prot_A-nodosum_M_contig10060.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10060.2.1
Unique Nameprot_A-nodosum_M_contig10060.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length145
Homology
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A1Y1K2V0_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K2V0_PHOPY)

HSP 1 Score: 80.1 bits (196), Expect = 1.040e-14
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 0
Query:    2 EVHRMLSHPSEDITRKTAETMGIETTGQWGACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEFEEISART 139
            E H ML H +     K     GIE T Q   CE C + K  R     +  +RA+  G+   VD+ GPM+ +S GG+ Y + F  D ++F+++KF+K+KS+TT  +  ++          +K +R D GGEF      T
Sbjct:  437 EWHEMLGHQNRVQVEKVLNRNGIEYTKQDFFCEACVKGKQHRKVFQVR-QQRAQREGEVMNVDLCGPMEITSYGGSRYFICFTCDYSKFRLIKFLKEKSETTKGIAEVLNFVKNQCGRPLKMLRCDGGGEFNNKDVTT 573          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A8J6DA37_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DA37_9ROSI)

HSP 1 Score: 78.6 bits (192), Expect = 3.550e-14
Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = 0
Query:   31 GACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            G CE C   K  R   P  T  RA  + +    DV GPM+  SL GN Y ++F+DDCTR+  V F+K KS+     +   A   T     IK +R+DNG E+
Sbjct:   21 GVCEVCQMGKQARLPFPTNTSWRASTKLELVHTDVCGPMRTESLSGNRYFILFIDDCTRYCWVYFLKHKSEVVQVFMKFKAAVETETGCKIKTIRSDNGTEY 122          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A8J5YG39_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YG39_9ROSI)

HSP 1 Score: 76.3 bits (186), Expect = 2.360e-13
Identity = 45/134 (33.58%), Postives = 66/134 (49.25%), Query Frame = 0
Query:    4 HRMLSHPSED-----ITRKTAETMGIETTGQWGACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            H+ LSH + +     +++K  E    +T    G  E C   K  R   P  T  RA  + +    DV GPM+  SL GN Y ++F+DDCT++  V F+K KS+     +   A   T     IK +R+DNG E+
Sbjct:  383 HQRLSHANFNSMARMVSKKMVENF-TKTVQNEGVYEVCQMGKQARLPFPTNTSWRASTKLELVHTDVCGPMRTESLSGNRYFILFIDDCTKYCWVYFLKHKSEVVQVFMKFKAVVETEIGCKIKTIRSDNGTEY 515          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A8J5YZW8_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YZW8_9ROSI)

HSP 1 Score: 75.9 bits (185), Expect = 3.120e-13
Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 0
Query:    4 HRMLSHPS-----EDITRKTAETMGIETTGQWGACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            H+ L H +     + ++++  E    +T      CE C   K  R   P  T  RA  + +    DV GPM+  SL GN Y ++F+DDCTR+  + F+K KS+     +   A   T     IK +R+DNG E+
Sbjct:  122 HQRLGHTNFKSMAQMVSKEMVENF-TKTVQSEDVCEVCQMGKQARLPFPTNTTWRASSKLELVHTDVCGPMRTESLSGNRYFILFIDDCTRYCWIYFLKHKSEVAQVFIKFKAAVETETGCKIKTIRSDNGTEY 254          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A8J6D0F7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D0F7_9ROSI)

HSP 1 Score: 75.5 bits (184), Expect = 4.330e-13
Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:   33 CETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            CE C   K  +   P     RA+ R Q  + D+ GPMK +SL G+ Y  +F+DDCTRF  V F+K+KSD         A         +KC+R+DNG E+
Sbjct:  454 CEVCQLDKQTKLPFPVNKAWRAQQRLQLVYTDICGPMKTTSLNGSRYFALFIDDCTRFCWVSFLKQKSDVVGFFCKFKALAKNQASCKLKCIRSDNGTEY 553          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A8J6D2N4_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D2N4_9ROSI)

HSP 1 Score: 75.1 bits (183), Expect = 5.800e-13
Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 0
Query:    4 HRMLSHPS-----EDITRKTAETMGIETTGQWGACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            H+ L H +     + ++++  E    +T      CE C   K  R   P  T  RA  + +    DV GPM+  SL GN Y ++F+DDCTR+  + F+K KS+     +   A   T     IK +R+DNG E+
Sbjct:  461 HQRLGHANFKSMAQMVSKEMVENF-TKTVQSEDVCEVCQMGKQARLPFPTNTTWRATSKLELVHSDVCGPMRTESLSGNRYFILFIDDCTRYCWIYFLKHKSEVAQVFIKFKAAVETETGCKIKTIRSDNGTEY 593          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A8J5Y9W8_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y9W8_9ROSI)

HSP 1 Score: 74.7 bits (182), Expect = 7.500e-13
Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 0
Query:    4 HRMLSHPS-----EDITRKTAETMGIETTGQWGACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            H+ L H +     + ++++  E    +T      CE C   K  R   P  T  RA  + +    DV GPM+  SL GN Y ++F+DDCTR+  + F+K KS+     +   A   T     IK +R+DNG E+
Sbjct:  441 HQRLGHANFKSMAQMVSKEMVENF-TKTVQSEDVCEVCQMGKQARLPFPTDTTWRASSKLELVHSDVCGPMRTESLSGNRYFILFIDDCTRYCWIYFLKHKSEVAQVFIKFKAAVETETGCKIKTIRSDNGTEY 573          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A8J6CYE1_9ROSI (Cysteine dioxygenase n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CYE1_9ROSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.120e-12
Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 0
Query:    4 HRMLSHPS-----EDITRKTAETMGIETTGQWGACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            H+ L H +     + ++++  E    +T      CE C   K  R   P  T  RA  + +    DV GPM+  SL GN Y ++F+DDCTR+  + F+K KS+     +   A   T     IK +R+DNG E+
Sbjct:  451 HQRLGHANFKSMAQMVSKEMVENF-TKTVQSEDVCEVCQMGKQARLPFPTNTTWRATSKLELVHSDVCGPMRTESLSGNRYFILFIDDCTRYCWIYFLKHKSEVGQVFIKFKAAVETETGCKIKTIRSDNGTEY 583          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A0J7KDP1_LASNI (Retrovirus-related gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KDP1_LASNI)

HSP 1 Score: 73.9 bits (180), Expect = 1.520e-12
Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:   33 CETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEF 132
            CE C +AK  R   P K+D    V       D+ GPM+  S+GG  Y++ F+DDC+R+  + F+K KSD   AL   +          IKC+++DNG EF
Sbjct:  454 CEACLEAKITRSPFPIKSDRTTAVL-DLVHTDLCGPMRIPSIGGAKYILHFIDDCSRWGQIYFLKSKSDVFQALKEYVVMIENQTGKKIKCIQSDNGKEF 552          
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Match: A0A2U1QG52_ARTAN (Ribonuclease H-like domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QG52_ARTAN)

HSP 1 Score: 73.6 bits (179), Expect = 2.140e-12
Identity = 42/141 (29.79%), Postives = 69/141 (48.94%), Query Frame = 0
Query:    4 HRMLSHPSEDITRKTAETMGIETTGQWG-----ACETCFQAKAKRHAVPKKTDERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSDTTAALLSLIADYITPQKLSIKCVRTDNGGEFEEISART 139
            HR LSH + D   K A+   +    ++       C +C Q K+KR     KT   +  R     +D+ GPM+  S+ G  Y+++ VDD +R+  VKF++ K +    +++ +       +  ++ VRTDNG EF     RT
Sbjct: 1421 HRRLSHLNFDTINKLAKDNIVTGLPKFKYTKDHLCPSCEQGKSKRATYKPKTVPSSEARLHLLHMDLCGPMRVESINGKKYILVIVDDYSRYTWVKFLRSKDEAPGCIITFLKRIQVLLQALVRIVRTDNGTEFTNQELRT 1561          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10060.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1K2V0_PHOPY1.040e-1433.33Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
A0A8J6DA37_9ROSI3.550e-1439.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YG39_9ROSI2.360e-1333.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YZW8_9ROSI3.120e-1332.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6D0F7_9ROSI4.330e-1339.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6D2N4_9ROSI5.800e-1332.09Integrase catalytic domain-containing protein n=2 ... [more]
A0A8J5Y9W8_9ROSI7.500e-1332.09Integrase catalytic domain-containing protein n=2 ... [more]
A0A8J6CYE1_9ROSI1.120e-1232.09Cysteine dioxygenase n=2 Tax=Gossypium anomalum Ta... [more]
A0A0J7KDP1_LASNI1.520e-1238.00Retrovirus-related gag-pol polyprotein n=1 Tax=Las... [more]
A0A2U1QG52_ARTAN2.140e-1229.79Ribonuclease H-like domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 47..140
e-value: 5.6E-12
score: 47.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 43..145
score: 10.510459
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 54..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10060contigA-nodosum_M_contig10060:9014..9448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10060.2.1mRNA_A-nodosum_M_contig10060.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10060 9011..9448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10060.2.1 ID=prot_A-nodosum_M_contig10060.2.1|Name=mRNA_A-nodosum_M_contig10060.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=145bp
MEVHRMLSHPSEDITRKTAETMGIETTGQWGACETCFQAKAKRHAVPKKT
DERARVRGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKS
DTTAALLSLIADYITPQKLSIKCVRTDNGGEFEEISARTEPAQYL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf