mRNA_A-nodosum_M_contig9853.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.520e-78 Identity = 117/162 (72.22%), Postives = 137/162 (84.57%), Query Frame = 1
Query: 7 VVGNMQEEIKKALLPIIHYQVDLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIFTLITKTAARV 492
VVGNMQEEI KA LPIIHY +DLW C+VSGRK+LG HV YVDS+F+L+HAL+ VKHYAPS+E+Q EKAS ILFTIF+ATL EYGI ++DLAGGTTDSG DVKAMCVN LL LH + WDWCDCHLA K+AE+ FGTSADPQ+SKN AR + L+ KTAA++
Sbjct: 205 VVGNMQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKI 366
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 219 bits (558), Expect = 2.670e-64 Identity = 104/164 (63.41%), Postives = 126/164 (76.83%), Query Frame = 1
Query: 1 QAVVGNMQEEIKKALLPIIHYQVDLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIFTLITKTAARV 492
+AVVGNM EI++A LPI+HY +DLW C+++G K++ HV YV+S+ LQH LL VKHYAPS+ VQ KAS ILF +F + LRE+G+ I+DLAGGTTDSG DVKAMCVNFLLA H WDWC CHLA +AAE AFGTSADPQK KN AR + L+ K AA+V
Sbjct: 222 KAVVGNMLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKV 385
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6H5JN28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN28_9PHAE) HSP 1 Score: 154 bits (389), Expect = 3.080e-44 Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 19 MQEEIKKALLPIIHYQVDLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSA 420
M EI++A LPI+HY +DLW C+++G K++ HV YV+S+F LQ+ALL VKHYAPS+ VQ +KAS ILF +FK+ LRE+G+ I+DLAGGTTDSG DVKAMCVNFLLA H V + HL AE + +A
Sbjct: 1 MLTEIERAPLPIVHYGIDLWQCKITGLKYIDGHVCYVNSNFELQYALLSVKHYAPSAAVQVTDKASEILFIVFKSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKVSQEIERYHLLYITAEEGYERAA 134
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 162 bits (410), Expect = 6.680e-44 Identity = 76/109 (69.72%), Postives = 90/109 (82.57%), Query Frame = 1
Query: 166 VKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIFTLITKTAARV 492
VKHYAPS+ VQ EKASG+LFT+F++ L E+GI ++DLAGGTTDSG D+KAMC NFLLA H+V WDWC CHLA +AAE AFGTSADPQKSKN AR + +LI K AA+V
Sbjct: 82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKV 190
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 159 bits (402), Expect = 8.380e-43 Identity = 77/148 (52.03%), Postives = 101/148 (68.24%), Query Frame = 1
Query: 19 MQEEIKKALLPIIHYQVDLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIF 462
M EE++ A LPI+H+ +D+WA + SGRKFLG HV YV ++F L+ LL +K Y PS + + KA+ +L I +A L E+G +DLA GTTDSG DVK++ VN L + V W+WC CHL KAAE AFGT DPQKSKNP A ++
Sbjct: 1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNML 148
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 146 bits (368), Expect = 5.030e-39 Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 1
Query: 1 QAVVGNMQEEIKKALLPIIHYQVDLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIF 462
+AV+G+M E++ A LPI+H+ +D+W + SGRKFLG H+ YV ++F L+ AL+ K A+ +L I ++ L E+G+ +DLA GTTDSG DVK++ VN L + V W+WC CHL KAAE AFGT DPQKSKNP R +
Sbjct: 165 KAVLGDMLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALISAK-------------AAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKML 305
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: G4YIY2_PHYSP (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIY2_PHYSP) HSP 1 Score: 92.4 bits (228), Expect = 4.160e-19 Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = 1
Query: 70 DLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIFTLITKTAARV 492
DLW + SG KFLG +++V + F L LLG +H+ P +D I + L ++G+++AD G TTD GPDV+ M + L+ + W+WC HL A + AFG +++ KSKNP + +T+T +V
Sbjct: 131 DLWKAKSSGTKFLGLRLYFVTADFKLVSVLLGTRHFQPLYGERDGGIRGPFKRWIIQ-NLADFGLTVADFFGATTDGGPDVQHMMTSNLI----ISWEWCMPHLTNAATKAAFGMTSNVGKSKNPEMLQLLKKVTQTVYQV 266
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6A4ARC5_9STRA (Uncharacterized protein (Fragment) n=5 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4ARC5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 8.150e-19 Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = 1
Query: 70 DLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIFTLITKTAARV 492
D W + SG KFLG +++V + F L LLG +H+ P +D I + L ++G+++AD G TTD GPDV+ M + L+ + W+WC HL A + AFG +++ KSKNP + +T+T +V
Sbjct: 63 DFWKAKSSGTKFLGLRLYFVTADFKLVSVLLGTRHFQPLYGERDGGIRGPFKRWIIQI-LADFGLTVADFFGSTTDGGPDVQHMMTSNLM----LSWEWCMPHLTNAATKAAFGMTSNVAKSKNPEMLQLLKKVTRTVYQV 198
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6A3H0H3_9STRA (Uncharacterized protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3H0H3_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.440e-18 Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = 1
Query: 70 DLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIFTLITKTAARV 492
D W + SG KFLG +++V + F L LLG +H+ P +D I + L ++G+++AD G TTD GPDV+ M + L+ + W+WC HL A + AFG +++ KSKNP + +T+T +V
Sbjct: 63 DFWKAKSSGTKFLGLRLYFVTADFKLVSVLLGTRHFQPLYGERDGGIRGPFKRWIIQI-LADFGLTVADFFGATTDGGPDVQHMMTSNLM----LSWEWCMPHLTNAATKAAFGMTSNVAKSKNPEMLQLLKKVTRTVYQV 198
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Match: A0A6A3RTL3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3RTL3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.420e-16 Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 1
Query: 70 DLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVKHYAPSSEVQDKEKASGILFTIFKATLREYGISIADLAGGTTDSGPDVKAMCVNFLLALHDVCWDWCDCHLATKAAEHAFGTSADPQKSKNPGARSIFTLITKT 480
D W + SG KFLG +++V + F L LLG +H+ P +D I + L ++G+++AD G TTD GPDV M + L+ + W+W HL A + AFG +++ KSKNP + +T+T
Sbjct: 315 DFWKAKSSGTKFLGLRLYFVTADFKLVSVLLGTRHFQPLYGERDGGIRGPFKRWIIQI-LADFGLTVADFFGATTDGGPDVMHMMTSNLM----LSWEWSMPHLTNAATKAAFGMTSNVAKSKNPEMLQLLKKVTRT 446 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9853.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9853.1.1 >prot_A-nodosum_M_contig9853.1.1 ID=prot_A-nodosum_M_contig9853.1.1|Name=mRNA_A-nodosum_M_contig9853.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=158bp MQEEIKKALLPIIHYQVDLWACEVSGRKFLGTHVHYVDSSFNLQHALLGVback to top mRNA from alignment at A-nodosum_M_contig9853:7250..8031+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9853.1.1 ID=mRNA_A-nodosum_M_contig9853.1.1|Name=mRNA_A-nodosum_M_contig9853.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=782bp|location=Sequence derived from alignment at A-nodosum_M_contig9853:7250..8031+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9853:7250..8031+ >mRNA_A-nodosum_M_contig9853.1.1 ID=mRNA_A-nodosum_M_contig9853.1.1|Name=mRNA_A-nodosum_M_contig9853.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at A-nodosum_M_contig9853:7250..8031+ (Ascophyllum nodosum dioecious)back to top |