Homology
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Match:
D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)
HSP 1 Score: 239 bits (611), Expect = 1.960e-60
Identity = 233/695 (33.53%), Postives = 295/695 (42.45%), Query Frame = 2
Query: 197 EDVPAAVEAVLRWCWTITGGRRLAHVVMTAPQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTRLDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEANVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAVSXXXXXXXTDSMKMKLTMASXXXXXXXXXXXXXXXXXXXLHAMESSPATGDLPYRRASSQEWAHSGV-------------------------------QVDDYDRLEATESLTRVEHEHE-------------------------EAYXXXXXXXXXXQRYGVRGNGA-----------PGVVFGAE-----GVHCAGSVSDVSSVEAAMAATPL-----------------------------------------GRLVKLMGELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRAD----------------------------------DARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL-RGGNPDGHATELA-----------------DHEEWQAYREAAMAGLVRKAMLGYGGAV------------------------------GPADTAATSA--SRRLQVAMAAVGCMVTRREI 1690
EDVPAAVEAVLRWCWTITGGRRLAHVV+ APQS+ +DGSLV VK FLNDGR +PGM+RV+ L+APD V ERRFR+R + + G A EEG ERA+ LCMELVH EGC VA+EAN +L R D+ + +++RLA L +L+G ALEAWRR AAV + + + + ++G +R + + A SGV VDD + A + E E EA Q+ ++ G P + +E G V EA + P+ GRLV+L+GELA G KV+V AV+ L+GDGKAL RLLDLGVLRL PQT S ++ A R D + S+DVL EA AFQVGAATP+MAGVF+IL+GC G+EEQAIA A+ L RGGN + + EEWQA+REA+MA LV +AM G + ++TSA +RRLQ A+AAVGCM T EI
Sbjct: 164 EDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFAAAPQQPTQGG-----AGEEG------ERAVTLCMELVHREGCSVADEANEILTRTDFSDDSPD-----KLSAARLA--LEESLDGFALEAWRRVGAAVESTAAIAPRGFAGTDAVVGTPGAVSSAALASNQRAPVPP--STSAGGSSGATSAKRNTQEGRAESGVTRTRTSXXXXXXXXXXPAGGGEEGGVQTANHDVDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVVPKDGKRGHADSSAEAEATREELQQQKQQESLQDEGKEPPAADITPDEPASLEASELSSFLSPRARGEEEAVYWEEAESLSAPVVAEEPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTASILSSLSLSLPGSSLDASHSRPGRGSTSADVLAEAGAAFQVGAATPLMAGVFSILKGCQGVEEQAIAGAIHFLSRGGNENAAXXXXXXXXXXXXXXXXXXXFEEESEEWQAHREASMAMLVHRAMTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSRRSSTSAYRTRRLQTALAAVGCMTTWMEI 838
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Match:
A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)
HSP 1 Score: 233 bits (593), Expect = 3.010e-58
Identity = 209/570 (36.67%), Postives = 255/570 (44.74%), Query Frame = 2
Query: 197 EDVPAAVEAVLRWCWTITGGRRLAHVVMTAPQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTRLDRSTKPADDGADVDADAEEEGTKDGGLERAMALCMELVHGEGCGVAEEANVVLRRAVSVDEGKNGKYKGNQTSSRLAVALNGALEGIALEAWRRAAAAVSXXXXXXXTDSMKMKLTMASXXXXXXXXXXXXXXXXXXXLHAMESSPATGDLPYRRASSQE--------WAHS-------------------GVQ----------------------------------------------VDDYDRLEAT---------ESLTRVEHEHEEAYXXXXXXXXXXQ-RYGVRGNGAPGVVFG--AEGVHCAGSVSDVSSVEAAMA-------------------ATPLGRLVKLMGELAGGEKVTVGRAVSVLNGDGKALGRLLDLGVLRLSPQTISGAMSAVRAD----------------------------------DARSSDVLPEADEAFQVGAATPVMAGVFAILQGCSGLEEQAIARAMRVL-RGGN 1489
EDVPAAVEAVLRWCWTITGGRRLAHVV+ APQS+ +DGSLV VK FLNDGR +PGM+RV+ L+APD V ERRFR+R + + G G ++G ERA+ LCMELVH EGC VAEEAN +L R D+ + +++RLA L +LEG ALEAWRR AAV + + +M + TG Y + ++QE W + GVQ D +EAT ESL R E A G G V+ AE + + SS +A ATP+GRLV+L+GELA G KV+V AV+ L+GDGKAL RLLDLGVLRL PQT S ++ A R D + S DVL EA AFQVGAATP+MAGVF+IL+GC G EEQAIA A+ L RGGN
Sbjct: 178 EDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFVVAPQQRSQGG---------GGEEG--ERAVTLCMELVHREGCAVAEEANEILTRTDFSDDSPS-----KLSAARLA--LEESLEGFALEAWRRVGAAVESTAAIAPRGFAGAAAVVGTPGAVSSAALASNQRAPVPP--SMSTGGRTG-ATYAKRNTQEGRAESGATWTRTSPGSGSEGDGDPAGGGEEGGVQSANHGFDDGAAVAAGAGPGDDKAESEVPGLSSPAAAVGPNDGKSGHADSSVEVEATPQELQQKQQESLQREGKEPPAADDTADEPAILEATELSPSSGGGEGTVYSEKAESLSAPVVAEESSSSYSAXXXXXXXXXXXXXXXXNPGDPATPVGRLVELLGELADGGKVSVHHAVAALDGDGKALARLLDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTSSILSSLALSLPVSSLDASHSHPRTGSTSPDVLAEAGAAFQVGAATPLMAGVFSILKGCQGAEEQAIACAIHFLSRGGN 726
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig101.24.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.96e-60 / Id = 33.53 Expect = 3.01e-58 / Id = 36.67 Sequence D7G086_ECTSI A0A6H5JKL7_9PHAE
Match Name E-value Identity Description
D7G086_ECTSI 1.960e-60 33.53 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5JKL7_9PHAE 3.010e-58 36.67 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 4458 Hectar predicted targeting category other localisation Exons 10 Cds size 2478
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866368.5560558-UTR-A-nodosum_M_contig101:391661..391786 1680866368.5560558-UTR-A-nodosum_M_contig101:391661..391786 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig101 391662..391786 + 1680866368.5658982-UTR-A-nodosum_M_contig101:392757..392826 1680866368.5658982-UTR-A-nodosum_M_contig101:392757..392826 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig101 392758..392826 + 1680866368.5739923-UTR-A-nodosum_M_contig101:394456..394536 1680866368.5739923-UTR-A-nodosum_M_contig101:394456..394536 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig101 394457..394536 + 1680866368.581972-UTR-A-nodosum_M_contig101:395229..395232 1680866368.581972-UTR-A-nodosum_M_contig101:395229..395232 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig101 395230..395232 + 1680866368.6640067-UTR-A-nodosum_M_contig101:402770..404473 1680866368.6640067-UTR-A-nodosum_M_contig101:402770..404473 Ascophyllum nodosum dioecious UTR A-nodosum_M_contig101 402771..404473 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680866368.5970845-CDS-A-nodosum_M_contig101:395232..395315 1680866368.5970845-CDS-A-nodosum_M_contig101:395232..395315 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig101 395233..395315 + 1680866368.6052477-CDS-A-nodosum_M_contig101:396002..396233 1680866368.6052477-CDS-A-nodosum_M_contig101:396002..396233 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig101 396003..396233 + 1680866368.6132588-CDS-A-nodosum_M_contig101:396682..397352 1680866368.6132588-CDS-A-nodosum_M_contig101:396682..397352 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig101 396683..397352 + 1680866368.6221764-CDS-A-nodosum_M_contig101:397633..397750 1680866368.6221764-CDS-A-nodosum_M_contig101:397633..397750 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig101 397634..397750 + 1680866368.635035-CDS-A-nodosum_M_contig101:399549..399816 1680866368.635035-CDS-A-nodosum_M_contig101:399549..399816 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig101 399550..399816 + 1680866368.644836-CDS-A-nodosum_M_contig101:401167..401230 1680866368.644836-CDS-A-nodosum_M_contig101:401167..401230 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig101 401168..401230 + 1680866368.654574-CDS-A-nodosum_M_contig101:401723..402770 1680866368.654574-CDS-A-nodosum_M_contig101:401723..402770 Ascophyllum nodosum dioecious CDS A-nodosum_M_contig101 401724..402770 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig101.24.1
>prot_A-nodosum_M_contig101.24.1 ID=prot_A-nodosum_M_contig101.24.1|Name=mRNA_A-nodosum_M_contig101.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=826bp
MTAPQSMVMDGSLVLVKTFLNDGRPSPGMIRVVGLDAPDVKVTERRFRTR back to top mRNA from alignment at A-nodosum_M_contig101:391662..404473+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig101.24.1 ID=mRNA_A-nodosum_M_contig101.24.1|Name=mRNA_A-nodosum_M_contig101.24.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12812bp|location=Sequence derived from alignment at A-nodosum_M_contig101:391662..404473+ (Ascophyllum nodosum dioecious)CGGACCGGCAGCGGAGGCAGTGGAAGAGGGGTGCGGGTGTGGCGAGGGAG
AGGGAGGGAGAGCTGTCGGATATCGGTGCGATTCTCGATACGGCGACCGC
TGCCCTGGAGGAAATCAGGGATCAG GTACATACAGAAGACGTAAGGAATG
TACCTCGAATTGGAAAACAGAGATAGGTACGTACAGAAAAGACATAGGGA
ATGTACCTCGAATTGGAAATCAGAGATAGGTACGTACAGAAAAGACGTAG
GGAATGTACCTCGAATTGGAAATCAGGGATCACGTACGTACAGAAAAGAC
ATGGGGAATGTACCTCGAATTGGAAATCAGGGATCAGGTACGTACAGAAG
ATATGAGGAAAGTACCTCGAATTGGAAAACGAAGTTCCTGGCCGGTAGTA
ACCGATAACTATAACTATAACTATCGCTAACTATCGCTATAATGGTCATA
GTGTGCATGTAGTAATCGCTTCTTCGCATCCCGTGCGCTTTCCCCCGCAC
AAGATATTTATTAGCGCAGTCCTGTAAACGTGGTCCCTTCTACCCACTTA
GGGAATCGGGGTATTAACAATAGTGCGATCACGCAAGACGCAGCACGTCT
TTGTGCTCTTTGTGCCCGAGTGGCGGCCTCTGTGAGTGTCGAGCTTGCTG
TTGCCTTAATCACACGCCGCAAGAAGAGAGGGTTGGAGTCTAGTCGACCG
TTCATGGAGCCTCCTTCGCGAAGCGCTCCTGCCTTGGCACACTTGAGCTA
CAGTACTGTACACTCCGCTACAGAGGAGTTGTATCGCGATCGTCTTGTTA
CGCCCGTGCATTTTTTTTGTGTTTTTTCACCAAAAAAATAGCAAAAAACG
TTGTCGGAAAACGAAAGTTGGAAAATGGAAAACGAAAAACGATGGTAACC
CCCCTCCACCCCGCTTGTAAAACGCACTCTCAACGCTAACTTTCGTACTG
CATTATACAGACGACGCTCGCAAGGTTTCAACCTTGCTATCGCCCGTACC
GATGGATGTCGCTCGTCCGCTCATTGCTCGTCGAATGTAAAGAACAATGT
CCAAAAACAATGTCGAATATCGCTTGTCGATCGTCGCTTGTCGCAGGCCT
ACGACCCTCGAGACCACCTTCCACCCGTCATCGTGATCGACGGTTTGCTG
GAGCGCGTCAGGCGC GTCAGGCCCGGTCATGGTGGTTCTGGAGTTGCGCA
CCCTATAATTTCGCGTCTTTCTTTCGTGTCAGATTCATGCATCCAATCAG
TCGGCTACTATTTAATTAATAGTCCTGACGTTACTCTCCGTACATTTTCC
CGGCCTGGATGCGACAAAGCCAGTCTGTCTACCTTGGTTATTTGTAATTT
AACCCAAAGTACGCCGGTACTTTCAATATGCCCACTTCATACCAATAGTG
GGTGTGGGAAAGAGAGGCGAATATTAATTGGTCCACATCATGGTGACCTG
CCAAGGCAACACTCCCTCGGAACTACCTTGAGGTTTACTGGCCCCGTGCC
GGCGGAATCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCAAT
AAACTCGGGACTGACCCGATGACGTATGGCGGTCATAAATGAATAAATGG
ACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAG
CCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAACCCG
TCTCGCGAGACCAAATTCTCAGGCGCGAACGCGGACAGGGGAATATTAAT
TTCCCTGTTCAGCCGACCACGAGCAGGATTGACAACCTTACCCGGTTGAT
TCATGCTCTTGCTATATGTGTGACCATATATACATATATATATAGTATAT
AGTATATAGAGGAGAGCTGTTAATAATGTTGTCGAGCGGCGTATGCTTCT
CTTTGCCGTTCCCGTATTTGGGTGCTTATATATTGCAGTACTCTATAGTG
GACGGCCAACTCGAAGGCGTCGTATTGATGAGAAGCGACGATCTCCATCG
TGAGGGTACCGTACGTAGTGGCGTATGGTGGTGGGCGTATTAAAGACCCG
GGGATAAGCCTTCCGCCGTCCCCGCCCCCTCTGTTAGACACGTGTCAAAA
CATCTCACCGAGACCCTTCCAAGAATCGGCAGTGTTTCGCTCTTATATTT
TGTCTGCCCAATGGTGGATGAAAAATATGTCGAGCGATAGGGGATACAGG
GGACAGGGGACTCTATCATACTGCTGATGTACATAATTGCACGCCTACGA
TAGTCTACAAGGCAGGCAAGCGAGCGAGCGTTTTCTGCACACGGTCCCAC
CGAAAAAAGCGCACCAAGACTGTGTGCAGGTAGTACAGTACAGGTAGTAC
ATACATGACGTCCATACATGACGTCCTCAGACCTGTACTACCTGTCCTGT
ACTGTACACTATTATAGCGGTCATACATGACGTCCATACATGATCAGTCC
TCAGACTAGAGACTGGCTCTACTCGTGTTTATAGTAATAGTAATAGTAAT
ATAGACTACTATTTAATATATATAGCCTATATATTGAAGTTCTCTTTACA
ATATTTGAAAGAAAAAATTATAGGTCTTTTAATATCTATAAAAAATGTTA
ATATATTGTTTCTTGGGGTTTACCAATACAGTAATAAGCTTTGCTGTTGG
TGAAAAGTTCGGTTTAAAATGTATAATTTATGTAAATAGAACATACATTT
TTTTCTTGTTTTTTTAAATGTTTTTTCGCGGTCTGTCGTCGGCGTCCGTT
CGGCGTCTGTCCGTCGTCTGTTCGGTGTTGGATGCTCGACTCCAGGAGAA
GACGTACCCGCCGCTGTTGAAGCCGTGCTTCGGTGGTGCTGGACGATCAC
CGGCGGACGCCGACTAGCCCACGTG GTACGACACTATCCGCGGTGTAAGA
TTCTTCTACTAATACTATATAATACGATATAATACCATACTTTTTTCTTT
TTTTTTCTTTCATCTCACTTATAGCCGGTGGACCTCATCATTACCATCCT
GCCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCCTTACA
ATTTTTTATCGCGATGCAAGTTCAGCACTCTTACAACTCGTCAACCAATG
GTTGAATTTTACTTACTCACGCTCCCACGCTTTCCGTTACGAAAGAAAAA
ACACAAATCCTACTTTGGTAAGAATCGAACTCACGACTTCCGTACTAGCA
GATGTGCAGCTTACTTACTAGACCACTCGGGCGACGAGCTACCAGGTACG
TATTACTATTACTAATAAACTACAGCGGTAGGATGGTATCCTCCTCCCTC
CACGTGTGGTAGGGATGCATCGGAGCATGGTGTCGCTTACTGCACCGACA
CTTTTATACTCATTTCGAAAGCTGTGCTTTTGTTATATTTGCAACTACAT
TGTACAAAGTACTTGGTCAGTTTGACCTTCTACTTGCTCTTATTGTTTAC
TTTTTGTTGTAAAAGTCTAATGCTGGAGGAGGATATTATTATCGTAGAAG
AGGTTTTCCACTTGGAGATAACGCAAGTTGTTGTAGTCGTTTTTTAATCG
TAACTTACTGTGACTCAGGTG ATGACCGCACCGCAGTCCATGGTGATGGA
TGGTTCTCTCGTACTGGTCAAGACCTTTCTCAACGATGGCCGTCCGTCTC
CTGG GTGAGCCTACTGACTTCACCGATCTGACTTACCTTACGGCCCTCAC
TGCCCTGACTGCAGTGTATATAGTGTAAAGTGTCAAGTGTATATAGTGTA
TATAGTGTGTAGTATATAGTGTCAAATGTATATAGTGTATATAGTTTATA
GTATATAGTGTAAAGTGTCAAGTGTATATAGTGTAAAGTGTCAAGTGTAT
ATAGTGTAAAGTGTCTAGTGTATATAGTGTAAAGTGTAAAGTGTATATTG
TACAACATATAGTGTTCGGGGCTTTCGCTCAAAATCTCCGCCGGCCACCA
TGGTAGGTCGGGTACAACAGTTCAGTAGTTCAAGCATTCGATCGCTTCCC
TACCAAAGAGGGCATGTGTTCCGTGTGTGCGATGTCACCACTATGTATTC
ATAGGCCAAGTGTACTTAAATTGTGAGGCGAAGTGTGCGAAACTTAAGCA
TACTCTAGACACACGCACCCGAAAAAAACAGCGCCCTTTTTACGCCCGCC
TGCAAGCACCGGTGTCTAAATGTATCTACATGCGGTATACAAGTATAACA
GAGGTCCTCCCATCGTTATCAGTTGGACTCCTTCGCCCGCGGTGTCCCAC
GAGGGTTATTTCCTCAACTGTTCTTTCCGAACTGTGTCGCTTGTCTTTTC
TCGAATGTCGAACGTTACTGCATCTAATGGTGTATAATCAGGATGATTCG
AGTCGTCGGTCTCGATGCTCCAGACGTCAAAGTTACGGAAAGGCGATTCC
GAACACGCCTCGACCGCTCTACGAAACCTGCGGACGACGGAGCCGATGTA
GATGCCGATGCTGAGGAGGAGGGCACGAAGGATGGGGGCCTCGAGCGCGC
CATGGCCCTGTGCATGGAGCTGGTTCACGGCGAAGGTTGCGGCGTTGCCG
AGGAAGCCAACGTGGTTCTCAG GTGAAAGCGTGCGCTGGCTGTGGGGTCA
GCGCCGAGAGACCAAACGGAGACAGAAATGCATGACAGGCCGTCACGCCT
CACGAATGGTGTTGATGGCACCGTAATGGTGTTGATTCCCGCCGCGACAT
GGTGGCAGGGACGTGGTAGTTCTAGACCCCAGTGATCGGCGGACCTGACG
ACGTGTTGCCGAGTTCCATGGGCCGCGACCAAACGAAAAGTAAACGGGCG
GGATTTCCTTGTCCAAACGGCGTTGATCGGCGCGCTTGTAGTATACGGTG
GCTCTTTTTTTGCCCTTTATTGGTTTGAAGTACTTACAGCCGTTGGTAAG
ATTCACTATTTAGTAAGCATGAACGTTGTATCGGGTCTACGGAGATCTCT
ACTACCAAAAGTGCATATTTTGGACAGGGTTGGTAAAAGCCGCCTCCCGA
ACGTCTGTGGGTGCCTTACAGACGAGCAGTGTCCGTGGATGAAGGCAAGA
ATGGCAAGTACAAGGGCAACCAGACATCTTCTCGACTGGCGGTGGCGCTA
AACGGAGCCCTCGAGGGCATCGCGCTGGAGGCTTGGCGACGCGCAGCCGC
CGCGGTATCTGCGGCGGCGGCGGCCTCCTCCACCGATAGCATGAAGATGA
AGTTAACGATGGCATCGAAGATGGCGTCAGCGATGCCTCTGGAGGAAGCG
ATGGGGTTGGAAGAGGACGTCGGCCTTCATGCCATGGAATCCTCTCCCGC
CACGGGCGACCTTCCGTACCGAAGAGCGTCGTCGCAAGAGTGGGCTCACT
CCGGAGTCCAGGTCGATGATTACGACCGCTTGGAAGCGACGGAGAGCCTA
ACTCGGGTGGAACACGAACACGAGGAGGCATATCAGCAGCAGCGGCAGCA
GCAGCAGCGGCGGCAGCGGTACGGCGTTCGAGGAAATGGTGCACCTGGGG
TGGTCTTTGGTGCTGAAGGCGTACATTGCGCGGGTAGTGTCTCCGATGTC
TCGAGCGTGGAGGCCGCCATGGCAGCGACACCGTTGGGACGCCTGGTCAA
GCTCATGGGAGAGCTCGCCGGTGGCGAGAAAGTGACCGTGGGTCGCGCAG
TGTCGGTCTTGAACGGAGATGGAAAGGCGCTGGGCAGGCTG GTGAGATTT
GGTGTTCGAGTGGTATTTACGATCACTTTGTCTTCATTAAGGGTCGTTGA
CTTAATTGGCGTTTGGTGAGGTATAAATAGGGCTGTTGCCATCGACGGTT
GTGCTGCCCCTCTACCGGTAGTCTACACGGACAAATATTTAGGGCTGATG
TCGTGTCACCGAAATGAGCCTGGAGTCCACGGGGGGGAATAACCTCTTGC
TAACCCCAATAAACTCTCTCAACCCTCGCTTCGTTCCCACCTATCGCGTG
TCTGATTGCGATTGCCTCCTAGCTCGACCTTGGAGTGCTTCGCCTATCCC
CGCAAACGATCTCGGGCGCGATGAGCGCTGTGCGTGCTGATGACGCGCGC
TCTTCTGATGTTCTGCCAGAGGCTGACGAAGCGTTCCAG GTGAGCACGGC
ATCGGTTCTGCACCTTTCGATTTTCTTGCGGCTTTCTTGTTTATTTTTGT
TATGTACGAGTTCGTGGTGCGTAGTTTTTTTGTTTTTTCTTGGTTGCGTG
CTCGTTATGTATAGTGCGTATGTCAAGCAGGCGAAGCGATCGTGGTACTT
ACGACTTTATAGTGTTAACTAATCACTACAGTGTGTTTTTTCTATCATTG
ATGGTGTAAGTGTATGGTGTACAGTATCCAAGGATACAAAAGACAAGGTA
ACTGTGGCCGCAGAGCTACGTGTATAATGTATCCGAATCCCTTTGAAGAT
ACGTTTTACGAGAGTGTAATGAAGTTTATTTAGTTGTTGTGGTTGATCCA
CACATTCAGCGCATTACTCTTGAGCTGAAGAACTATGATACGGTGACACA
ACAAGTCAGCCATAGACCAATCGAATGCCAGTCCCGCTCGTGGTCACAAA
GAGGTACGAAGGTTAACGGGTCACGTCATGGCGACAACCCGCTACTAAAA
CCAACAGGGATCCAAATCGCGACAAAATCCTTGCCAGGTTTTACCACCTT
AAAGAAAACGTATCGGCGTCAAGAATATGTCTTTGGGTACGAGCTACAGC
TTCTACTGTCTGGAGTTCTGCCGATTCTTCAAAAGCTGAATTACAAGCTA
CAGAGAACACTGTCTGAACGTGATGCCCATCTACCAAAGTACCAAACTCA
TCAAAAGGGGCTCAAAATGTTTTCTAGCTATCGGAGGGTTACACGAAGAC
AATTTATGCGGGACTTTACAAGGGATGGCACCGACCAATGTCAAAACGGT
TCATCAAACCTCCTTACTCGATTTCGAGAACAACCCCGAATGAACACTTC
GGATTGTTGTCGCCTACCAACGGCCAGCGTTTTCAGCAACAAAGCGGACA
AATCACGCTCCAATCATTTTTGATGAAGAAACCCAAGTTTCTCAAGGCCA
CACGTCACCCTGAAAAAAAAGGAAAATCGTAGTACCAACGTTAATAGTGG
TGGAGCCCTTAAGCTGGTGAAGACCGCGCGCTTGCCATCATCCAGCCGTC
CGAAGCCCTGTGCATCCCTTGAGAACGCCCCAGAAATCTTGTCCATTCGT
CGTTCCTTGTTTTCCTTGGTGAGAAGAAAACAGACCATGGTCAGATCAGC
TTTTCCCTCGGAAACTTCCTGATTCTCGCCTTCGGTTCTCGCGCACATGG
GTTGAGCACTCCCCTGGCTCGTCGAATATGGAGTTACCCTCCGCCCTCGC
CGAATCTGGTGCTTTCTCAGCCGATAAAGCGTGCCACGATACGCTTGCGG
CGTGCTGCGGTGCCCTAAAAGACTTTCCGCATAATTTTCCCTACCTCTCG
CGGGCCAACATTAATACATTAATACAATACCTCCCGAAGGGCACCAAGTT
GGAGCTCGCAAGAGGTACACCTGGTGAACACCATCCTTGGCCATTCAAAC
CGCCGCCGCGTCTCAGCCGACCGGCTGAATCGCGTAGACAGCCAGTTGGT
TGCATCTCTTGAGAGTGAGTCCAGCCCTATACCCGCCGGAAAGACCCTCC
CACGATCATACCCCAAATCGGAGGGAGAGGGCACGAGATGATATGATTTC
TACCTAGCACACCGAATACTGTACTGTACGTGAATCATACACAAAGCAGA
AGGTGACAAGTTTCAGAAATCAAGACGATCGGGTGCAGTTCTAGGAACGA
TTGCATCTCCGCGGTCGTTCTTGTTTCTCTATGTACGTTAAAGCGATGTA
TCAATGCGGAAGCACCTGATGACTTATTTGTGTTGCAGGTCGGAGCTGCG
ACCCCCGTCATGGCCGGTGTCTTCGCCATCCTGCAAGGTTGCAGCGGGCT
CGAAGAGCAAGCTATCGCGAGGGCAATGCGCGTCTTGCGGGGTGGGAACC
CCGACGGTCACGCGACGGAGCTGGCCGATCACGAAGAATGGCAGGCGTAT
CGAGAGGCCGCCATGGCAGGCCTCGTGCGAAAAGCTATGTTGGGCTACGG
AGGAGCTGTAGGGCCCGCGGATACCGCTGCGACCTCTGCTTCACGCCGCT
TACAG GTGCTGCACCTTTCACCTCTTTCTATTAATAGAGCTTTGACACCA
CTGCCGACACTATGTCCTTTATTAACAATACGAGTGCAAAGAGTTAGATA
CGTTGACTCGTCGCCCGAGTGGTCTAGTAGGTAATCTGCACACCTGCTAG
TGCGAAAGTCGTGAGTTCGATTCTTACCAAAGTAAGATCTGTGTTCTTTC
TTTCGTAACGGAAGCGTGGGAACGTGAGTAAGTAAAATTCAACTAGTCTA
GTGGTTGACGAGTTGTAAGATTGCTGAAGTTGCATCGCGATAAACAATTG
TAAGGCGTGCACCGGGGAGAGATGGGAAGATCATCAAGTGACCATAGGCA
GGATGGTAATGTGAGGTTCATCGGCTATAAATGAGATTAAAGAAGAAGAA
AAAAAAGTGCGGTGCTACTCTCGTGCCGCTGCTGCTGCGGACGTACTATT
AATAATCACGGCGGACGCACTAAGTACTACCTGGTAGTACTTGTCAATTG
TTGACCTCATGGTACGTGCCTGTTTGCTTTTCCTGGAGCGTGGTATTAAC
TTGTAGAAGACGAGGGGACCCTGTTGGCAGTCAAGTATCTCAAGATCATC
TCATCCACTCAACAAATCAAGAGATCAATGTATCAATCGAATCGCTGGTG
ATGGGATCAGGAAACCATGCGCGTGGAATTGTCAAACGGTCCACTCTATG
GTCTTTTCGTTTCCCCGTCCCCGAGTAACATGGTTGATACGACAGAAATA
TGGCTCCTTTTTTTTTTCTTTTTTTTTCTTCTTTTCTTTCATCTCACTTA
TAGCCGATGGACCTCATCATTACCATCCTGCCTGTGATCACAAAGGATCT
TCCCATCTCTCCCCGGTTCACGCCTTACAATTTTTTATCGCGATGCAAGT
TCAGCACTCTTACAACTCGTCAACCAATGGTTGAATTTTACTTACTCACG
TTCCCACGCTTTCCGTTACGAAAGAAAGAACACAAATCCTACTTTGGTAA
GAATCGAACTCACGACTTCCGTACTATTAATAGCATATGTGCAGCTTACC
TACTAGACCACTCGGGCGACGAGCGGCAAACCACAATAATACCACAATAA
CATGGTTGACACGGAAACAACGTCATCGATTATTGAGATTGATGGTGACA
TGTTTAAGATTCTATTTTGAGCCCATTGTCGATTATCAGAAGGCTGTAAT
AATAATTGATAGTAACATGGTTGATACTGGCTATGTATTCGAAAGTTACG
GTACTACTGTAGAGTAGTAATCTTAGCGAGAAATCATTTTTAGTTGTCCC
ATGTTTTCCCATGTTGTCCCATGAAATTTGCGTGCGAAATGAATCAAACG
AAACAGGTGGCCATGGCAGCCGTGGGGTGCATGGTGACAAGACGCGAGAT
CGAAGCTGCAATCCAAAAG GTATTAGCTACAGTTACAGCTACAGTGTTTT
TTCCCTGATTGCTTTTGCTTCTCTTAGCCGTTGTGTCTCTGACCGAGCCT
TATGCTTTACATAAATGGTCTAAACAGCAATATCAATACGATCGATAGTC
GAAATAGATTTACCTTTTATGACCGCTCGTGTGGTCAATGTCTGAGAGAT
ATTGAAGGATACAAAATATCTTGTCTTCGGGTATATCACCTATATCCACT
TCCCTACCAGGTATATTTTACGCATCGAAATCCCTCTGCCCCCTTGTCGG
GCTATCTCCATTTCAATGTTTCAAGCGAGATATCCCGAGGTACTGCATAC
GTATACCGGTATAGCGTAAGTGGTAAATCTAAAGTTGCATGTTCCAAATG
AAATGTCTCCCGAGGTCCTTGCTGCCGCTCAGTGGATGTATGTACGTGGT
AACTGTTACGTGACTCATTGTCAGTATTTACAGACGTGATACAATCGCTG
CACGTCGGACAGGAACATTTTGATGCAACGCAAGGAGGCCTTGTGCCAGG
ACTGCTTAAACAGCACCATCGCAGATTTCACCCAGCAGCCCCGGACGGTC
AAGAGTTCGCGTCACCGTCATGGTCATCTTCGTTGCCATCCTCACCGTCA
TCGATTCCGAACGAGGCGACAGGCAAGACCTCCGATGGCCACGAGAGTGC
TGACGCTAGCGCCAGCTCTCAACCCCATGCTGCGGGTCGGGCCTCTGAGG
AAAGCGAAGAGCCTCGAGAGGACGCTCAAGATGAAGGTGCACCGCAGGAT
GAAATTTCAAAGGCGGCAGACTCCGCAGAATCTGAGGGTGCGGTAGGTGT
CGATAGTACCGATGGGGGTGAGTTGAAGGGTGGCGCAGAGGCAAACACGC
TTGCGGAAGACGGCAGAGGTGTCATAGCGTCTTCTGCTGATGCTGCTGCT
GCTGATTTCGGCACAGGACCAAGGCACGAGGCCACGGCTCCGGCCACCGG
CGATCACGTGAGCAGACCCGCGAGAGGTGAAGACGTTGGCCTTGCTGCTC
CAGGAGACGAGGCGGACGGTGCCCTTGCAAGAGATGGCGATGGAGTCGAA
TCAGAGGCTGCCACCAATAGGGTGCATGTTCCAGCTGAAGGAGCAACTGC
AGTAGAAGATGACGTGCCAAGCACGACTTTGAGCTCGACAACCCAGCAGA
GGGAATCCACGAAATCGCCGTCGAGTGATGAAAGTTTATCAGCTGGCGAA
GCTCCCGGTAATAGTCCTATCAATAGTGTAACGGTTGCCAACAAGGCACA
AAACGAACGTGATTGTGCTTCCTCTCAACCGGATGATCGAGTCGATCAAG
ACCAAGCCGGCGTCTCCAGCAGTGGTGTAGATCCGACCATGTCCGGAGGG
GATGCAGTACATCGAGATGGAGAAGGAGTTGGACGCGATGATCATGACAA
CCAGGGACCCCAAGACGCGGACCCCGTTCCCAAGACGTCATCAGAAAGAT
CGTTTTGGAATTGGATTACTCGCTCCCGGCCAAGCAACGGAAAGGATGGT
CAGTCGTGA TGCGCTACGGAAATATTTTGGTCGTTAAGCTTGGCGTGCTT
GGCGGGCGTTGCCGGTTGGTGTTAGGTCCCGCTCGAGGTGGTCGCATCAA
GGCTGGTCCTCTGTCGCTATAATAATATGCCTATTATTTGGCACTCCCAT
AAGTAAGTGGTGTTCGATGCTTGGTTGTTTGGCGGTTGGAGGGCTTGTTG
GTTGTCCGGACGGCGTCGGAAGCGTGTACTCACTTGGTCAAAATTTTGTC
CGAAGGTGGGCTTGCTCATCGCGATTTATATTATGAGCCGATCCTCGAGT
TCAGAGCTACAGGACCTGAGAAACGCACCTAAACGCAATCATGACACCTG
CTGCAGTCAGGAAGTGGCTGTAGGACCTTCAGCACTCAAAATCATTATCC
ATACGAGGTAAACAAGCTGCCAGACTCGACAGGGTCTGCTTTGCTAAGAT
TAACCTCGCCTGTCCATCAATTCCAGGCTAGCGCTGAACCGGACCCACCA
ATCGATGGTACAAACCGACGTGATGCGCCATGGGTGAACGTGGTTGTGTT
TTGTGGTAGACCTTGTGCGATATGCTCCTGACAACGAGAGCTTGTCTGTT
GCTTGGGGGTGCTACGTAGATGGAACGTCGCGCCCGCTTCCCAATCGGGA
TTTAGAGCTATGTTTATCTCTCTCCTGAGTGTATTGTAGAGGCTAGACGT
CCGTTGCCTTCTTTCTTTATAAGTCTTGTATTGAGAGCTACATTACTACC
GTAGTGCGAATAGTAAGTAGCAGCTAGTTTTTTCCCGGCAAGCCTATCTA
TGGAGAATAGTTGATCGACGCTATAGCAAGAATGAAGGGTACTTGGTCGA
TTTTGACCCGGAAAGAGACGGCTGATGCAAGGCTGCGCCTTTATAAACAA
ATCACACTCGACGGGCGTGACGTAGACGGTTGTATTGAAGCGCTAGGACC
TCAAAGAGTTATCTACGCGTGTATGTTGATTCAAGTCGTGGATATTTTCT
TCCTCGGCGATGTTTGAAGAAGTCCGACAGAACTCCGACGAGCTGGGTGG
AGGAGGTTTATACTCACTCGTACCTGTATATGCTCCGAAGCACAGTGCTT
CGTACTTCAAGTACGAAGTTCGTCGTCGTAGCAGGCACTGTATTTCGAAT
ATACTAAGGCACTACAGTGTGGTAGGTGTATGTTTGGTTGGTCAAATAAA
CTTCAGTTGGTGCGTACTATAATAAACCTATTATGTGTATCACTCACGTC
TCAGTTTTGCTCTCGGAGGTCGATCTAAAGTCCGTTGTATTGATGCTTCA
TCGCAGCTATTGATAGTCTCTTTGTTGTCATCTGCCTTACGTTTGACTTA
AGTACTGTATGGACTCTGATTTCGATACATAAAAAAGTTGGAGCGCCCAA
GTGTATAGAGCTATTTATAACGACTAGCTCGAAGACGTTTGGCAGCTTAT
AAGTGCATTGACAAGTGGATGTTTTATGGCCGAGGGGGAATTTTGATCGT
CTCTCCCAGAGCTAATTGATGCACGAGTAGCTCGACATGATGCGAAGTTA
GGGGGACCATTTGGGAAAGGGCACACGCACACACGTGCGTTGAAGGTCAA
GTACATGCTCTGCTGTACGTTCGTGTATTCTGTTGTGCCAACCATCCATG
GACCAGATAAGACATCGACATAATCTCCGCTCGCTTTTCGCTATGAGTAC
CATATACAGACG back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig101:391662..404473+
>mRNA_A-nodosum_M_contig101.24.1 ID=mRNA_A-nodosum_M_contig101.24.1|Name=mRNA_A-nodosum_M_contig101.24.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2478bp|location=Sequence derived from alignment at A-nodosum_M_contig101:391662..404473+ (Ascophyllum nodosum dioecious) back to top