prot_A-nodosum_M_contig1011.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1011.29.1
Unique Nameprot_A-nodosum_M_contig1011.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length168
Homology
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.980e-24
Identity = 73/167 (43.71%), Postives = 97/167 (58.08%), Query Frame = 0
Query:    1 MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAVLLILLAVYTLVVAYMYDKSLANPLEIALGFYAVAAIIAEASALGRSNREYFRDSWNWLDVPALFLLSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAMIQVMVLMVSKVLQFAVV 167
            +T  P AQF I GLV +P  YYRVP +RM LDLAV L +L  ++ VV +  D  L  P E A  FY +A II E   + R    Y  D WN LD+  L L++ G + R      G++    G ALY L APL+F R+LFFAQ+    G MIQV+  M +++++F VV
Sbjct:  783 LTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPL-TPGEAAFAFYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRC---ADGDN--SWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVV 943          
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.390e-23
Identity = 69/168 (41.07%), Postives = 93/168 (55.36%), Query Frame = 0
Query:    1 MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAVLLILLAVYTLVVAYMYDKSLANPLEIALGFYAVAAIIAEASALGRSNREYFRDSWNWLDVPALFLLSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAMIQVMVLMVSKVLQFAVVM 168
            +T FP A+FII G ++ P +YY+VP LRMCLDL   + ++ ++   V        ++ LEI    Y    I+ E   +     EY RD WN LDV +L LL  G + R++    G    +   ALY L APL F RILFFAQI  SQG MIQVM  M   + +F ++M
Sbjct: 1099 ITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIVFTMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMY----GQVDDESSRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIM 1262          
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 8.100e-23
Identity = 68/168 (40.48%), Postives = 93/168 (55.36%), Query Frame = 0
Query:    1 MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAVLLILLAVYTLVVAYMYDKSLANPLEIALGFYAVAAIIAEASALGRSNREYFRDSWNWLDVPALFLLSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAMIQVMVLMVSKVLQFAVVM 168
            +T FP A+FII GL++ P +YY+VP LRMCLDL   ++++ ++   V         + +EI    Y    I+ E   +     EY RD WN LDV +L LL  G + R++    G    Q   ALY L APL F RILFF QI  SQG +IQVM  M   + +F ++M
Sbjct:  854 ITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHDAGDTFDWMEIVFTMYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMY----GQVDDQSSRALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIM 1017          
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 8.190e-21
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 0
Query:    1 MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAVLLILLAVYTLVVAYMYDKSLANPLEIALGFYAVAAIIAEASALGRSNREYFRDSWNWLDVPALFLLSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAMIQVMVLMVSKVLQFAVVM 168
            +T FP A FI  G+VALP +YY+VPL+RM LD  V    LA +T  V  +++K      E+A   Y VAAI+ EA+ + +    Y  D W      AL +  A FLAR   + S       G  LY + +PL++ R+L++AQ+  SQG+ IQV+  M S++ QF VVM
Sbjct:  635 LTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVL-LFEKGSLTIAEMAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDS-----SWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVM 796          
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 9.600e-20
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 0
Query:    1 MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAVLLILLAVYTLVVAYMYDKSLANPLEIALGFYAVAAIIAEASALGRSNREYFRDSWNWLDVPALFLLSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAMIQVMVLMVSKVLQFAVVM 168
            +T FP A FI  G+VALP +YY+VPL+RM L+  +    LA +T  V  +++K      E+A   Y VAAI+ EA+ + +    Y  D W      AL +  A FLAR     S       G  LY + +PL++ R+L++AQ+  SQG+ IQV+  M S++ QF VVM
Sbjct:  544 LTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVL-LFEKGQLTIAEVAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDS-----SWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVM 705          
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.910e-15
Identity = 60/168 (35.71%), Postives = 84/168 (50.00%), Query Frame = 0
Query:    1 MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAVLL-ILLAVYTLVVAY---------------MYDKSLANPLEIALGFYAVAAIIAEASALGRSNREYFRDSWNWLDVPALFLLSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAMIQ 152
            +T FP AQ I+ GL A P  Y+RVP +RM LDL V + +++A+ T V+ +               +  ++L  P       + V  +  E   + R+   Y  D WN LD+ +L  L+ G + R+    S     Q+G A Y L APLL  R LFF QIH  QG MIQ
Sbjct:  706 LTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKS-----QLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQ 868          
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 3.000e-14
Identity = 60/167 (35.93%), Postives = 84/167 (50.30%), Query Frame = 0
Query:    1 MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAV---LLILLAVYTLVVAYMYDKSLANPLEIALGFYAV--------AAIIA-----EASALGRSNREYFRDSWNWLDVPALFLLSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAMI 151
            +T FP AQFI+ GL A    Y+RVP++RM LDL V   +L+ L+ + L  +      +    +  + F  +         A+IA     E   + R+   Y  D WN LD+  L   + GF+AR+   T     +Q+G A Y L APLL  R LFF QIH  QG M+
Sbjct:  527 LTPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQAEQSRVDGSADEEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWT-----QQLGPAFYALSAPLLVSRALFFVQIHPLQGPMV 688          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1011.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FLB1_ECTSI1.980e-2443.71Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5LDE6_9PHAE2.390e-2341.07Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LT30_ECTSI8.100e-2340.48Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JMG8_9PHAE8.190e-2140.48Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FR83_ECTSI9.600e-2039.29Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5KJG3_9PHAE1.910e-1535.71Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JG42_9PHAE3.000e-1435.93Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1011contigA-nodosum_M_contig1011:218326..219574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1011.29.1mRNA_A-nodosum_M_contig1011.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1011 218305..219574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1011.29.1 ID=prot_A-nodosum_M_contig1011.29.1|Name=mRNA_A-nodosum_M_contig1011.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=168bp
MTLFPDAQFIIVGLVALPFTYYRVPLLRMCLDLAVLLILLAVYTLVVAYM
YDKSLANPLEIALGFYAVAAIIAEASALGRSNREYFRDSWNWLDVPALFL
LSAGFLARLWSTTSGNDLKQVGEALYLLVAPLLFPRILFFAQIHSSQGAM
IQVMVLMVSKVLQFAVVM
back to top