prot_A-nodosum_M_contig1015.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1015.2.1
Unique Nameprot_A-nodosum_M_contig1015.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length110
Homology
BLAST of mRNA_A-nodosum_M_contig1015.2.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.680e-19
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   23 ARGCSRGIGCGETISIEAFVQFCKWWKKTMATTSRMLADWVSTRPIKIHGFVSRERAESMLWEKEPGTFLFRFSASEPGLMTIS 106
            A G   G G G  IS+EAFV+F  WW   M T S +  DW ST P ++HGF+SR  AE  L E+E GTFL RFS S+PG + +S
Sbjct:  106 AFGRDGGNGNGNVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVS 189          
BLAST of mRNA_A-nodosum_M_contig1015.2.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 6.440e-17
Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 0
Query:    1 MDSDDWSFVCHMLKSKQKDFGQARGCSRGIGCGET--------ISIEAFVQFCKWWKKTMATTSRMLADWVSTRPIKIHGFVSRERAESMLWEKEPGTFLFRFSASEPGLMTIS 106
            +D+    F+  +L+  Q+   +AR  + G  C E         +S+EAF  F +WW   MAT   +  DW +TRP+++HGF+SR  ++ +L ++E GTFL RFS S  G + IS
Sbjct:  217 VDTPQLEFIRGILRRGQEAVAKARWGATGDECTEVGGDGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVIS 330          
BLAST of mRNA_A-nodosum_M_contig1015.2.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.000e-16
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   34 ETISIEAFVQFCKWWKKTMATTSRMLADWVSTRPIKIHGFVSRERAESMLWEKEPGTFLFRFSASEPGLMTIS 106
            + IS++AFV+F  WW   M T S +  DW ST P ++HGF+SR  AE  L E+E GTFL RFS S+PG + +S
Sbjct:  786 DVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVS 858          
BLAST of mRNA_A-nodosum_M_contig1015.2.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 3.480e-16
Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    2 DSDDWSFVCHMLKSKQKDFGQARGCSRGIGCGET--------ISIEAFVQFCKWWKKTMATTSRMLADWVSTRPIKIHGFVSRERAESMLWEKEPGTFLFRFSASEPGLMTIS 106
            D+    F+  +L+  Q+   +AR  + G  C E         IS+EAF +F +WW   ++T   +  DW  TRP+++HGF+SR  A+ +L ++E GTFL RFS S+ G + IS
Sbjct:  715 DTPQLEFIRGILRRGQEAVARARWGATGDECPEVDGGCRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVIS 827          
BLAST of mRNA_A-nodosum_M_contig1015.2.1 vs. uniprot
Match: W7U5S9_9STRA (Sh2 domain containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5S9_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.260e-8
Identity = 26/73 (35.62%), Postives = 44/73 (60.27%), Query Frame = 0
Query:   34 ETISIEAFVQFCKWWKKTMATTSRMLADWVSTRPIKIHGFVSRERAESMLWEKEPGTFLFRFSASEPGLMTIS 106
            + + I  F  FC+ W     + + +  +W+  +P  +HGF+SR+  E++L   + GTFLFRFS S  GL+++S
Sbjct:  738 DLVRITDFAVFCEGWVPAQNSIALLCREWLCNKPRLLHGFLSRKETEALLQGYKEGTFLFRFSTSHLGLLSLS 810          
BLAST of mRNA_A-nodosum_M_contig1015.2.1 vs. uniprot
Match: A0A7S2F5D4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5D4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.020e-7
Identity = 26/72 (36.11%), Postives = 40/72 (55.56%), Query Frame = 0
Query:   36 ISIEAFVQFCKWWKKTMATTSRMLADWVSTRPIKIHGFVSRERAESMLWEKEPGTFLFRFSASEPGLMTISV 107
            +S    V   KWW   ++  + +   W   +  +IHG + R  A+ +L  ++PGTFLFRFS S+P  + ISV
Sbjct:   68 VSRSMLVALKKWWTPVLSIVTLLPGPW---QQWQIHGMLDRATADQLLLNRQPGTFLFRFSGSQPQFLVISV 136          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1015.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KJ41_9PHAE1.680e-1951.19SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPT3_9PHAE6.440e-1736.84SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNX8_ECTSI1.000e-1650.68SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI3.480e-1637.17SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
W7U5S9_9STRA1.260e-835.62Sh2 domain containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2F5D4_9STRA2.020e-736.11Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000980SH2 domainPFAMPF00017SH2coord: 70..109
e-value: 1.0E-9
score: 38.4
IPR000980SH2 domainPROSITEPS50001SH2coord: 69..110
score: 10.98272
IPR036860SH2 domain superfamilyGENE3D3.30.505.10SH2 domaincoord: 62..110
e-value: 3.1E-13
score: 52.2
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 70..109
NoneNo IPR availableCDDcd00173SH2coord: 71..110
e-value: 4.16128E-12
score: 55.1543

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1015contigA-nodosum_M_contig1015:34239..34568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1015.2.1mRNA_A-nodosum_M_contig1015.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1015 34239..34568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1015.2.1 ID=prot_A-nodosum_M_contig1015.2.1|Name=mRNA_A-nodosum_M_contig1015.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=110bp
MDSDDWSFVCHMLKSKQKDFGQARGCSRGIGCGETISIEAFVQFCKWWKK
TMATTSRMLADWVSTRPIKIHGFVSRERAESMLWEKEPGTFLFRFSASEP
GLMTISVKTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR036860SH2_dom_sf