prot_A-nodosum_M_contig99.28.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig99.28.2
Unique Nameprot_A-nodosum_M_contig99.28.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length147
Homology
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: D7G127_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G127_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 8.120e-54
Identity = 87/128 (67.97%), Postives = 109/128 (85.16%), Query Frame = 0
Query:    9 KSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPFSEMSAASEEQHTKAQ 136
            K+ + +SRLEKDL EA+K++QAL MS KL+ AV +M+VM+ +NKS +G+VVAKLPF+P SL+QKISHR ++G+DPTDCSVAF+FALCQAGVKGNI KLVGVG PKG+KEANPF+E+ A  EE H K Q
Sbjct:   65 KNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPKGMKEANPFAELGAPVEEDHAKVQ 192          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A118JTC9_CYNCS (Calcium load-activated calcium channel n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JTC9_CYNCS)

HSP 1 Score: 97.8 bits (242), Expect = 9.720e-23
Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   14 VSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 121
            + R+E  LKE+S+++      +  + A+++  V   +N    G  VAKLPFIP  ++QK+SHRG++GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G   A PF
Sbjct:   74 IDRVETSLKESSRDLSLFKFKSGAVVALILFAVFGFLNSLYEGKAVAKLPFIPLRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGPF 181          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: K7W5R9_SOLTU (Calcium load-activated calcium channel n=4 Tax=Solanum TaxID=4107 RepID=K7W5R9_SOLTU)

HSP 1 Score: 96.7 bits (239), Expect = 3.000e-22
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   14 VSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 121
            + R+E  LKE+++++      +  + AVV+ MV   +N    G VVAKLPFIPF L+QK+SHRG+ GDD TDCS+AFL+ LC   ++ N+ K +G   P+G   A  F
Sbjct:   79 IDRVETSLKESTRDLSLFKFKSGFVVAVVLFMVFGFLNSLFEGKVVAKLPFIPFRLVQKMSHRGLPGDDMTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGSAGAGLF 186          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A1S4CK71_TOBAC (Calcium load-activated calcium channel n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CK71_TOBAC)

HSP 1 Score: 96.3 bits (238), Expect = 3.670e-22
Identity = 47/118 (39.83%), Postives = 72/118 (61.02%), Query Frame = 0
Query:    4 EKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 121
            E K+    + + R E  LK++S+++      +  + A+V+ MV   +N    G VVAKLPF+PF +IQK+SHRG+ G+D TDCS+AFL+ LC   ++ N+ K +G   P+G   A  F
Sbjct:   63 ESKKPNKSKKIDRFETSLKDSSRDLSLFKFKSGFVVAIVLFMVFAFLNSLFEGKVVAKLPFVPFRIIQKMSHRGLSGNDMTDCSMAFLYLLCSMSIRTNLQKFLGFSPPRGAAGAGLF 180          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A5N6Q310_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q310_9ASTR)

HSP 1 Score: 94.7 bits (234), Expect = 3.760e-22
Identity = 46/114 (40.35%), Postives = 72/114 (63.16%), Query Frame = 0
Query:   14 VSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPFSEMSAA 127
            + R+E  LKE+S+++    + +  + A+V+ +V   +N    G VVAKLPF+P  ++QK+SHRG++GDD TDCS+AFL+ LC   ++ N+ K +G   P+G   A  F    AA
Sbjct:   19 IDRVETSLKESSRDLSLFKLKSGAVVALVLFVVFGFLNNLFEGKVVAKLPFVPIRIVQKMSHRGLQGDDMTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGLFQIPDAA 132          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A835M2R9_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835M2R9_9MAGN)

HSP 1 Score: 93.2 bits (230), Expect = 1.500e-21
Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 0
Query:    6 KREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 121
            K+ K+++ + R+E  LKE+++++      +  + AVV+ +V   +N    G  VAKLPF P +L+QK+SHRGI GDD TDCS+AFL+ LC   ++ N+ K +G   P+G   A  F
Sbjct:   12 KKTKTKKKIDRVESSLKESTRDLSLSKFKSGAVVAVVLFVVFGLLNTLFEGKSVAKLPFHPITLVQKMSHRGISGDDATDCSMAFLYLLCSVSIRTNLQKFLGFSPPRGAANAGLF 127          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2R6R539_ACTCC (Calcium load-activated calcium channel n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6R539_ACTCC)

HSP 1 Score: 94.7 bits (234), Expect = 1.560e-21
Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 0
Query:   14 VSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPF 121
            + R+E  LKE+S+++      +  + AVV+ +V   +N    G  VAKLPF+P  ++QK+SHRG++GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G   A  F
Sbjct:   76 MDRVETSLKESSRDLSLFKFKSGAVVAVVLFVVFGLLNSLFEGKAVAKLPFVPIRIVQKMSHRGLQGDDPTDCSMAFLYFLCSINIRTNLQKFLGFSPPRGAAGAGLF 183          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2P5C5L7_TREOI (Calcium load-activated calcium channel n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5C5L7_TREOI)

HSP 1 Score: 94.0 bits (232), Expect = 3.170e-21
Identity = 44/101 (43.56%), Postives = 67/101 (66.34%), Query Frame = 0
Query:   14 VSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 114
            + R+E  LKE+S+++      +  + A+V+ +V   +N    G VVAKLPF PF L+ K+SHRG++GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   78 IDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 178          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2G2Y0W8_CAPAN (Calcium load-activated calcium channel n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G2Y0W8_CAPAN)

HSP 1 Score: 94.0 bits (232), Expect = 3.730e-21
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   14 VSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 114
            + R+E  LKE+++++      +  + A V+ MV   +N    G VVAKLPF+PF L+QK+SHRG+ GDD TDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   83 IDRVESSLKESTRDLSLFKFKSGFVVAFVLFMVFGFLNSLFEGKVVAKLPFVPFRLVQKMSHRGLPGDDMTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 183          
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Match: A0A2J6LTV4_LACSA (Calcium load-activated calcium channel n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LTV4_LACSA)

HSP 1 Score: 93.2 bits (230), Expect = 5.610e-21
Identity = 45/118 (38.14%), Postives = 72/118 (61.02%), Query Frame = 0
Query:   14 VSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGVNKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGVKEANPFSEMSAASEEQ 131
            +SR+E  LK++S+++      +  + A+V+ +V   +N    G  V KLPF+P S++QK+SHRG++GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G      F    A+   Q
Sbjct:   70 ISRVETSLKDSSRDLSLSKFKSGAVVALVLAVVFGVMNSLYEGKAVGKLPFVPVSIVQKMSHRGLRGDDPTDCSMAFLYFLCSMSIRTNLQKFLGFSPPRGAAGPGLFQVPDASDTNQ 187          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.28.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G127_ECTSI8.120e-5467.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A118JTC9_CYNCS9.720e-2341.67Calcium load-activated calcium channel n=1 Tax=Cyn... [more]
K7W5R9_SOLTU3.000e-2244.44Calcium load-activated calcium channel n=4 Tax=Sol... [more]
A0A1S4CK71_TOBAC3.670e-2239.83Calcium load-activated calcium channel n=4 Tax=Nic... [more]
A0A5N6Q310_9ASTR3.760e-2240.35Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A835M2R9_9MAGN1.500e-2140.52Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]
A0A2R6R539_ACTCC1.560e-2141.67Calcium load-activated calcium channel n=3 Tax=Act... [more]
A0A2P5C5L7_TREOI3.170e-2143.56Calcium load-activated calcium channel n=1 Tax=Tre... [more]
A0A2G2Y0W8_CAPAN3.730e-2143.56Calcium load-activated calcium channel n=4 Tax=Cap... [more]
A0A2J6LTV4_LACSA5.610e-2138.14Calcium load-activated calcium channel n=2 Tax=Lac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..146
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 5..110
e-value: 1.5E-17
score: 63.8
IPR008559Calcium load-activated calcium channelPANTHERPTHR20917PNAS-RELATEDcoord: 4..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig99contigA-nodosum_M_contig99:260226..261736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig99.28.2mRNA_A-nodosum_M_contig99.28.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig99 259359..262388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig99.28.2 ID=prot_A-nodosum_M_contig99.28.2|Name=mRNA_A-nodosum_M_contig99.28.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=147bp
MDNEKKREKSQRTVSRLEKDLKEASKEIQALGMSTKLITAVVVMMVMLGV
NKSCSGMVVAKLPFIPFSLIQKISHRGIKGDDPTDCSVAFLFALCQAGVK
GNIAKLVGVGQPKGVKEANPFSEMSAASEEQHTKAQITKAQSTKAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008559TMCO1