prot_A-nodosum_M_contig10.151.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10.151.1
Unique Nameprot_A-nodosum_M_contig10.151.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length129
Homology
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A6H5K8N1_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N1_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.510e-43
Identity = 86/153 (56.21%), Postives = 101/153 (66.01%), Query Frame = 0
Query:    1 MTSLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIA------------------------------GLIKGIDEVEGMLLHNIAQGRLNDRGNYAVNVAPRSQEPA-TKKDGVIEVEHIDGKVGNLPEDVTVSRS 122
            M SLRREVLGGYRRL+R R+VAFK D+TML ASKQQLR+EF+ NK + +P KI                               GLIKGI+EVE ML +NIAQ RLNDRG+YAVNVAPR+ E A  ++ G IEVEHI GK G+LP DVTV+ S
Sbjct:    1 MASLRREVLGGYRRLMRVRVVAFKDDTTMLEASKQQLRIEFNKNKAVTDPSKIGQQHSRARGSLDRLYRMESACQIADRFLHVPGLIKGINEVEDMLKYNIAQARLNDRGHYAVNVAPRTPEAAGAEEGGTIEVEHIGGKAGDLPGDVTVTGS 153          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: D8LJV8_ECTSI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV8_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 5.710e-34
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    1 MTSLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRLNDRGNY 82
            M SLRREVLGGYRRL+R R+VAF+ D+TML ASKQQLR+EF+ NK + +P KIAGLIKGI+EVE ML +NIAQ RLNDRGNY
Sbjct:    1 MASLRREVLGGYRRLMRVRVVAFEDDTTMLEASKQQLRIEFNKNKAVTDPSKIAGLIKGINEVEEMLKYNIAQARLNDRGNY 82          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A7S1U0R5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0R5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.310e-19
Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 MTSLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRLNDRGNYAVNV 86
            M + R + L G+RRLLRAR V F+GD+  LAAS+ +LR +F  N+   +  KIA +++GIDEVE M+L+N  QG LN++GNY   +
Sbjct:    1 MAATRLQALHGFRRLLRARKVLFRGDANALAASQLELRSQFQTNRHETDAAKIAEMLRGIDEVEDMMLNNFVQGELNEQGNYTTTI 86          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A7S2C810_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C810_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 4.090e-18
Identity = 43/107 (40.19%), Postives = 70/107 (65.42%), Query Frame = 0
Query:    1 MTSLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRLNDRGNYAVNVAPRSQEPATKKDGVIEVEHID 107
            M ++R +VL GYR+LLR R VAF+GD+  L  S++ +R+ F+ N+ + + K+I   ++G+ +   ML  N+ QG+LNDRGNY+V++ P  Q      +  IE+ H+D
Sbjct:    1 MAAMRSQVLAGYRQLLRVRNVAFQGDALALEKSQEAIRMGFEANRLVSDEKEIKEHLRGVTQAVEMLQFNVLQGKLNDRGNYSVDIRPE-QADFHGGEEKIEISHMD 106          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A3M6VHL4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHL4_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.360e-17
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    3 SLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRLND-RGNYAVNVAPRSQEP---ATKKD 98
            S+RR+VLGGYRRLLRA   AF+ D+  L  +   LR  F +N ++ + K++  L+KGIDE EGMLLH+I QGR  +  GN AV    +  +P   A +KD
Sbjct:    2 SIRRQVLGGYRRLLRASRQAFRDDAYALQQAHLTLRQNFIDNCQVTDKKQLDELVKGIDEAEGMLLHHIVQGRAKEANGNEAVRFEVKLTDPQRQAMRKD 101          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A6G0WSM7_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSM7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.820e-16
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    3 SLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRLNDRGNYAVNVAPRSQEPATKKDGVIEVEHIDGK 109
            S+R +VLGGYRRL+RA    F  D   +  + + +R  F  N+++ +   + GLIKGIDE E MLL+NI QG+ N++G Y V +    +    K + + E+    GK
Sbjct:    5 SVRAQVLGGYRRLIRASRQTFGADKRAVVEAHKAVRAAFLENRDVKDVSALQGLIKGIDEAESMLLYNIVQGQANEQGTYQVTLTDPQKSHMRKDEELTEITPDTGK 111          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A835YM21_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM21_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 8.670e-16
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    3 SLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRL 76
            ++R  V+ GYR LLR RLV FK D   + ASK +L+ EF  NK + +  K+A L+KGI+EV+ MLLHN+ Q R+
Sbjct:    2 AMRSRVMAGYRSLLRTRLVVFKDDDRAIRASKMKLKEEFMKNKNVTDANKLASLLKGIEEVQQMLLHNVVQVRI 75          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: H3GET2_PHYRM (Complex1_LYR_dom domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GET2_PHYRM)

HSP 1 Score: 77.0 bits (188), Expect = 1.430e-15
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    3 SLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGR 75
            S+R +VLGGYRRLLRA   AF+GD+  L  ++  LR  F  N+++ + +++ GL+KGIDE EGMLLH+I QGR
Sbjct:    2 SVRVQVLGGYRRLLRASRQAFRGDAYALQQARAALRENFVANRDVNDSEQLDGLVKGIDEAEGMLLHHIVQGR 74          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A425CED1_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CED1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.250e-15
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    3 SLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRLND-RGNYAVNVAPRSQEP---ATKKD 98
            S+RR+VLGGYRRLLRA   AF+ D+  L  +   LR  F +N ++ + K++  L+KGIDE EGMLLH+I QGR  +  GN AV    +  +P   A +KD
Sbjct:    2 SIRRQVLGGYRRLLRASRQAFRDDAYALQQAHLTLRQNFIDNCQVTDKKQLDELVKGIDEAEGMLLHHIVQGRAKEANGNEAVRFEVKLTDPQRQAMRKD 101          
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Match: A0A7S2MBN3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBN3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 6.440e-15
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    7 EVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNPKKIAGLIKGIDEVEGMLLHNIAQGRLNDRGNYAVNVAP 88
            +VL GYRRLLRAR  AF+GD+  +  SK  +R  F+ N+    P +IA  ++G+D+ E ML  ++ QGR N  GN+AV++ P
Sbjct:    7 KVLAGYRRLLRARREAFRGDTLAIVKSKDAIRQGFEANRSETCPDQIAEHLRGVDQAEEMLRFHVLQGRRNQEGNFAVSINP 88          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8N1_9PHAE7.510e-4356.21Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
D8LJV8_ECTSI5.710e-3474.39Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S1U0R5_9STRA1.310e-1948.84Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2C810_9STRA4.090e-1840.19Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3M6VHL4_9STRA6.360e-1747.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A6G0WSM7_9STRA4.820e-1638.32Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YM21_9STRA8.670e-1650.00Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
H3GET2_PHYRM1.430e-1553.42Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A425CED1_9STRA4.250e-1547.00Bifunctional lysine-specific demethylase and histi... [more]
A0A7S2MBN3_9STRA6.440e-1545.12Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 6..58
e-value: 1.5E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR46749COMPLEX III ASSEMBLY FACTOR LYRM7coord: 2..85
IPR045298LYRM7, LYR domainCDDcd20267Complex1_LYR_LYRM7coord: 8..79
e-value: 1.30138E-24
score: 87.2339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:1433583..1438708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.151.1mRNA_A-nodosum_M_contig10.151.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10 1433328..1439018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10.151.1 ID=prot_A-nodosum_M_contig10.151.1|Name=mRNA_A-nodosum_M_contig10.151.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=129bp
MTSLRREVLGGYRRLLRARLVAFKGDSTMLAASKQQLRLEFDNNKEIVNP
KKIAGLIKGIDEVEGMLLHNIAQGRLNDRGNYAVNVAPRSQEPATKKDGV
IEVEHIDGKVGNLPEDVTVSRSPSKPSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom
IPR045298Complex1_LYR_LYRM7