prot_A-nodosum_M_contig10.74.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10.74.1
Unique Nameprot_A-nodosum_M_contig10.74.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length320
Homology
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: D7FZK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZK3_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 9.510e-113
Identity = 179/280 (63.93%), Postives = 215/280 (76.79%), Query Frame = 0
Query:   50 GQRTKYLRVGDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAGLRGIRHLDANKLCDVNDRLGPDELLIRINEDMVMAWLTAKVKRATARFAELIEGG---------KGAQEGEGFASGFSAIAAA-DTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASFGTKRAPLFGGNTSAPKKRKGNWEESKEADRNLELSHGSGGDVKTKSDDLGAS-KAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            G+ TK++ VGD+LLELQ ARPREPQEL SFFIDQ+VQ+DG+V  A+R+DPLFLLLPVL+KHA++WCPL QA+AE GC  LRG+RHLDA+KLCDVNDR+GPD+LLIRINE+ V+AWLTAKV+RAT RF EL  GG              G GFA  F AIAA  D     E +AEC+Q+AL  VCEY+G EWA KLA  FGT+R  LFGG ++A KKRK  WEE+ E DRNLELSHGSGG  K K++   A+ KAK+ +S AQ++L+KVNKKGMKSI SFF
Sbjct:    7 GEATKFMMVGDNLLELQVARPREPQELASFFIDQAVQQDGAVHAASRVDPLFLLLPVLAKHATRWCPLAQAMAEGGCGSLRGLRHLDADKLCDVNDRMGPDDLLIRINEESVLAWLTAKVERATRRFTELATGGGEESGWAXXXXXXXGAGFARDFQAIAAPMDARMQKEVEAECKQRALEAVCEYLGDEWATKLAERFGTERGVLFGGRSTATKKRKTVWEETAETDRNLELSHGSGGGQKAKTEAAAAATKAKQPLSHAQRSLAKVNKKGMKSISSFF 286          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: A0A835YS23_9STRA (Ribonuclease H2, subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS23_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.430e-52
Identity = 126/300 (42.00%), Postives = 160/300 (53.33%), Query Frame = 0
Query:   44 FAHPRTGQRTKYL------RVGD-DLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAGLRGIRHLDANKLCDVNDRLGPDELLIRINEDMVMAWLTAKVKRATARFAELIEGGKGAQEG-----EGFASGFSAIAA----------ADTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASFGTKRAPLFGGNTSAPKKRKGN---WEESKEADRNLELSHGSGGDVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
             AHPRTG++ K+L        G  D+LELQ  R   P    SFF+ Q+VQ DG+V MA R+DP  LLLP+++    +W PL Q L EA  A L   RHL A+K+CDVNDRLGPD +L R+NE   +AWL +KV R  A       GG  A +      EG A+GFS  AA          A  +R    +A   + AL  VC+Y+ AEWAE++AA      A L         KRK     WE  +E DRNL LS G+G        + G  KAK     A+  L+KVN KGMKS+ + F
Sbjct:    1 MAHPRTGEKVKWLLRPTHDEPGSLDVLELQVTRVA-PTSFCSFFVGQAVQSDGAVYMATRVDPALLLLPLMTACKDRWIPLGQQLQEARLAWLLRCRHLGADKICDVNDRLGPDLMLYRLNEAKALAWLLSKVDRVAAHLDGGAHGGAAADDANAGAVEGMAAGFSGNAAPNDAVIDPAAAAAERARARRARLLRTALEIVCDYVPAEWAERVAARHDATAAALLEARGGGGIKRKAPATAWEACREEDRNLSLSLGNGN-----KGEAGGKKAK--APPAKSKLAKVNTKGMKSLATLF 292          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: A0A7S2XY24_9STRA (Ribonuclease H2 subunit B n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY24_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.270e-35
Identity = 115/354 (32.49%), Postives = 163/354 (46.05%), Query Frame = 0
Query:    1 MADQHVLLVQDEAFSLSSLRDRPVQRQNGSSNDNRRLLGKFTGFAHPRTGQRTKYLRVGDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHA-SKWCPLDQALAEAG----CAGLRGIRHLDANKLCDVNDRLGPDELLIRINEDMVMAWLTAKVKRATARFAELIEGGK----GAQEGEGFASGFSA------IAAADTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASFGTKRAPLFGGNTSAPK----------------KRKGNWEESKEADRNLELSHGSGG-----DVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            M  ++V LV+D    +       V   N  SN +           HPR+G+  KY+  G D+LELQ        +  SFFID SV+ D  + +  R+DPL LLLP L+  A +++ PLDQA++ +        L   RHLD +K+CDVND+LGP+ +L R+NE  V+ WL  KV+RA    A +         GA +   FA+GF A        AAD+     G  +  +QA+  V EY    W   L  S G   A L   +  A K                +R   W+++   D+ LE + G G      D   K   L A+    + +   K L+K    GMK+I SFF
Sbjct:    5 MNRRYVFLVEDNG-GVFQANSENVGGSNSESNISDEEKCSIISLKHPRSGELLKYMAAGQDILELQKV---SVSKYSSFFIDNSVKSDAVLWVGTRVDPLLLLLPCLAHQAQARFVPLDQAVSSSSGDDDSLQLLKCRHLDLDKICDVNDKLGPETMLYRLNEGKVVGWLKGKVERAQRHLARVEPRADDPCGGAGDSASFAAGFQAPRTDASAGAADSG----GVKKSLRQAVQVVLEYTAERWRAPLLESLGLDEAVLEPPSRKAAKSKQQGKADDEPATAGERRAQQWQDAATLDKALEYTQGLGSSGAETDPAKKKQKLQAT----TRTTGNKKLTKGKVTGMKTISSFF 346          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: A0A7S3YG07_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG07_HETAK)

HSP 1 Score: 123 bits (309), Expect = 5.330e-30
Identity = 88/228 (38.60%), Postives = 118/228 (51.75%), Query Frame = 0
Query:   61 DLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAG------LRGIRHLDANKLCDVNDRLGPDELLIRINEDMVMAWLTAKVKRATARFAELIEGGKG-AQEGEGFASGFSAIA-------AADTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASF-GTKRAPLFGGNTSAPKKRKGNWEE-SKEADRNLEL 272
            D+ E+Q  +     +  SFF+ Q+VQ DG+  +A+RIDPLF++LPV SKH +++ PLDQ L+    AG      +    HL  + +CDVNDRLGPD +  RINE  V+AWL  K+K+         E GK   Q G  F  GF A +        +DT   V       + A   + EYI  EW EK+  S+ G     L   + +AP KRK  WE    E DR L L
Sbjct:    6 DVYEIQLLKA---SKYSSFFVGQAVQSDGNFYVASRIDPLFIVLPVFSKHGTRYSPLDQILSAGSVAGEHNFLQIASCNHLKLSNICDVNDRLGPDSIFYRINEAKVVAWLKMKIKQVYCHLKS--EKGKSHMQVGGSFVRGFEATSKSTGSSSGSDTKDSVITTDPEFKLAAKLIFEYICEEWQEKVLQSYSGLGAKDLEEASGAAPVKRKA-WEAPDAERDRLLAL 227          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: A0A4D9DAM5_9STRA (Ribonuclease H2 subunit B n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAM5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.170e-28
Identity = 106/320 (33.12%), Postives = 148/320 (46.25%), Query Frame = 0
Query:   38 LGKFTGFAHPRTGQRTKYL-RVGDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKH-ASKWCPLDQALA---EAGCAGLRGIRHLDANKLCDVNDRLGPDELLIRINEDMVMAWLTAKVKRATARFAELIEGGKGAQE---GEGFASGF----SAIAAADTDRPVE-----GKAECQQQ-------ALGTVCEYIGAEWAEKLAASFGTKRAPLFGGNTSAPKKRKGNWEESKEADRNLELSHGSG---------------GDVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            LG+   F HPR G  ++YL      L ELQ+ RP    + GS+F++Q V  DG + +A+ +DP  +LLPVL KH A+++ PL Q LA   +     LR  + LD + +CDVND+LG D LL R+N +  M WL  KV RAT     L E  +  Q    G GFA+GF     AI    T          GK + ++        A+  V EY+   WA KL    G     +  G   A  K++  W+   + ++   ++   G                             A+   S AQK L+K N KG+KSI SFF
Sbjct:   39 LGQVLAFTHPRGGYPSQYLLSPAGQLCELQSFRP-SGSKFGSWFVEQRVVSDGLLYVASPVDPKLILLPVLEKHGATRFSPLAQLLAAEADGAYLALRQCQGLDLHLVCDVNDQLGEDMLLYRLNAEKTMDWLAKKVARATQALVAL-EAAREEQNNGMGSGFAAGFVVEAGAIQGGSTGEDKRSTGAGGKVQTREATREEARLAVELVSEYLSEAWAVKLQHRCGFSEEEMRQG---AGAKKRSAWDGDGDLEQGTAMALTQGKRXXXXXXXXXXXXXXXXXXXXXXXXMRSAQGGQSLAQKKLAKTNLKGVKSISSFF 353          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: A0A2B4SSH9_STYPI (Ribonuclease H2 subunit B n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SSH9_STYPI)

HSP 1 Score: 111 bits (277), Expect = 1.030e-24
Identity = 95/285 (33.33%), Postives = 146/285 (51.23%), Query Frame = 0
Query:   41 FTGFAHPRTGQRTKYLRV--GDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAGL-RGIRHLDANKLCDVNDRLGPDELLI-RINEDMVMAWLTAKVKRATARFAELIEGGKGAQEGEGFASGFSAIAAADTDRPVEG-KAECQQQALGTVCEYIGAEWAEKLAASFGTKRAPLFGGNTSAPKKRKGNWEESKEA--DRNLELSHGSGGDVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            F    HPRTG   ++L    G+ + E+     +  +E  S+FI+ SVQ+DGS+ +   +DPLFL+LP L+K++ K+  LDQ L +     + R    L ++++ ++ D  G D+L + R+N D   AWL AKV++ TA    L         G   + G  +     + R ++  +++  + A G V EY+   W+E+L  S G             P KR    +E  EA  D + E S  +    KT+SD     K    ++ AQK+LSKV+KKGMKSI SFF
Sbjct:   39 FIKIPHPRTGNNQQFLLTHSGEKIFEVL----KFTEEPRSWFIEDSVQKDGSLFVITPVDPLFLVLPYLTKYSQKFRTLDQLLLDDEHPPICRLTGCLSSDEILNICDVKGDDDLQVFRLNNDKTTAWLKAKVEQ-TANSLSL--------SGVHVSKGSQSATFVRSRRHIDATRSDFVRYAFGLVSEYLSLRWSERLKESLGITDEAQLSSPEEPPTKRAKVTDEIPEATEDYSKEFSKLNS---KTESD-----KTATKLTAAQKSLSKVDKKGMKSISSFF 302          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: A0A6P8HJ46_ACTTE (Ribonuclease H2 subunit B n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HJ46_ACTTE)

HSP 1 Score: 105 bits (263), Expect = 8.920e-23
Identity = 97/304 (31.91%), Postives = 149/304 (49.01%), Query Frame = 0
Query:   23 PVQRQNGSSNDNRRLLGKFTGFAHPRTGQRTKYL--RVGDDLLELQ--AARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAGLRGIRH-LDANKLCDVNDRLGPDEL-LIRINEDMVMAWLTAKVKRATARF-AELIEGGKGAQEGEGFASGFSAIAAADTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASFGT-KRAPLFGGNTSAPKKRKGNWEESKEADRNLELSHGSGGDVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            P    NGSS D +     F    HPRT +   +L  R  D + E+   A  PR      S+FI+ SVQ+DGS+L+   IDP+FL +P L+++ +K+  +DQ L +     +  +   + ++ L +V D  G D+L   R+NED ++AWL  KV+    +  +  I   KG+Q      S   +    D         +  + + G VC+Y+ + WA+KL A+    +   +       P KR    + + +A   LE        +KTK+     SK    M+ AQK+LSKVNK GMKS+ SFF
Sbjct:   23 PETALNGSS-DGKDDEPTFVKLLHPRTEKECMFLMSRNKDAVYEIMKFAEGPR------SWFIEDSVQKDGSLLVTTSIDPIFLCIPYLTRNKTKFRTIDQVLMDDDYPAVSSLSMCVSSDVLSNVCDCKGNDDLQAYRLNEDKLIAWLKTKVECVADKLESSKINVSKGSQSATFVRSKLQSNVTRD---------DYLRYSCGIVCQYLDSSWADKLQAALNLPEEKTVLSSPEEPPSKR---TKLNNDAGTVLEDYSKEYEKIKTKT----TSKTPGKMTAAQKSLSKVNKNGMKSMASFF 303          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: UPI00077A3EC1 (ribonuclease H2 subunit B-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A3EC1)

HSP 1 Score: 101 bits (251), Expect = 4.960e-21
Identity = 94/284 (33.10%), Postives = 140/284 (49.30%), Query Frame = 0
Query:   41 FTGFAHPRTGQRTKYLRVGDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAGLRGIRH-LDANKLCDVND-RLGPDELLIRINEDMVMAWLTAKVKR-ATARFAELIEGGKGAQEGEGFASGFSAIAAADTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASFG-TKRAPLFGGNTSAPKKRKGNWEESKEA--DRNLELSHGSGGDVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            F   +HPR+ +  ++L         +  R +E  E  S+F++ SVQ DGS+ +   IDPLFL+LP   K + K+  L+Q L +     +  +   L +N+L +++D +   D    R+N D  +AWL  KVK+ A    +  I   KG+Q      S   A A  D         + ++ A G V +Y+  +W+E+L  S   T  APL       P KR    +E  EA  D + E S  S    KT+ D  G+      ++ AQK+LSKV+K GMKSI SFF
Sbjct:   40 FIKISHPRSSKAVQFLLSPCRQKVFEVLRFKE--EPRSWFVEDSVQRDGSLFVVTPIDPLFLVLPYFEKLSQKFRTLEQILEDDRHPSINTLTSCLSSNELLNISDVKRDHDLQAYRLNNDKTIAWLKLKVKKTADCLSSSGINASKGSQNAVFVRSKRHANATRD---------DYERYAFGLVSDYLSPQWSERLRESLSITDDAPLSSPE-EPPTKRAKVSDEIPEATEDYSKEFSKLSS---KTEMDKTGSK-----LTAAQKSLSKVDKSGMKSISSFF 303          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: A7RQZ3_NEMVE (Ribonuclease H2 subunit B n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RQZ3_NEMVE)

HSP 1 Score: 97.1 bits (240), Expect = 1.800e-19
Identity = 94/286 (32.87%), Postives = 135/286 (47.20%), Query Frame = 0
Query:   41 FTGFAHPRTGQRTKYLRVGDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAGL----RGIRHLDANKLCDVNDRLGPDELLI-RINEDMVMAWLTAKVKRATARFAEL-IEGGKGAQEGEGFASGFSAIAAADTDRPVEGKAECQQQALGTVCEYIGAEWAEKL--AASFGTKRAPLFGGNTSAPKKRKGNWEESKEADRNLELSHGSGGDVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            F    HPRTG+  + L   D+    + A+ ++  E  S+FID +V EDGS+++A  ID +FL LP L K +S++  LDQ L ++    +      I H     +CD     G D+L + RINED  MAWL  KV+      A   I   KG+Q     A+   +   +D  R      +  + + G +C+Y+   W EKL  A +   K       +   P KR    EE  E   +    +      K KS  + A K    M+  Q+ LSKV+K GMKSI SFF
Sbjct:   43 FAKIPHPRTGKGVQLLFSSDEKSVCEVAKFKD--EPRSWFIDDTVHEDGSMVIATPIDSVFLCLPYLEKCSSQFRTLDQILIDSKFPSVGKLTNCITHESLTSVCDCK---GDDDLHVYRINEDKTMAWLKTKVECVADYLATSDINVSKGSQS----ATFVRSRKHSDVTRE-----DHLRYSSGMICDYLSLSWEEKLKKALNLPEKDKEKEVSDEEPPSKRV-KLEEGSETVEDYSKEY-----EKLKSK-IPAGKTPGKMTAGQRALSKVDKTGMKSISSFF 307          
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Match: UPI00106D86B5 (ribonuclease H2 subunit B-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D86B5)

HSP 1 Score: 94.7 bits (234), Expect = 1.100e-18
Identity = 85/280 (30.36%), Postives = 130/280 (46.43%), Query Frame = 0
Query:   41 FTGFAHPRTGQRTKYLRVGDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPLFLLLPVLSKHASKWCPLDQALAEAGCAGLRGIRH-LDANKLCDVNDRLGPDELLI-RINEDMVMAWLTAKVKRATARFAELIEGGKGAQEGEGFASGFSAIAAADTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASFGTKRAPLFGGNTSAPKKRKGNWEESKEADRNLELSHGSGGDVKTKSDDLGASKAKKSMSQAQKNLSKVNKKGMKSIKSFF 318
            F    HP+TG   +YL   +     +  +  E     S+FID SV +DG++    +ID LF++LP L   ++K+  L+  L E+    +  + H +    LC V D  G ++L++ ++N D V++WL  KV +   +  +      GAQ      S  S     D              A G V +YI   W++KL AS G     + G +   P  +K   +ES  A  N + S       K K+ D   +     ++ AQK+L+KVN KGMKSI SFF
Sbjct:   40 FVMLPHPKTGHIQQYLLSKNKQEISEILKFNETPR--SWFIDNSVLQDGNLYFGTKIDALFMVLPSLKSTSTKFMTLEHILQESDNNNICELSHCITKEDLCLVTDMKGEEDLIVCKLNHDKVISWLEKKVYQTEDQLKQASICTSGAQSSTFVRSSKSRGNTQDY----------LGYAFGLVSDYISDYWSQKLKASLGINDE-ISGSSEEEPACKKVKLDESLAAKPNEDYSKFF---AKAKATDQNTNVK---LTAAQKSLAKVNTKGMKSISSFF 300          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.74.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZK3_ECTSI9.510e-11363.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YS23_9STRA1.430e-5242.00Ribonuclease H2, subunit B n=1 Tax=Tribonema minus... [more]
A0A7S2XY24_9STRA3.270e-3532.49Ribonuclease H2 subunit B n=1 Tax=Fibrocapsa japon... [more]
A0A7S3YG07_HETAK5.330e-3038.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9DAM5_9STRA7.170e-2833.13Ribonuclease H2 subunit B n=1 Tax=Nannochloropsis ... [more]
A0A2B4SSH9_STYPI1.030e-2433.33Ribonuclease H2 subunit B n=1 Tax=Stylophora pisti... [more]
A0A6P8HJ46_ACTTE8.920e-2331.91Ribonuclease H2 subunit B n=1 Tax=Actinia tenebros... [more]
UPI00077A3EC14.960e-2133.10ribonuclease H2 subunit B-like n=2 Tax=Acropora Ta... [more]
A7RQZ3_NEMVE1.800e-1932.87Ribonuclease H2 subunit B n=1 Tax=Nematostella vec... [more]
UPI00106D86B51.100e-1830.36ribonuclease H2 subunit B-like n=1 Tax=Dendronepht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 289..309
NoneNo IPR availableGENE3D1.10.20.120coord: 97..238
e-value: 3.0E-18
score: 68.2
NoneNo IPR availableGENE3D2.20.25.530coord: 19..95
e-value: 1.4E-8
score: 36.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..309
IPR040456Ribonuclease H2 subunit BPANTHERPTHR13383RIBONUCLEASE H2 SUBUNIT Bcoord: 34..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:785692..788467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.74.1mRNA_A-nodosum_M_contig10.74.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10 785516..788647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10.74.1 ID=prot_A-nodosum_M_contig10.74.1|Name=mRNA_A-nodosum_M_contig10.74.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=320bp
MADQHVLLVQDEAFSLSSLRDRPVQRQNGSSNDNRRLLGKFTGFAHPRTG
QRTKYLRVGDDLLELQAARPREPQELGSFFIDQSVQEDGSVLMANRIDPL
FLLLPVLSKHASKWCPLDQALAEAGCAGLRGIRHLDANKLCDVNDRLGPD
ELLIRINEDMVMAWLTAKVKRATARFAELIEGGKGAQEGEGFASGFSAIA
AADTDRPVEGKAECQQQALGTVCEYIGAEWAEKLAASFGTKRAPLFGGNT
SAPKKRKGNWEESKEADRNLELSHGSGGDVKTKSDDLGASKAKKSMSQAQ
KNLSKVNKKGMKSIKSFFK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040456RNase_H2_suB