mRNA_A-nodosum_M_contig99.28.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: D7G127_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G127_ECTSI) HSP 1 Score: 232 bits (591), Expect = 8.280e-71 Identity = 119/172 (69.19%), Postives = 145/172 (84.30%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPFSEMSAASEEQHTKAQ 516
A+SWY VYRKPEYQRLKRHIE L K++EKKKAEPVG E+K K+ + +SRLEKDL EA+K++QAL MS KL+ AV +M+VM+ +NKS +G+VVAKLPF+P SL+QKISHR ++G+DPTDCSVAF+FALCQAGVKGNI KLVGVG PKG+KEANPF+E+ A EE H K Q
Sbjct: 22 AYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVERK-VKNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPKGMKEANPFAELGAPVEEDHAKVQ 192
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A118JTC9_CYNCS (Calcium load-activated calcium channel n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JTC9_CYNCS) HSP 1 Score: 116 bits (291), Expect = 7.210e-27 Identity = 60/157 (38.22%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 471
A SW ++YR+ Y+ LK I+K +K+LE K + + R+ + + R+E LKE+S+++ + + A+++ V +N G VAKLPFIP ++QK+SHRG++GDDPTDCS+AFL+ LC ++ N+ K +G P+G A PF
Sbjct: 30 AISWLLIYRRTSYKSLKSTIDKASKKLETMKTDSTAL-----RKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALILFAVFGFLNSLYEGKAVAKLPFIPLRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGPF 181
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2J6LTV4_LACSA (Calcium load-activated calcium channel n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LTV4_LACSA) HSP 1 Score: 112 bits (280), Expect = 2.340e-25 Identity = 60/167 (35.93%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPFSEMSAASEEQ 501
A SW ++YR+ Y+ LK I++ +K+LE K P + K ++ +SR+E LK++S+++ + + A+V+ +V +N G V KLPF+P S++QK+SHRG++GDDPTDCS+AFL+ LC ++ N+ K +G P+G F A+ Q
Sbjct: 26 AISWLLIYRRTSYKSLKSTIDQASKKLETMKTTPTTLKKSKAKK-----ISRVETSLKDSSRDLSLSKFKSGAVVALVLAVVFGVMNSLYEGKAVGKLPFVPVSIVQKMSHRGLRGDDPTDCSMAFLYFLCSMSIRTNLQKFLGFSPPRGAAGPGLFQVPDASDTNQ 187
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A1S4CK71_TOBAC (Calcium load-activated calcium channel n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CK71_TOBAC) HSP 1 Score: 112 bits (279), Expect = 3.320e-25 Identity = 61/157 (38.85%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 471
A SW ++YR Y LK +I+K +K+LE K N+ K+ + R E LK++S+++ + + A+V+ MV +N G VVAKLPF+PF +IQK+SHRG+ G+D TDCS+AFL+ LC ++ N+ K +G P+G A F
Sbjct: 30 AISWVLIYRTTSYNSLKSNIDKASKKLETMKTLESKKPNKSKK------IDRFETSLKDSSRDLSLFKFKSGFVVAIVLFMVFAFLNSLFEGKVVAKLPFVPFRIIQKMSHRGLSGNDMTDCSMAFLYLLCSMSIRTNLQKFLGFSPPRGAAGAGLF 180
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A164X6L5_DAUCS (Calcium load-activated calcium channel n=2 Tax=asterids TaxID=71274 RepID=A0A164X6L5_DAUCS) HSP 1 Score: 110 bits (276), Expect = 9.970e-25 Identity = 60/157 (38.22%), Postives = 96/157 (61.15%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 471
A SW ++YR Y+ LK I+K +K+LE K +P K+ K+++ + R+E LKE+S+++ + + A+V+ +V +N G VAKLPF+P L+QK+SHRG++G+D TDCS+AFL+ LC ++ N+ K +G P+G A F
Sbjct: 30 AISWLLIYRTSSYKSLKSTIDKASKKLETMKTDPTAPKISAKKSKTKK-IDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGFLNNLFEGKAVAKLPFVPIKLVQKMSHRGLQGEDFTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGLF 185
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2P5C5L7_TREOI (Calcium load-activated calcium channel n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5C5L7_TREOI) HSP 1 Score: 110 bits (275), Expect = 1.340e-24 Identity = 61/150 (40.67%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 450
A SW ++YR Y+ L+ I+K AK+LE K E KK + + + R+E LKE+S+++ + + A+V+ +V +N G VVAKLPF PF L+ K+SHRG++GDDPTDCS+AFL+ LC ++ N+ K +G P+G
Sbjct: 31 AISWILIYRTNSYKSLRSSIDKAAKKLENMKTETSAKIAAKKSK--TKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 178
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2U1LDT4_ARTAN (Calcium load-activated calcium channel n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LDT4_ARTAN) HSP 1 Score: 110 bits (274), Expect = 1.760e-24 Identity = 57/150 (38.00%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 450
A SW ++YR+ Y+ LK I+K +K+LE + DN ++ + + R+E LKE+++++ + + A+V+ +V +N G VVAKLPF+PF ++QK+SHRG++GDD TDCS+AFL+ LC ++ N+ K +G P+G
Sbjct: 30 AISWLLIYRRTSYKSLKTAIDKASKKLE-----TMKTDNMVSKKNKAKKIDRVETTLKESTRDLSLFKFKSGTVVALVLFIVFGLMNSLYEGRVVAKLPFVPFKIVQKMSHRGLRGDDYTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 174
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: W9SNZ3_9ROSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=W9SNZ3_9ROSA) HSP 1 Score: 109 bits (273), Expect = 2.490e-24 Identity = 60/150 (40.00%), Postives = 93/150 (62.00%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 450
A SW ++YR Y+ L+ I+K AK+LE K E + +K + K + R+E LKE+S+++ + + A+V+ +V +N G VVAKLPF PF L+ K+SHRG++G+DPTDCS+AFL+ LC ++ N+ K +G P+G
Sbjct: 31 AISWLLIYRTNSYKSLRSSIDKAAKKLETMKTESAKIAAKKSKTKK---IDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A6P6SVN8_COFAR (Calcium load-activated calcium channel n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6SVN8_COFAR) HSP 1 Score: 109 bits (273), Expect = 2.550e-24 Identity = 63/157 (40.13%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAEPVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 471
A SW ++YR Y+ LK I+K +K+LE K P G K+ K+++ + R+E LKE+S+++ + + AVV+ MV +N G VAKLPF+P ++QK+SHRG+ GDD TDCS+AFL+ LC ++ N+ K +G P+G A F
Sbjct: 30 AISWLLIYRTSSYKSLKSTIDKASKKLETMKT-PNGTSELTKKSKTKK-IDRVETSLKESSRDLSLFKFKSGAVVAVVLFMVFGLLNTLFEGKPVAKLPFVPLRIVQKMSHRGLSGDDMTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGLF 184
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2R6R539_ACTCC (Calcium load-activated calcium channel n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6R539_ACTCC) HSP 1 Score: 109 bits (272), Expect = 3.430e-24 Identity = 61/158 (38.61%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 1 AFSWYVVYRKPEYQRLKRHIEKLAKELEKKKAE-PVGMDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 471
A SW ++YR Y+ LK I+K +K+LE K + P+ K ++ + R+E LKE+S+++ + + AVV+ +V +N G VAKLPF+P ++QK+SHRG++GDDPTDCS+AFL+ LC ++ N+ K +G P+G A F
Sbjct: 31 AISWVLIYRTTSYKSLKSSIDKASKKLEIMKTDSPINKAKAKAKK-----MDRVETSLKESSRDLSLFKFKSGAVVAVVLFVVFGLLNSLFEGKAVAKLPFVPIRIVQKMSHRGLQGDDPTDCSMAFLYFLCSINIRTNLQKFLGFSPPRGAAGAGLF 183 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig99.28.2 >prot_A-nodosum_M_contig99.28.2 ID=prot_A-nodosum_M_contig99.28.2|Name=mRNA_A-nodosum_M_contig99.28.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=147bp MDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVback to top mRNA from alignment at A-nodosum_M_contig99:259359..262388- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig99.28.2 ID=mRNA_A-nodosum_M_contig99.28.2|Name=mRNA_A-nodosum_M_contig99.28.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3030bp|location=Sequence derived from alignment at A-nodosum_M_contig99:259359..262388- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig99:259359..262388- >mRNA_A-nodosum_M_contig99.28.2 ID=mRNA_A-nodosum_M_contig99.28.2|Name=mRNA_A-nodosum_M_contig99.28.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=441bp|location=Sequence derived from alignment at A-nodosum_M_contig99:259359..262388- (Ascophyllum nodosum dioecious)back to top |