prot_A-nodosum_M_contig101.24.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig101.24.1
Unique Nameprot_A-nodosum_M_contig101.24.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length826
Homology
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 9.010e-44
Identity = 206/666 (30.93%), Postives = 267/666 (40.09%), Query Frame = 0
Query:    3 APQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTRLDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEANVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAVSXXXXXXXTDSMKMKLTMASXXXXXXXXXXXXXXXXXXXLHAMESSPATGDLPYRRASSQEWAHSGV-------------------------------QVDDYDRLEATESLTRVEHEHE-------------------------EAYXXXXXXXXXXQRYGVRGNGA-----------PGVVFGAE-----GVHCAGSVSDVSSVEAAMAATPL-----------------------------------------GRLVKLMGELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRAD----------------------------------DARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL-RGGNPDGHATELA-----------------DHEEWQAYREAAMAGLVRKAMLGYGGAV------------------------------GPADTAATSA--SRRLQVAMAAVGCMVTRREI 471
            APQS+ +DGSLV VK FLNDGR +PGM+RV+ L+APD  V ERRFR+R   + +    G      A EEG      ERA+ LCMELVH EGC VA+EAN +L R    D+  +       +++RLA  L  +L+G ALEAWRR  AAV                 + +                     +  +  ++G    +R + +  A SGV                                VDD   + A       + E E                         EA           Q+  ++  G            P  +  +E          G    V   EA   + P+                                         GRLV+L+GELA G KV+V  AV+ L+GDGKAL RLLDLGVLRL PQT S ++ A R D                                   + S+DVL EA  AFQVGAATP+MAGVF+IL+GC G+EEQAIA A+  L RGGN +                        + EEWQA+REA+MA LV +AM                                     G +  ++TSA  +RRLQ A+AAVGCM T  EI
Sbjct:  193 APQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFAAAPQQPTQGG-----AGEEG------ERAVTLCMELVHREGCSVADEANEILTRTDFSDDSPD-----KLSAARLA--LEESLDGFALEAWRRVGAAVESTAAIAPRGFAGTDAVVGTPGAVSSAALASNQRAPVPP--STSAGGSSGATSAKRNTQEGRAESGVTRTRTSXXXXXXXXXXPAGGGEEGGVQTANHDVDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVVPKDGKRGHADSSAEAEATREELQQQKQQESLQDEGKEPPAADITPDEPASLEASELSSFLSPRARGEEEAVYWEEAESLSAPVVAEEPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTASILSSLSLSLPGSSLDASHSRPGRGSTSADVLAEAGAAFQVGAATPLMAGVFSILKGCQGVEEQAIAGAIHFLSRGGNENAAXXXXXXXXXXXXXXXXXXXFEEESEEWQAHREASMAMLVHRAMTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSRRSSTSAYRTRRLQTALAAVGCMTTWMEI 838          
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.530e-41
Identity = 182/541 (33.64%), Postives = 227/541 (41.96%), Query Frame = 0
Query:    3 APQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTRLDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEANVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAVSXXXXXXXTDSMKMKLTMASXXXXXXXXXXXXXXXXXXXLHAMESSPATGDLPYRRASSQE--------WAHS-------------------GVQ----------------------------------------------VDDYDRLEAT---------ESLTRVEHEHEEAYXXXXXXXXXXQ-RYGVRGNGAPGVVFG--AEGVHCAGSVSDVSSVEAAMA-------------------ATPLGRLVKLMGELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRAD----------------------------------DARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL-RGGN 404
            APQS+ +DGSLV VK FLNDGR +PGM+RV+ L+APD  V ERRFR+R   + +    G          G ++G  ERA+ LCMELVH EGC VAEEAN +L R    D+  +       +++RLA  L  +LEG ALEAWRR  AAV                 + +                     +M +   TG   Y + ++QE        W  +                   GVQ                                               D    +EAT         ESL R   E   A                    G  G V+   AE +       + SS  +A                     ATP+GRLV+L+GELA G KV+V  AV+ L+GDGKAL RLLDLGVLRL PQT S ++ A R D                                   + S DVL EA  AFQVGAATP+MAGVF+IL+GC G EEQAIA A+  L RGGN
Sbjct:  207 APQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFVVAPQQRSQGG---------GGEEG--ERAVTLCMELVHREGCAVAEEANEILTRTDFSDDSPS-----KLSAARLA--LEESLEGFALEAWRRVGAAVESTAAIAPRGFAGAAAVVGTPGAVSSAALASNQRAPVPP--SMSTGGRTG-ATYAKRNTQEGRAESGATWTRTSPGSGSEGDGDPAGGGEEGGVQSANHGFDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVGPNDGKSGHADSSVEVEATPQELQQKQQESLQREGKEPPAADDTADEPAILEATELSPSSGGGEGTVYSEKAESLSAPVVAEESSSSYSAXXXXXXXXXXXXXXXXNPGDPATPVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTSSILSSLALSLPVSSLDASHSHPRTGSTSPDVLAEAGAAFQVGAATPLMAGVFSILKGCQGAEEQAIACAIHFLSRGGN 726          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G086_ECTSI9.010e-4430.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKL7_9PHAE1.530e-4133.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..744
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 796..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 778..794
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 752..769
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig101contigA-nodosum_M_contig101:395233..402770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig101.24.1mRNA_A-nodosum_M_contig101.24.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig101 391662..404473 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig101.24.1 ID=prot_A-nodosum_M_contig101.24.1|Name=mRNA_A-nodosum_M_contig101.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=826bp
MTAPQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTR
LDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEA
NVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAV
SAAAAASSTDSMKMKLTMASKMASAMPLEEAMGLEEDVGLHAMESSPATG
DLPYRRASSQEWAHSGVQVDDYDRLEATESLTRVEHEHEEAYQQQRQQQQ
RRQRYGVRGNGAPGVVFGAEGVHCAGSVSDVSSVEAAMAATPLGRLVKLM
GELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRA
DDARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL
RGGNPDGHATELADHEEWQAYREAAMAGLVRKAMLGYGGAVGPADTAATS
ASRRLQVAMAAVGCMVTRREIEAAIQKEHFDATQGGLVPGLLKQHHRRFH
PAAPDGQEFASPSWSSSLPSSPSSIPNEATGKTSDGHESADASASSQPHA
AGRASEESEEPREDAQDEGAPQDEISKAADSAESEGAVGVDSTDGGELKG
GAEANTLAEDGRGVIASSADAAAADFGTGPRHEATAPATGDHVSRPARGE
DVGLAAPGDEADGALARDGDGVESEAATNRVHVPAEGATAVEDDVPSTTL
SSTTQQRESTKSPSSDESLSAGEAPGNSPINSVTVANKAQNERDCASSQP
DDRVDQDQAGVSSSGVDPTMSGGDAVHRDGEGVGRDDHDNQGPQDADPVP
KTSSERSFWNWITRSRPSNGKDGQS*
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