prot_A-nodosum_M_contig1005.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1005.10.1
Unique Nameprot_A-nodosum_M_contig1005.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length160
Homology
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: D8LMY2_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY2_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.200e-59
Identity = 101/161 (62.73%), Postives = 117/161 (72.67%), Query Frame = 0
Query:    3 IHLTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVDEAEKECAKEGWEVQAGT---VKPKPRA-KTETILSTTPDYLNKMARHITFLERQNQG 159
            +HL LLL LDDVNN RHLWRRLPA+AKA GGE + LW VGK LWKRD+  AQAALR REWS P+A YV+L+  R+ ERQL II + F  LPLE VA ++  SV++AEK C KEGWEV A     VKP  R    +TI + TPDYL KMA HI FLERQ+QG
Sbjct:   53 VHLALLLALDDVNNARHLWRRLPAAAKAAGGETAALWEVGKSLWKRDMSFAQAALRDREWSAPLAPYVALIETRVRERQLAIIPKAFTVLPLESVAGMLACSVEDAEKACLKEGWEVDATAEKAVKPSVRLIPDDTIPAATPDYLQKMANHIAFLERQSQG 213          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A6P8Y321_THRPL (COP9 signalosome complex subunit 8 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Y321_THRPL)

HSP 1 Score: 99.4 bits (246), Expect = 3.340e-23
Identity = 54/155 (34.84%), Postives = 93/155 (60.00%), Query Frame = 0
Query:    5 LTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVDEAEKECAKEGWEVQAGT-----VKPKPRAKTETILSTTPDYLNKMARHITFLE 154
            L + L   D+ N + LW+R+PASAK+   ELS +W VG+C+WKRD   A AAL+   WS  +   ++ L++ L  R +D+I+  ++S+ L  +A + G +  EAE+   + GW + A T     V+P P ++   +++++   LNK+  +++FLE
Sbjct:   34 LAIYLCQSDLCNAKFLWKRIPASAKSSNEELSLIWKVGQCMWKRDYPAAYAALQA-PWSDNVRHIMTTLQEELRSRAIDLIANAYSSIALSDLAAMAGINDREAERISNERGWIIDAETEMVHPVRPPPSSQ---VITSSEGQLNKLTDYVSFLE 184          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A7S2FNN9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNN9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.570e-21
Identity = 52/153 (33.99%), Postives = 79/153 (51.63%), Query Frame = 0
Query:    4 HLTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVDEAEKECAKEGWEVQAGTVKPKPRAKTETILSTTP-DYLNKMARHITFLER 155
            H+ + ++L+D++N RHLWRR+    KAGG EL   W VGK LWKR+I  A AAL+ R WS  +A   + L + + E +  ++ + + ++ +   A  +G     A   C    W   AG V   P A      S      +  +A H+TFLE+
Sbjct:   44 HIMVYMILNDLDNARHLWRRIDEGIKAGGSELEATWEVGKLLWKREISAAYAALQ-RTWSAELAPLATALLEAVREHEFALLGKAYTNVGVSTAAAALGMDEAGALAFCTARNWTADAGGVMLTPVAPAPAEPSFEGLQQMQYLAEHVTFLEK 195          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A7S2XW30_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW30_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.650e-19
Identity = 54/160 (33.75%), Postives = 84/160 (52.50%), Query Frame = 0
Query:   11 LDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWS-PPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVDEAEKECAKEGWEVQ--AGTVKPKPRAKTETILSTTP----------DYLNKMARHITFLERQN 157
            L+++   + LWRR P+S K+   +L  LW VG  L +R I  A  AL GR+W  P +A  V  L+  + ERQ+ + SR + SLPL  +A  +G+    A + C  +GWE    AGTVKP+P A T T                D++ ++  +I  +++ +
Sbjct:   65 LNNLAEAKLLWRRSPSSFKSQEADLPALWAVGALLIQRHISQAYIALDGRQWRRPAVAALVPHLKAAIKERQMQLFSRAYRSLPLAAMAEALGTDQSAALRACRAKGWECDESAGTVKPRPPAATTTTAKEDRPHPVDAAAGLDHIKRLTEYINLMDKNS 224          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A7S2SPW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.170e-19
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    5 LTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKR-DIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVD-EAEKECAKEGWEV-QAGTVKPKPRAKTETILSTTPDYLNKMARHITFLERQN 157
            L L L+L+D++N RHLWRR+  S K  G EL  +  V   LW+R DI GA   LRG EWS  +    + LRD L +RQL +  + + S+ L      +G + D +    C  +GW V +AG ++   R      L    + L  ++ H+T LERQ+
Sbjct:   77 LFLYLILNDMHNARHLWRRIDDSCKTDGSELVKVHAVASLLWQRSDIPGAFNLLRG-EWSETLKPLATALRDGLQKRQLSLFEKAYTSVTLSTATAALGFTSDADTAAACTAQGWHVDEAGVIRVTKRPAAVKELQGF-EQLEMLSHHVTLLERQS 230          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A6J1T3B4_FRAOC (COP9 signalosome complex subunit 8 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1T3B4_FRAOC)

HSP 1 Score: 87.4 bits (215), Expect = 1.390e-18
Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 0
Query:    5 LTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVDEAEKECAKEGWEVQAGT-----VKPKPRAKTETILSTTPDYLNKMARHITFLE 154
            L + L   D+ N + LW+R+P S K    ELS +W VG+C+WKRD   A +AL+   WS  +   +  L+D L  R +D+I+  ++S+ +  ++ + G +  EAE+     GW + A T     V+P P +   T   ++   LNK+  +++FLE
Sbjct:   34 LAIYLCQSDLCNAKFLWKRIPTSLKNSHDELSLIWKVGQCMWKRDYPAAYSALQV-SWSDNVRHIMLALQDELRTRAVDLIANAYSSITVSDLSAMAGINDREAERLSNARGWIIDAETEMVHPVRPPPSSHVTT---SSEGQLNKLTDYVSFLE 184          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A3R7J8J7_9STRA (COP9 signalosome complex subunit 8 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8J7_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.790e-18
Identity = 51/157 (32.48%), Postives = 87/157 (55.41%), Query Frame = 0
Query:    4 HLTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMG-SSVDEAEKECAKEGWEVQAGT--VKPKPRAKTETILSTTPDY--LNKMARHITFLER 155
            +L ++L+  ++N+ R LW+R+   AK    EL  +WG+GK LW R++ GA AA+  REWSP +   +  LR    E   +++SR ++++ +  VA  +G +  ++A + C    WEV A    + PKP A      ST  D   L+ +++ +  LE+
Sbjct:   66 YLLIVLLSQNLNDARFLWKRISPEAKHNSEELQAVWGIGKALWDRNLAGAYAAM-DREWSPSLQELIEALRTSTRESTAELLSRAYSTISVNDVALALGFNRPEDACQYCVSLNWEVSAADQLILPKPLANVRRGPSTVVDLNQLDTLSKSVLHLEQ 221          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: UPI001C202F05 (COP9 signalosome complex subunit 8 n=1 Tax=Aricia agestis TaxID=91739 RepID=UPI001C202F05)

HSP 1 Score: 82.8 bits (203), Expect = 8.320e-17
Identity = 40/152 (26.32%), Postives = 81/152 (53.29%), Query Frame = 0
Query:    5 LTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVDEAEKECAKEGWEVQAG--TVKPKPRAKTETILSTTPDYLNKMARHITFLE 154
            L + L  +D+ + + LW+R+P +      E++ +W +G+ LWK+D  G   AL+G  W+ P+A  +  L +++     ++I R ++S+ L+ V  + G + D   +      W +     T++P P++    + +++ D L K+   +TFLE
Sbjct:   33 LAIYLYQNDLCDAKFLWKRIPQNVSTSNPEIAAIWAIGQKLWKKDFPGTYQALKGYNWTEPVAPIIEALEEKVRASVFNLIGRSYSSISLDTVVLMTGLNKDAVLQITRDLKWTLNEDGVTLQPTPKSLPAPLQTSSEDQLFKLTDFVTFLE 184          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A2D4BXT1_PYTIN (COP9 signalosome complex subunit, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXT1_PYTIN)

HSP 1 Score: 77.0 bits (188), Expect = 3.370e-14
Identity = 44/156 (28.21%), Postives = 82/156 (52.56%), Query Frame = 0
Query:    4 HLTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMGSSVDEA-EKECAKEGWEVQAGT--VKPKPRAKTETILSTTPDYLNKMARHITFLERQ 156
            +L ++L+  ++N+ R LW+R+P+  K     L  +W +GK LWKRD   + AA+  R+W   +   ++LLR+   E   +++   ++++PL+  A  +G   + A    C    W+V   T  + PKP  ++   LS+    L  ++ ++  LE Q
Sbjct:   77 YLVIVLLAQNLNDARFLWKRIPSETKQLSDLLPSVWSIGKALWKRDFAASYAAMN-RDWPEGVRELIALLRESTRESAAELLGVAYSTIPLKEAAVALGFDDESALVAYCKSLEWDVSLETKLLHPKPLPRSAPELSSL-QQLESISNYVLHLEEQ 230          
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Match: A0A5D6YG19_9STRA (COP9 signalosome complex subunit 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YG19_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.770e-14
Identity = 44/153 (28.76%), Postives = 80/153 (52.29%), Query Frame = 0
Query:    5 LTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDIQGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATLMG-SSVDEAEKECAKEGWEVQAGTVKPKPRAKTETILSTTP-DYLNKMARHITFLER 155
            L +LL+ +D+N  R LW+R+PA+ K+    L   WG+GK LW+RD   A  A+  + W   +   V LLR    E   +++S  ++++     A  +G +  ++  + CA   WEV       +P+A++     TT  + L  +++++  LE+
Sbjct:   69 LLVLLLAEDLNGARFLWKRIPATLKSESETLCKTWGIGKALWQRDFAAAYNAM-DQPWPQELQALVELLRASTRESTAELLSAAYSTISTHDAAQALGFAQPNDLLEYCASLQWEVDTAEQFVRPKARSPARRDTTGLEQLETLSKYVLHLEQ 220          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1005.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LMY2_ECTSI2.200e-5962.73CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
A0A6P8Y321_THRPL3.340e-2334.84COP9 signalosome complex subunit 8 n=1 Tax=Thrips ... [more]
A0A7S2FNN9_9STRA8.570e-2133.99Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XW30_9STRA1.650e-1933.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SPW3_9STRA7.170e-1936.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6J1T3B4_FRAOC1.390e-1832.90COP9 signalosome complex subunit 8 n=1 Tax=Frankli... [more]
A0A3R7J8J7_9STRA4.790e-1832.48COP9 signalosome complex subunit 8 n=3 Tax=Phytoph... [more]
UPI001C202F058.320e-1726.32COP9 signalosome complex subunit 8 n=1 Tax=Aricia ... [more]
A0A2D4BXT1_PYTIN3.370e-1428.21COP9 signalosome complex subunit, putative n=1 Tax... [more]
A0A5D6YG19_9STRA5.770e-1428.76COP9 signalosome complex subunit 8 n=1 Tax=Pythium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 3..125
e-value: 4.6E-15
score: 55.9
NoneNo IPR availablePANTHERPTHR13339:SF1BNAA08G07630D PROTEINcoord: 3..123
IPR033205COP9 signalosome, subunit CSN8PANTHERPTHR13339COP9 SIGNALOSOME COMPLEX SUBUNIT 8coord: 3..123
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..142
score: 13.080599

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1005contigA-nodosum_M_contig1005:87971..89862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1005.10.1mRNA_A-nodosum_M_contig1005.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1005 87173..90503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1005.10.1 ID=prot_A-nodosum_M_contig1005.10.1|Name=mRNA_A-nodosum_M_contig1005.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=160bp
MKIHLTLLLVLDDVNNGRHLWRRLPASAKAGGGELSDLWGVGKCLWKRDI
QGAQAALRGREWSPPIAGYVSLLRDRLWERQLDIISRGFNSLPLERVATL
MGSSVDEAEKECAKEGWEVQAGTVKPKPRAKTETILSTTPDYLNKMARHI
TFLERQNQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033464CSN8_PSD8_EIF3K
IPR033205COP9_CSN8
IPR000717PCI_dom