prot_A-nodosum_M_contig101.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig101.11.1
Unique Nameprot_A-nodosum_M_contig101.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length279
Homology
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BLAST of mRNA_A-nodosum_M_contig101.11.1 vs. uniprot
Match: D7G085_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G085_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 3.350e-77
Identity = 134/289 (46.37%), Postives = 178/289 (61.59%), Query Frame = 0 
Query:    1 MSRTEEELPLS--------GNHKKAEHRDQRLALGLAAFALLACAVSSFPPVARQWHPIYYPSLEMEQRGWAWLSTNSIWMAIPLIWTLFYIENTPCVQLLCLLGVVSWAYAGLVFISQAIRGQLPWTSVFDAVAIAVLFLLSLKASW-GFGP-SEIPGSNYRRTWKHMLRKCVLIAACLQLFGSFVACWLPGLPAAPK-SGRESAPWEWNSVVILAMTLTVLWAAFVSSGEFVDVTKQAACAWCALFFAGNFFLAAFSWPALGLVGCSLTISIILALDVSFMIVAAVV 278
            M+  EE LPL         GNH    H  ++LALG     LL  A+  FP V   WHP YY  L  EQRGW WL  N++W+A+ L+WTL +++N PCV   CLL  V W Y  LV +SQA RGQLP  ++ DA+    + ++  +A+W G    S+   S+   TW+ +LRK  L++A   LF +F+ C    LP  P  S RESAPWEWNS ++ AMTL VLWAAF++ G  VD TK+AACAW AL F+G+F L +FSW ALGL   S+T S++LA++ + +  AAVV
Sbjct:    2 MAAPEETLPLRVSVNGDGPGNHDG--HHGKKLALGATVAYLLVFALICFPAVVPLWHPTYYAELGAEQRGWTWLGANALWLALALLWTLLHLDNGPCVATACLLCSVLWFYLSLVLLSQACRGQLPLMAIADALVHLTMLIVCFRAAWVGVAKKSQKARSDGSSTWRRVLRKWALVSASATLFAAFLGCCSSSLPLIPPVSERESAPWEWNSAILFAMTLAVLWAAFLTRGGLVDETKRAACAWIALSFSGSFVLCSFSWQALGLDARSVTTSVVLAVETAVLAAAAVV 288
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig101.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G085_ECTSI3.350e-7746.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig101contigA-nodosum_M_contig101:294891..295727 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig101.11.1mRNA_A-nodosum_M_contig101.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig101 294010..295730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig101.11.1 ID=prot_A-nodosum_M_contig101.11.1|Name=mRNA_A-nodosum_M_contig101.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=279bp
MSRTEEELPLSGNHKKAEHRDQRLALGLAAFALLACAVSSFPPVARQWHP
IYYPSLEMEQRGWAWLSTNSIWMAIPLIWTLFYIENTPCVQLLCLLGVVS
WAYAGLVFISQAIRGQLPWTSVFDAVAIAVLFLLSLKASWGFGPSEIPGS
NYRRTWKHMLRKCVLIAACLQLFGSFVACWLPGLPAAPKSGRESAPWEWN
SVVILAMTLTVLWAAFVSSGEFVDVTKQAACAWCALFFAGNFFLAAFSWP
ALGLVGCSLTISIILALDVSFMIVAAVV*
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