prot_A-nodosum_M_contig1015.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1015.14.1
Unique Nameprot_A-nodosum_M_contig1015.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length284
Homology
BLAST of mRNA_A-nodosum_M_contig1015.14.1 vs. uniprot
Match: D7FNX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNX6_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 2.520e-44
Identity = 118/285 (41.40%), Postives = 162/285 (56.84%), Query Frame = 0
Query:   10 EAVDYQARVVEITTLLRGRAPKLFPCNIAPRSCK-PYTSILGLCSTTRQRVDAKVFI-EKAKDAIAEQRRKKHEAGQGGDNGKDVDDQTM------NIVVVAEIDLTARKFRVTGAKFVDNIDATLHDLERVMELLLNSSENDLEPYVRRFASANELRSDTPAASTMQEVCSLSYALQVTASNLSGWTARAGSYDLPLARDVDMTTLLRELFDEPPTPSAPLEPAGET-----GKRGGARSRGQKKGKPTKARMXXEAGATEGTELRADEAKGARGPSKGSKRKK 281
            E  + Q RV+EI  LL+ +AP L P ++ PR  K    +I+ LCST RQR DA+ F+  KA+ A  +      E G+G + G+ ++ +        ++V+  E D+  R FR+T AK    IDATL DL  +M+L LN+   +LEPYV RFA+ANEL   T AA  +   CSL+YALQV  S+++GW    GS+ LPLA DVDMT ++ ELF  PPTP  P  P         GK+GGA+       K   A    E+GA     + +++ K A+   KGSKRKK
Sbjct:    9 EVDEVQDRVMEIAALLKKKAPHLAP-SVIPRPYKHAAANIVTLCSTPRQRADAEAFLASKAESATVDDVAAAGERGRG-EEGQQIESEDAAEGGRHHVVLETETDIATRTFRITAAKLGGRIDATLSDLNLLMDLHLNAPRQELEPYVERFAAANELDPST-AALALHGACSLAYALQVATSSIAGWNGFVGSHPLPLAGDVDMTVVMNELFRPPPTP--PASPRSXXXXXTKGKKGGAK-------KKKAAAAGGESGAAGVEGVVSEKGKTAK---KGSKRKK 278          
BLAST of mRNA_A-nodosum_M_contig1015.14.1 vs. uniprot
Match: A0A7S2SU08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU08_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.600e-10
Identity = 39/118 (33.05%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   97 MNIVVVAEIDLTARKFRVTGAKFVDNIDATLHDLERVMELLLNSSENDLEPYVRRFASANELRSDTPAASTMQEVCSLSYALQVTASNLSGWTARAGSYDLPLARDVDMTTLLRELFD 214
            +  V V  +D T  +  V     V  + ATL +L+ +++L L+ S  +LEPYV  F   N  RS+ PA   MQE  +++Y+ QV   N+ GW  R G + +P+  +V +  ++ EL +
Sbjct:   74 VGFVPVCRVDPTRGRVTVDKFLLVGEVQATLSNLDAMLQLQLHGSPAELEPYVTFFGDRN--RSEEPARD-MQEALNVAYSAQVVVDNMPGWATRIGEHKVPVPSNVPVRQVISELCE 188          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1015.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNX6_ECTSI2.520e-4441.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SU08_9STRA3.600e-1033.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1015contigA-nodosum_M_contig1015:97814..104186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1015.14.1mRNA_A-nodosum_M_contig1015.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1015 97794..104727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1015.14.1 ID=prot_A-nodosum_M_contig1015.14.1|Name=mRNA_A-nodosum_M_contig1015.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=284bp
MGATTEGTTEAVDYQARVVEITTLLRGRAPKLFPCNIAPRSCKPYTSILG
LCSTTRQRVDAKVFIEKAKDAIAEQRRKKHEAGQGGDNGKDVDDQTMNIV
VVAEIDLTARKFRVTGAKFVDNIDATLHDLERVMELLLNSSENDLEPYVR
RFASANELRSDTPAASTMQEVCSLSYALQVTASNLSGWTARAGSYDLPLA
RDVDMTTLLRELFDEPPTPSAPLEPAGETGKRGGARSRGQKKGKPTKARM
AKEAGATEGTELRADEAKGARGPSKGSKRKKRP*
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