSSTSGRVSSGDIPAPTGTEARRLQHFGKPPELQSGRTRSQSR 226
            MW+G P      +PFLKPA+Y+VKR   S+PK+Q C+Y+GP +N  RDC+R L   R  +T RN TWQ VP AP A  Q  PPIAEE E  A EE   GEGASSQ GGR     LD      +       PA   AP              + E AS APS +    A++G   D   S     XXXXXXXXXXXXXXXXXXXXX  T       D+PA  G EARRL  F KP EL S RTR   R
Sbjct:  101 MWHGHPPPPVATYPFLKPAVYKVKRTHMSEPKSQKCFYLGPGINTNRDCVRILNEKRQAITTRNFTWQSVPAAPTALPQSLPPIAEEEEEFATEEDEVGEGASSQGGGRAEGEPLDGGPGFNLGTTAAPRPAGPPAPQESGAGDAGNGARSSREDASVAPSTKLAGMADVGGGEDDRCSSSSRGXXXXXXXXXXXXXXXXXXXXXXXT-------DLPALRGPEARRLASFDKPAELTSRRTRENPR 340          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5KJP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP4_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.700e-28
Identity = 105/262 (40.08%), Postives = 124/262 (47.33%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRVAD--LDSESDLYM-TGVGPVL--PATRKAPAAEAASSAPSRRAEIGSVNDSSSSDXXXXXXXXXXXXXXXXXXXXXXXXXSSTSGRVSSG---------DIPAPTGTEARRLQHFGKPPELQSGRTRSQSRGWTLSES-----STDALLAYA 242
            M +  P   G  +PFLKPA+Y+VKR  KS+PKAQ C+Y+GP +N  RDC+R +   R  +T RN TWQ VP AP A  Q  PPIAEE E  A  E   GEGASSQ GGR     +D      + T   P L  P  R APAA  A+   S   + G    SS+ D                         S  SG   S          D+PA  G E  RL  F KP EL S RTR   R  +  ES     S +ALLA A
Sbjct:   28 MCHEHPPPPGVTYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRIVNGKRQAITTRNFTWQSVPAAPTALPQSLPPIAEEEEKFATGEDEVGEGASSQGGGRAEGERVDGGPGFSLGTTAAPGLAGPPARVAPAAPLAAPQESGAGDAGDGAPSSTEDESIAPSTTLAGMADVGGGEDDRRSSSRGSGGSGSDSGSYSDSETDLPALRGPEPLRLARFDKPAELTSRRTRENPRRNSRYESPPSPTSAEALLASA 289          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5JHM6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.420e-27
Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRV 109
            MW+G P  +G  +PFLKPA+Y+VKR  KS+PKAQ C+Y+GP +N  RDC+R L   R  +T RN TWQ VP  P A  Q  PPIAEE E  A EE   GEGA+ Q GGR 
Sbjct:    1 MWHGHPPPSGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPATPAALPQSLPPIAEEEEEFATEEDEVGEGAAYQGGGRA 110          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.470e-27
Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRV 109
            MW+G P   G ++PFLKPA+Y+VKR  KS PKAQ C+Y+GP +N  RDC+R +   R  +T RN TWQ VP AP A  Q  PPIAEE E  A EE   GEGASSQ GGR 
Sbjct:  155 MWHGHPPPPGAMYPFLKPAVYKVKRTHKSDPKAQKCFYLGPGINTNRDCVRIINDKRQAITTRNFTWQSVPTAPAALPQSLPPIAEEEEEFATEEDEVGEGASSQGGGRA 264          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5L3E0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E0_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.490e-27
Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRV 109
            MW+G P   G  +PFLKPA+Y+VKR  KS+PKAQ C+Y+GP +N  RDC+R L   R  +T RN TWQ VP AP A  Q  PPIAEE E  A EE   GEGAS+Q GGR 
Sbjct:  734 MWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRA 843          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5JVW7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW7_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.690e-27
Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRV 109
            MW+G P   G  +PFLKPA+Y+VKR  KS+PKAQ C+Y+GP +N  RDC+R L   R  +T RN TWQ VP AP A  Q  PPIAEE E  A EE   GEGAS+Q GGR 
Sbjct:  112 MWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRA 221          
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.800e-27
Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 0
Query:    1 MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCMRDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGES-AAEEGASGEGASSQRGGRV 109
            MW+G P   G  +PFLKPA+Y+VKR  KS+PKAQ C+Y+GP +N  RDC+R L   R  +T RN TWQ VP AP A  Q  PPIAEE E  A EE   GEGAS+Q GGR 
Sbjct:  898 MWHGHPPPPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAITTRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRA 1007          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1019.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE1.330e-3046.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGX6_9PHAE2.690e-2945.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQS5_9PHAE6.280e-2946.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L013_9PHAE4.270e-2847.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJP4_9PHAE4.700e-2840.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHM6_9PHAE2.420e-2755.45Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JBN2_9PHAE2.470e-2757.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3E0_9PHAE2.490e-2757.27Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JVW7_9PHAE2.690e-2757.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTI6_9PHAE2.800e-2757.27Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1019contigA-nodosum_M_contig1019:250639..251526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1019.8.1mRNA_A-nodosum_M_contig1019.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1019 247445..251767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1019.8.1 ID=prot_A-nodosum_M_contig1019.8.1|Name=mRNA_A-nodosum_M_contig1019.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=296bp
MWYGSPSLAGEVWPFLKPAIYRVKRKDKSQPKAQDCYYVGPSVNHPRDCM
RDLTTHRTILTIRNATWQHVPPAPPAPQQHFPPIAEEGESAAEEGASGEG
ASSQRGGRVADLDSESDLYMTGVGPVLPATRKAPAAEAASSAPSRRAEIG
SVNDSSSSDSSNSKDDSTSKRGSDSNASHTSNDSSSTSGRVSSGDIPAPT
GTEARRLQHFGKPPELQSGRTRSQSRGWTLSESSTDALLAYARTDAKETE
VTERVHDLLLEEHLEEERERLDELQDWFERRGLRVKQREEEQSPD*
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