prot_A-nodosum_M_contig1012.4.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1012.4.2
Unique Nameprot_A-nodosum_M_contig1012.4.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length310
Homology
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: D7G2Q9_ECTSI (FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q9_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 7.600e-125
Identity = 186/253 (73.52%), Postives = 217/253 (85.77%), Query Frame = 0
Query:   56 MAGALDETKGVSVGLGDYKDGSITVEMPRMEISDAQVEAALAASKKPYRLIPVRFVEEGGTKMGHTVIMDWEAKVNGELVHGAKKENFELELKEGHTDPWNTFSSKIAVGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDELRVLLRQKGEATMQSRMDQAVDEAVKKALLASCKVDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPREVTALLRREANVVFSKK 308
            MAG LDETKGV+V L +YK G++TV +P +EI++AQVEAAL  SKKPY+LIPVRFVEEGGTKMGHTVIM+W+AKV+G  V GAKKENFELE KEGH +PW TF++K+AVGMGQMETKVFP  FP DFEIEGLRGK+ALVQAVVK+IAR+E + PETRSDDE+R  LR KGE T+++R D+AVDEAVKK LL+SC V+ADKVLNAVSWAKFGE+STL+FKWNCIKEKIA  EGIEPR V   LR EA V+  +K
Sbjct:    1 MAGDLDETKGVTVDLAEYKGGAVTVRVPLIEITEAQVEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAKKENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEVRAALRVKGEQTVKNRTDKAVDEAVKKFLLSSCNVNADKVLNAVSWAKFGEQSTLDFKWNCIKEKIAVAEGIEPRAVVEFLRDEAEVILMEK 253          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A7S0VQZ5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VQZ5_9CRYP)

HSP 1 Score: 175 bits (443), Expect = 5.110e-49
Identity = 110/278 (39.57%), Postives = 156/278 (56.12%), Query Frame = 0
Query:   30 PPPVFASPAAANGAPSSQRRSQSSRMMAGALDETKGVSVGLGDYKDGSITVEMPRMEISDAQVEAALAASKKPYRLIPVRFVE-EGGTKMGHTVIMDWE--AKVNGELVHGAKKENFELELKEGHTDPWNTFSSKIAVGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDELRVLLRQKGEATMQSRMDQAVDEAVKKALLASCKVDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPREVTALLRREANVV 304
            PPP+ A+ AA         RS     M G     K   V LG Y   S+T  +PR E+S+A V   L  + K YRL   RF + EGG +MGHTV++++   +   G  + G K   +ELELKEG  +PW+TF+S IAVGMGQ E K F V FP D+ +  L+GK+   +  VK I ++ ++ P+TR ++  R     + EA ++    + VD+A++  L+ +C  D  K   AVSWAKFGE+STL+ +W  IKE I  EEGI+         R++N V
Sbjct:   48 PPPLRAAHAAMG-------RSALGASMQGGSGGDKNAEVTLGQYTGLSVT--LPRAEVSEAAVAKILKENAKDYRLESARFTDGEGGARMGHTVLINFVGYSPETGAELKGTKANMYELELKEGQKEPWSTFASNIAVGMGQDEMKSFVVTFPGDYAVPALQGKQVRFETYVKKIMKKVAKDPDTRQEEVQRADAVAQLEAAIERNNLEKVDQALRLELMKTCAADTTKATEAVSWAKFGERSTLDLQWQIIKEAIGREEGIKDIGAVEEFLRDSNTV 316          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A4D9CVA6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVA6_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.430e-48
Identity = 107/257 (41.63%), Postives = 158/257 (61.48%), Query Frame = 0
Query:   67 SVGLGDYKDGSITVEMPRMEISDAQVEAAL-AASKKPYRLIPVRFVEEGGTKMGHTVIMDWEAKV------------NGELVHGAKKENFELELKEGHTDPWNTFSSKIAVGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDELRVLLRQKGEATMQSRMDQAV-DEAV---KKALLASCKVDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPREVTALLRREANVVFS 306
            +V LG YK+G+++   P+  +SDA+VEA +  A+KK ++L PVRFVEEGGT+MGHTV+ DW+A               G ++  A  +NF LELKE  ++P  +F+  +A GMGQMETKVF V  P    IE  RG  A +  +V+SI  +E+   + RS +E +  +R    A +Q++ D A   EA+   +  LL + + + +K+  +VSWAKFGE S  +FKW+ I+E IA+ EGI+  EV + L RE  VV++
Sbjct:   13 AVTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTFKLTPVRFVEEGGTRMGHTVVCDWKATYVSGGDPAKHSLRPGAVLPRADIKNFVLELKEDQSEPLASFARAVASGMGQMETKVFEVAMPESATIESWRGVTAKIMLLVRSINIKENLAADGRSIEEKQAAVR----AELQAKTDAAARQEAIAHFRAILLETTQTETEKMQESVSWAKFGENSLKDFKWSLIQEAIAAAEGIDFSEVPSFLLRENPVVWT 265          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A1Y1I108_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I108_KLENI)

HSP 1 Score: 151 bits (382), Expect = 1.040e-39
Identity = 94/248 (37.90%), Postives = 137/248 (55.24%), Query Frame = 0
Query:   66 VSVGLGDYKDGSITVEMPRMEISDAQVEAALAASK-KPYRLIPVRFVEEGGTKMGHTVIMDWEAKVN-----GELVHGAKKENFELELKEGHTDPWNTFSSKIAV-GMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDELRVLLRQKGEATMQSRMDQAVDEAVKKALLASCKVDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPREVTALLRREANVVFS 306
            V + LG YKDG+I V   + E+S+ ++E AL A   K Y    + F   G  K+GH V + +E K +     G+L+ G K + FELEL+    DPW TF  +I   GMGQ E+K F + FP D++   LR   A     V  I  ++    + R +  +R  +     AT + + +  +D+ V++ LL + + D DKV  +VSWAKFGEKS  +FKWN + E++A  E IE  E  A LRR+A V F+
Sbjct:  102 VKIALGPYKDGAIKVSAKKFEVSNDEIEKALKAKLGKTYDFERINFTGSGA-KIGHMVKVSFEGKYSDGPNAGQLIRGTKADFFELELQPREDDPWKTFVEQIVKNGMGQEESKSFTLTFPADYKAVPLRNVAARFTVTVHEIGIKKMLEKDPRPEAAIRADIEADLRATAERKTNDLIDQEVRRVLLETSEADVDKVAASVSWAKFGEKSLQDFKWNLLLEEVARNEKIEFEEAKAFLRRQATVNFT 348          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A388KP71_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KP71_CHABU)

HSP 1 Score: 151 bits (382), Expect = 5.310e-39
Identity = 92/248 (37.10%), Postives = 141/248 (56.85%), Query Frame = 0
Query:   66 VSVGLGDYKDGSITVEMPRMEISDAQVEAALAASK-KPYRLIPVRFVEEGGTKMGHTVIMDWEAKV-----NGELVHGAKKENFELELKEGHTDPWNTFSSKIA-VGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDELRVLLRQKGEATMQSRMDQAVDEAVKKALLASCKVDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPREVTALLRREANVVFS 306
            V V LG YK G I V+  + E++D +VE A    + K +    + F   G  K+GHTV +++E K      +G+L+ G K + ++LELKE    PW  F  +I   GMGQ E+K F V+FP DF+   LR  +A     VK+I  ++  P +TR + E R  ++ +  A  + + +  +D  ++ ALL S + D DK+ + VSWAKFGE S  +FKWN + E++A  E I   +V   LRREA++ ++
Sbjct:  181 VKVVLGPYKGGVIKVKATKHEVTDEEVERAFKEKREKTHEFERINFTGSGA-KLGHTVKINFEGKYAEGPKSGQLIQGTKADMYDLELKERPDYPWKRFVEEITGTGMGQEESKTFMVVFPPDFKAPHLRNVKARFTVTVKAIGVKKELPKDTRPEHEQREEIKDELVAAEERKSNAQIDPEIRSALLESSEADVDKIASNVSWAKFGENSLKDFKWNLLMEEVARVENIAFEDVMPFLRREADISYT 427          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A7S1MV31_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MV31_HEMAN)

HSP 1 Score: 125 bits (315), Expect = 9.540e-32
Identity = 70/170 (41.18%), Postives = 98/170 (57.65%), Query Frame = 0
Query:  135 VHGAKKENFELELKEGHTDPWNTFSSKIAVGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDELRVLLRQKGEATMQSRMDQAVDEAVKKALLASCKVDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPREVTALLRREANVV 304
            + G K   +ELELK  H +PW+TF+  IAVGMGQ E K F V FP+D+ +  L GK+   +  VK I  R ++  + R + E R       EA+M+      VD+A+++ L+ +C  D  K   AVSWAKFGEKSTL+ +W  IKE I  +EGI+  +      R+ N V
Sbjct:    2 MKGTKANMYELELKGDHKEPWSTFTENIAVGMGQDEMKSFVVTFPDDYAVPALVGKQVRFETYVKKIMNRVAKEADARPEAEQRAEAIAALEASMERSNLDKVDQAIRQELMKTCTADTTKATEAVSWAKFGEKSTLDLQWQIIKEAIGRKEGIKDIDAIENFLRQKNTV 171          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A7R9Y821_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y821_9VIRI)

HSP 1 Score: 123 bits (309), Expect = 5.930e-30
Identity = 86/254 (33.86%), Postives = 134/254 (52.76%), Query Frame = 0
Query:   66 VSVGLGDYKDGSITVEMPRMEISDAQVEAALAASK-KPYRLIPVRFVEEGGTKMGHTVIMDWEAKVN------GELVHGAKKENFELELKEGHTDPWNTFSSKIA-VGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDELRVLLRQKGEATMQSRMDQA----VDEAVKKALLASCKVDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPRE-VTALLRREANVVFS 306
            V V L +YK G++ V   +    +A V+A L     K + L+ V F   G   MGHTV ++  A         G+ V G   ++  ++LK  +  P N F   I   GMGQME+K FPV FP+D++ E LRG   L   ++K IA +   P  T +D   R  LR++  A    +  +A     D A++ ALL  C+VD  K + +V+WAKFGE+S  ++ ++ I E+I   EG+  ++ +   LR EA++ ++
Sbjct:    7 VDVKLCEYKGGALCVRADKSVADEAAVDAELEEEMAKEFELVRVNFTGSGAA-MGHTVKLEMSATFGPGHQHAGQPVPGMTVDDLSVDLKTSNPFPLNHFVQAIVEAGMGQMESKTFPVAFPDDYQSERLRGVTCLFTIMIKEIAEKRPLPARTEAD---RATLREEIAARHDEQARRASAKRADLAIRNALLDGCEVDTQKTVESVAWAKFGEESIRDYAYSMILEEIGGREGLATQDDIKRFLREEASITWA 256          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A4D9DGH6_9STRA (ABC transporter domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGH6_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 7.840e-17
Identity = 53/132 (40.15%), Postives = 80/132 (60.61%), Query Frame = 0
Query:   56 MAGALDETKGV--------SVGLGDYKDGSITVEMPRMEISDAQVEAAL-AASKKPYRLIPVRFVEEGGTKMGHTVIMDWEAKV------------NGELVHGAKKENFELELKEGHTDPWNTFSSKIAVGM 166
            ++GAL++  G         +V LG YK+G+++   P+  +SDA+VEA +  A+KK ++L PVRFVEEGGT+MGHTV+ DW+A               G ++  A  +NF LELKE  ++P  +F+  +A GM
Sbjct:   54 LSGALNDMTGEMASTSAKGAVTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTFKLTPVRFVEEGGTRMGHTVVCDWKATYVSGGDPAKHSLRPGAVLPRADIKNFVLELKEDQSEPLASFARAVASGM 185          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A1V5HNE3_9BACT (Trigger factor n=1 Tax=Tenericutes bacterium ADurb.BinA124 TaxID=1852921 RepID=A0A1V5HNE3_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 2.360e-11
Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 0
Query:   68 VGLGDYKDGSITVEMPRMEISDAQVEAALAASKKPYRLIPVRFVEEGGTKMGHTVIMDWEAKVNGELVHGAKKENFELELKEGHTDPWNTFSSKIAVGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARR 204
            V LG Y    + V+    E+ +++VEAA+    +      +  VEEG  ++GHT + D+E +V+G L  G   +N+ LE+  G   P   F  ++ VGM Q E +   V FP+D++ E L+GKEA+ +  +  I +R
Sbjct:  118 VVLGKYF--GVEVKKDSTEVEESEVEAAINRDLRSKS--DLELVEEGSLELGHTAVFDFEGRVDGVLFEGGTAKNYSLEIGSGQFIPG--FEEQM-VGMKQEEERDLKVKFPDDYQAENLKGKEAVFKVKLHEIKKR 247          
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Match: A0A257DIN3_9SPHN (Trigger factor n=8 Tax=Sphingomonadales TaxID=204457 RepID=A0A257DIN3_9SPHN)

HSP 1 Score: 72.4 bits (176), Expect = 1.550e-10
Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 0
Query:   78 ITVEMPRMEISDAQVEAA---LAASKKPYRLIPVRFVEEGGTKMGHTVIMDWEAKVNGELVHGAKKENFELELKEGHTDPWNTFSSKIAVGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKSIARRESRPPETRSDDEL 217
            IT+E   +E+SDAQV+ +   LAA +K +     ++      KMG +V++D+E KV+G    G K E   +EL  G   P   F  ++ VG+   + KV  V FP D+  E L+GK A    VV  + +    P E ++DD L
Sbjct:   97 ITLERMTVEVSDAQVDESILKLAAGQKSFEAADKKYA----AKMGDSVVIDFEGKVDGVPFEGGKGEGMAVELGSGQLIPG--FEDQL-VGVKANDEKVLNVTFPEDYNAENLKGKPATFDIVVTEVRK----PVEAKADDNL 228          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1012.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q9_ECTSI7.600e-12573.52FKBP-type peptidyl-prolyl cis-trans isomerase n=1 ... [more]
A0A7S0VQZ5_9CRYP5.110e-4939.57Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A4D9CVA6_9STRA2.430e-4841.63Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1Y1I108_KLENI1.040e-3937.90Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A388KP71_CHABU5.310e-3937.10Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A7S1MV31_HEMAN9.540e-3241.18Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7R9Y821_9VIRI5.930e-3033.86Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A4D9DGH6_9STRA7.840e-1740.15ABC transporter domain-containing protein n=1 Tax=... [more]
A0A1V5HNE3_9BACT2.360e-1133.58Trigger factor n=1 Tax=Tenericutes bacterium ADurb... [more]
A0A257DIN3_9SPHN1.550e-1034.97Trigger factor n=8 Tax=Sphingomonadales TaxID=2044... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyGENE3D3.10.50.40coord: 111..206
e-value: 8.0E-10
score: 40.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1012contigA-nodosum_M_contig1012:56236..65017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1012.4.2mRNA_A-nodosum_M_contig1012.4.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1012 56202..65468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1012.4.2 ID=prot_A-nodosum_M_contig1012.4.2|Name=mRNA_A-nodosum_M_contig1012.4.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=310bp
MGLVFVSIDCFVLLPSAPVIPLSARRWAKPPPVFASPAAANGAPSSQRRS
QSSRMMAGALDETKGVSVGLGDYKDGSITVEMPRMEISDAQVEAALAASK
KPYRLIPVRFVEEGGTKMGHTVIMDWEAKVNGELVHGAKKENFELELKEG
HTDPWNTFSSKIAVGMGQMETKVFPVLFPNDFEIEGLRGKEALVQAVVKS
IARRESRPPETRSDDELRVLLRQKGEATMQSRMDQAVDEAVKKALLASCK
VDADKVLNAVSWAKFGEKSTLEFKWNCIKEKIASEEGIEPREVTALLRRE
ANVVFSKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046357PPIase_dom_sf