mRNA_A-nodosum_M_contig96.19.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE) HSP 1 Score: 763 bits (1970), Expect = 1.900e-262 Identity = 440/708 (62.15%), Postives = 522/708 (73.73%), Query Frame = 1
Query: 379 QHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRES----GVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESP-------------------------------------------AEGGGREEEKVDESAPPAL--LEVMTSRNGCKLLLRLLAPEHTGYLHPEELELLKPTMIPASA----------------PKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQLGYGDFGAKAAKA 2307
Q RP+FDTV R+K+IWNKLRERKVP ++RAKLVQELL+LIKGKV IA+KHDASRVVQTALQFGN+EERL++L E+EGH+ +LSQL Y+H IV RLF++ KG EEQKR+AK FRG V+LATHAIGA VVQTAL SLP ASA LIKSEFYGKE+ALF D D+QP +LKAVL++RPDRRAVVM HV+ VI KLLSKGLMKF+FAHDLLWEY QEATP ++QE+VP+L++ Y++LLSTR GSM AA+CAA+GGAKERKRMMR+LKG+V ASL+HRD+Y+AVIRLVESVDDT+TCQK ILAELLKP EV+ + + VPK GKGTSAEEWVP+GTTAP+G +GGV+ A DGVTGMDV+ EG E +A P L + VM +NGCKLLLRLLAP+HTGYLHPEELELLKPTM+P+ A PK G GTEV LVPSS+KE SVR+RELLA+LREPLRE CA+HA LMRSK AG++VLLEAIR IGTPQ+V AV +AAC KP G+LPM ED + HLFMKQLL+REA AQ+A A S L SFA+ALL++AGG+L +W+ +NRGAFVV AL +VPS A VR+ LG KAAR+++V A EGNN+G KVLAE+LG+GDFGAK A A
Sbjct: 143 QQRPQFDTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTD-DNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYILLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLMHRDAYIAVIRLVESVDDTVTCQKAILAELLKPKEVTPKTTPAGNSVPKAGKGTSAEEWVPRGTTAPKGNS-DGGVAAAG----DGVTGMDVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGDAMEXXXXXAAASPRLPLVGVMCHKNGCKLLLRLLAPDHTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXPKAGGE-------GTEVPLVPSSRKEASVRRRELLAFLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPQVVAAVVKAACGKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKDGADSAADTSDTL---SFADALLEKAGGQLSAWISTNRGAFVVTALAEVPSTGAAVREELGTKAARARLVMEA-TEGNNMGTKVLAERLGFGDFGAKEAAA 833
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: D7FHP3_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP3_ECTSI) HSP 1 Score: 686 bits (1770), Expect = 7.950e-233 Identity = 410/694 (59.08%), Postives = 491/694 (70.75%), Query Frame = 1
Query: 379 QHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESA-----------------------------PPAL--LEVMTSRNGCKLLLRLLAPEHTGY-----LHPEELELLKPTMIPASAP-----------------KTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTA--PSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQLGYGDFGAK 2295
Q RP+F+TV R+K+IWNKLRERKVP ++RAKLVQELL+LIKGKV IA+KHDASRVVQTALQFGN+EERL++L E+EGH+ +LSQL Y+H IV RLF++ KG EEQKR+AK FRG V+LATHAIGA VVQTAL SLP ASA LIKSEFYGKE+ALF D D+QP +LKAVL++RPDRRAVVM HV+ VI KLLSKGLMKF+FAHDLLWEY QEATP ++QE+VP+L++ Y++LLSTR GSM AA+CAA+GGAKERKRMMR+LKG+V ASL H D +V+ D + + T + VPK GKGTSAEEWVP+GTTAP+G PE GV+ A DGVTGMDV+ G E+E PP L + VM NGCKLLLRLLAP+ TGY LHPEELELLKPTM+P+ A K G GTEV LVPSS+KE SVR+RELLAYLREPLRE CA++A LMRSK AG++VLLEAIR IGTP++V AV +AACAK G+LPM ED + HLFMKQLL+REA AQ+A A DS+ T+ PSFA+ALL++AGG+L SW +NRG FVV AL +VPS A VR+ LG K AR+++V A EGNN+G KVLAE+LG+GDFGA+
Sbjct: 144 QQRPQFNTVKRSKEIWNKLRERKVPPEERAKLVQELLQLIKGKVMDIALKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTD-DNQPHSLKAVLKARPDRRAVVMAHVNGVITKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLTHSD-------VVKQADHLVAPKTTAAGNI------------VPKAGKGTSAEEWVPRGTTAPKG-NPERGVAAAG----DGVTGMDVE-------GEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGLPLVYVMGHTNGCKLLLRLLAPDRTGYAFFRYLHPEELELLKPTMVPSPAAAXXXXXXXXXXXXXXXTKAGGQ-------GTEVPLVPSSRKEASVRRRELLAYLREPLREACATYAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKSHVGKLPMHEDPSAHLFMKQLLEREAEAQKAKGGA-----DSAAATSDTPSFADALLEKAGGQLSSWSSTNRGGFVVTALAEVPSTGAAVREELGTKTARARLVKEA-TEGNNMGTKVLAERLGFGDFGAR 792
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA) HSP 1 Score: 506 bits (1303), Expect = 6.920e-162 Identity = 326/696 (46.84%), Postives = 410/696 (58.91%), Query Frame = 1
Query: 361 LKLERQQHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDG--DSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATP-----ARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTE--VSIRESGVP------KVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDE------DGVTGM---------------------------DVDESPAEGG----GREEEKVDESAP-------------------------------PALLEVMTSRNGCKLLLRLLAPEHTGYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLT-APSFAEALLDRA----GGELVSWVGSNRGAFVVAALEQVPSASARVRKVL 2184
LK ERQ HRP+ DTV RAK++WNKLRERK+ + RA LV+EL++L++GKV I+MKHDASRVVQ+A+ FG+ +R +L ELEGHLVELSQL Y+H IV +L + A+G EEQ+R+ K RGH +LATH+IGA V+Q A+ LP+A A +++E YG E ALF D D PR LK V+ RPDRRA+V++ V +GK+ KGL+ F FAH LLWEY E A I +MVP +++ Y+ LLSTR GS AA+CAAYG AK+RKRMM+ KG V SL+HRD+Y+AV+RLV SVDDT+TCQK++LAELL P V+ +GV K G+G +AE WVPKG G +A ++D+ DG+T + +ES E G EEE D PALL V RNGCKLLL L AP+ T YL PEE LL+P M+P + + G LV +SKK+P VR++ELLA+L+ PL+ +C H ELMRSKFAGA VLLE + + TP LV A+A AA A P +G L M ED AGHLFMKQLL E G++ A FA+ALL R GG L W GSNRGAFV+AAL VPSA A VRK L
Sbjct: 153 LKKERQAHRPDNDTVVRAKELWNKLRERKITEEQRAPLVRELMQLLRGKVYKISMKHDASRVVQSAVTFGSNTDRDLILTELEGHLVELSQLQYAHFIVLKLLQRARGAEEQRRVTKDLRGHVAKLATHSIGARVIQQAMDMLPSARAAQLRAELYGPEHALFADMAFDKAPRNLKQVIALRPDRRAIVLEGVKRTLGKIAQKGLLSFAFAHSLLWEYMSEVNVNSDGGAAIADMVPTVIDGYMALLSTRDGSRAAALCAAYGSAKDRKRMMKGFKGFVGTSLMHRDAYLAVLRLVASVDDTVTCQKSVLAELLVPLPRPVAAAVTGVTASGAAVKPGEGVTAEAWVPKGVAR------SSGTGEAVVEDDEDGGEFDGMTDEFDGXXXXXXXXXXXXXXXXXXXXXQQDEAEESDIEAGEDEAAAEEETTDAVGAQGDADTSAQAALXXXXXXXXXXXXXXXXXXAPALLPVSLHRNGCKLLLYLAAPDATKYLDPEERHLLEPAMVPVAQGE-----------GEAPVLVCASKKDPEVRRQELLAFLKAPLQSLCQEHTAELMRSKFAGANVLLEVTKNLRTPDLVAAIAAAAVAVPEEGHLAMQEDPAGHLFMKQLLLWE-----------GEQXXXXXXXXAGWFADALLKRLQAGDGGGLRGWAGSNRGAFVLAALAGVPSAGAAVRKAL 820
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A7S2FGZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FGZ7_9STRA) HSP 1 Score: 300 bits (767), Expect = 3.270e-86 Identity = 234/664 (35.24%), Postives = 351/664 (52.86%), Query Frame = 1
Query: 325 EGDGLPSNKKRRLKLERQQHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDA-KGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRT------------LKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTGYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGI--GTPQLVQAVAQAACAKPLDG-QLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGD--ETDSSPLTAPSFAEALLDRAGGELVSW-VGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVL 2259
E G P+NKKR L+ +RQ R + TV K +WN+LR + R LV +L + +KG P +A+KHDASR+VQ+ L+FG ++RL ++ E+ LVELS+ Y+H +V +L A + P+ Q++L K RG+ +AT A+ A +V+ AL +L A ++ E YGKE+ +F D ++ +T + A+L +P + +++ + + GK + KGL+ F++ H+LL E+ A++ E++P +L LVLLSTR G+ AK+R++ +++LKGH V L HRD+Y+AV+R+V+ +DDT+ Q+++LAEL + R + K+ S + K A G K + D V D D PA G + + P LL+V NG K+LLRLLAP YL P ++ L + G +E GT SKK P R+ ELLAYL+ PL +C + L+ S G+ +LLE + L AVA+ C+K DG P+F+ LF+K+ L+ E Q + A G+ D+ P S A AL++ A GEL W SNRGAFVV AL +VP+ SA VRK L +SK GAKA+ + V +L
Sbjct: 57 EAAGGPANKKRALRFDRQSGRKHYSTVTDGKVVWNELRAKSCDPARRTTLVNDLHKALKGNYPEVALKHDASRLVQSVLEFGTSDQRLDIMGEVAPRLVELSRSTYAHFVVVKLLDLADRDPKLQQQLHKALRGNIRMMATSAVAARIVELALGNLKNAFT--LRLELYGKEYGVFTD-EALSKTPAYDAKGQRNSIVAAILALKPQSKPGLLEGLAVLCGKFVKKGLLAFEYVHELLDEFVGHCDEAQMAELLPSILNNALVLLSTRPGTRVVVAALGLSIAKDRRKFLKALKGHGVQLLTHRDAYLAVLRIVDVMDDTVALQRSLLAEL------TTRATSDGKISANPSLDADGGKAALASMG--------KGTQPNTDDVD--DDDSCPAAG-----DTTASAGPMPLLDVALHTNGSKMLLRLLAPTKEKYLDPWDITAL-----------SGGVAE-----GT-------SKKAPETRRGELLAYLQAPLLALCEENPATLITS-IPGSNILLEIFASMPDDVATLAAAVAKCVCSKAEDGGTAPLFDQKVVQLFLKRALQLEIGGQSVEGRADGEGERHDTHPS---SLARALVETASGELSDWCTQSNRGAFVVEALLKVPAVSAAVRKEL----KKSKKAIGAKAKTSKVVASIL 665
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A7R9U7V4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7V4_9STRA) HSP 1 Score: 277 bits (709), Expect = 3.830e-78 Identity = 210/632 (33.23%), Postives = 325/632 (51.42%), Query Frame = 1
Query: 397 DTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGP---EEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQ-PRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTGYLHPEELE-LLKPTMIPASAPKTSGSSEASPAAGTEVKL-VPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIG-----------TPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVS-WVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGN 2238
+ V+R ++WN+LR+R+V +DR KLV E+ L++GK A+++KHD SRVVQ + FG E+ +L E+E + +L Y+H +V +L + P + ++R+ K+ GH +RL H++GA VV+TAL LP A + EFYG+E L GD++ L +L+ RPDRR ++ V ++ K++ KGL +F F +LL EY + A PA+I ++VP L E + LL +R GS AA+ AAY GA+ER++M+++LKGHV + + HRD+Y+ +++LV DDT++ +K +LAE+ + EE+ G EEK E L MTS+ L LLAP Y H + ++ L++P+M+P P+ +P ++ V +SKK P R RE+LA+LR L + A HA ++ + G L+ A R T Q A+ + +G LP +E HL +K LL EA A+PA + D S APS A+A + EL+ ++ NRGAFV+ AL +V S +++V + + S VV G+ A+GN
Sbjct: 58 EEVSRLLRLWNQLRDRQVSSEDRRKLVNEVASLMRGKYAAMSLKHDVSRVVQAVVSFGTAEQVDEVLVEVEPRIFDLCVSPYAHFLVIKLLKSVAQPRRRDSRRRMVKLLSGHMLRLGVHSVGARVVETALEELPKPDARRLNREFYGREHLLATGGDAEGSHRLDGLLKLRPDRRETILTRVWGLLSKMIDKGLCQFVFVQELLCEYLECAGPAQIAKVVPSLAEHAVALLVSRNGSKAAAMLAAYSGARERRKMIKALKGHVKSCIFHRDAYMFLLKLVSVTDDTVSVKKNLLAEIFAKED-----------------EEFTATG----------------------------------------EEKAAEHTTEML---MTSQPTTLFFLWLLAPSTNRYFHDDAVKKLMQPSMLP---PEGVTVGLGTPLEEVDMSSWVNTSKKTPEQRNREVLAFLRGHLVGLAAEHAQVMLYNAHGGRLLYEIAKRWPSENLHAKILDEMTKMPEQRGAEQERNEDAEGDLPAWEHPKAHLILKWLLLAEAEDASANPAGDEEGEDES-HEAPSLAKAFAGQMSDELLEQYLSCNRGAFVIEALSKVASVASQVLDRVASLIETSDVVKGSLAKGN 625
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A448Z1A3_9STRA (PUM-HD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1A3_9STRA) HSP 1 Score: 273 bits (698), Expect = 4.060e-77 Identity = 203/626 (32.43%), Postives = 312/626 (49.84%), Query Frame = 1
Query: 343 SNKKRRLKLERQQHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDEL---EGHLVELSQLMYSHHIVQRLFRD-AKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPD--RRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELL-KPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTG---YLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGA 2190
S +KR ++ ERQ R ++V AK +WNKLR + ++D KL+++++ LI+GKV IA++HDASRVVQ A+QFG+ +R +L+E+ EG L E++++ Y+H + + + A+ K + K F+G +LA H +GA VV++ ++LP+ +K EFYG F+LF + +LK+ +E+ ++ +D V +I K ++K F + L EY + A P+ I+ + + + + LLSTR G+ A CA+YG K+RKR +SLKG+ +SL+HRD+Y+A++RLV+ DDT++ QK++L E+L KP E + E+G A LLE+ S G KL L LL + Y P E +L+P K VP+SKK+P R+RELL ++R+ L E C HAG+L+RS G+ VL E + +L AVA+ CA +D +FED H +K L+ ++ + E A + AL+D+ G L SNRGAFV AAL +VP V+K GA
Sbjct: 49 SAQKRLVRKERQATRRHAESVTEAKALWNKLRMKTNTKEDTQKLMEKVMDLIRGKVREIALQHDASRVVQAAIQFGSDAQRKEILEEICRSEGSLGEMAKIQYAHFVSLKFIKYCARDEASVKLIVKSFKGEMPKLAVHGVGARVVESIFLNLPSKLTAPLKQEFYGPHFSLFAKDLTSAPSLKSNIENAKTETQKKSAIDFVQAIINKGMTKSFYGFTYFQQLFAEYVEVADPSEIRSISSSVADHSIHLLSTRVGTRVVAACASYGTPKDRKRSCKSLKGYTSSSLLHRDAYLALLRLVQVTDDTVSIQKSVLNEILTKPKEGNDEENG----------------------------------------------------------------AKNGLLELALSDTGSKLFLMLLVEDDESRMKYFDPYERSILEPVATIRENGKD----------------VPTSKKDPDTRRRELLKHIRDALLETCTDHAGDLLRS-LPGSRVLKEVYASAPSQKLADAVAE-TCATSMD---EVFEDPIAHRSVKSLVLCDSESDE---------------KAACVSRALVDKLGKRLPDVARSNRGAFVAAALFRVPGVKDEVKKAFGA 574
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: B5YP90_THAPS (RNA-binding protein of the pumilio family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YP90_THAPS) HSP 1 Score: 267 bits (682), Expect = 3.090e-74 Identity = 222/704 (31.53%), Postives = 326/704 (46.31%), Query Frame = 1
Query: 340 PSNKKRRLKLERQQHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDEL-------------EGH----LVELSQLMYSHHIVQRLFRD-AKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALF-------DDGDSQPR------TLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQE-MVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTG---------------YLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQ---------LPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNN----VGVKVLAEQL 2271
PSNKKR LK ERQ HR TV AK+IWN+LR + D +KL EL L +GK+ +AM+HDASR+VQ +QFGN+ ER + EL +GH L EL ++ Y+H +V ++ + A+ + K + K R +LA H++G+ VV+ + P+ + +K E YG ++ALF DG S+ TL + +E+ PD+ + H+ ++ K L K L F + H LL++Y A+P I++ + P L E L L+STRAG+ CAAYG K+RK+M++ KG+ +SL+HRD+Y+A++R+V+ +DDT+ K +LAEL ++ PK P +L+++ S G K+ YL P E+E+L +P + VP+SKKE R++EL+ YL+E L + C H ELMRSK AG+ VL+EA + +L AV + CA ++ LP+ ED GHL +K L EA D A + DE D+S A D+ L +NRGAFV++AL VPS V+K L K ++ AK GN+ G VL E L
Sbjct: 46 PSNKKRALKAERQSHRKHATTVRTAKEIWNELRIKTNTSDQNSKLATELYGLFEGKMMEVAMQHDASRMVQAVIQFGNKNERGETVRELCGVSGGAVQKEESKGHGTVNLAELCKIQYAHFVVLKMIKYCARDEDSVKLIVKSLRKQMTKLAVHSVGSRVVELLFATFPSKATAPLKLELYGPQYALFATSNPTPTDGKSKSSISPTLPTLASFIETNPDKLESTLTHLQTLLQKGLDKHLTGFAYFHSLLFDYVSIASPNDIRDFLTPALAEHSLHLISTRAGTKVVCECAAYGSVKDRKKMLKCFKGYTRSSLLHRDAYLAILRMVDVMDDTVLVNKMLLAEL--------HQNSDPKAXXXXXXXXXXXX------------------------------------------------XPSPILDLVLSDTGSKMFXXXXXXXXXXXXXXXXXXXXSKWQKYLDPYEIEVL----------------HRNPTVTDNGESVPTSKKEDETRRQELVVYLKELLVDACVKHTEELMRSK-AGSKVLIEACESFPSEELYNAVLE-VCADSMENDSMDEEGGKALPILEDPVGHLTLKHLFLAEA---RNDSAGV-DEDDTS------LARMFYDKFQSNLGDIASTNRGAFVLSALIAVPSVKEDVKKTL--KGHTKEITQQAKKGGNDGKKLAGCSVLLEAL 663
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A1E7FCX4_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCX4_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.700e-72 Identity = 207/675 (30.67%), Postives = 326/675 (48.30%), Query Frame = 1
Query: 331 DGLPSNK-KRRLKLERQQHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDEL---EGHLVELSQLMYSHHIVQRLFRD-AKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPD--RRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELL-KPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPE---HTGYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQL-----------------PMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQL 2271
+GL S+ KR+++ +RQ R D+VA AK +WNKLR + + D L+ +++ LI GKV IA++HDASRVVQ A+QFGN ++R +L E+ EG L E++++ Y+H +L + A+ K + K F+G +LA H +GA V+++ ++LP +K EFYG F+LF S TLK+ +E+ ++ +D V ++ K ++K + + L EY P+ I+ + + + + LLSTR G+ A CA+YG K+RKR+ +SLKG+ +SL HRD+Y+A++RL++ DDT++ QK++L E+L KPT+ + ES + A+L+V S G KL L LL + Y P E +L+P + K +GS VP+SKK+P R+ ELL ++++PL E C + EL+ S GA VL E + +L +A+ C LD +FE GH +K L+ + DE + P + + L+DR G L VGSNRGAFV AAL +VPS V+K +K + + +K++G+ G L +++
Sbjct: 39 EGLSSSALKRQVRKDRQSTRKHADSVAEAKTLWNKLRLKTNTKKDTEDLMDKVMTLIHGKVKEIALQHDASRVVQAAIQFGNDKQRKEILTEICKSEGSLAEMAKIQYAHFCCLKLIKYCARDDASIKMIVKSFKGEMPKLAVHGVGARVLESLFLNLPPKQTAPLKQEFYGPHFSLFVKDLSGVPTLKSNIETATTETQKKSAIDFVQAILNKGMAKSFYGYTYFQQLFAEYVDVVDPSEIRMISSTIADHSIHLLSTRVGTRVVAACASYGTPKDRKRICKSLKGYTTSSLQHRDAYLALLRLIQVTDDTVSIQKSVLNEILTKPTKENDAESTMNN----------------------------------------------------------------AILDVALSDTGSKLFLMLLVKDVETRLKYFDPYERSILEPI----ATIKENGSE------------VPTSKKDPETRRNELLKHIKDPLIEACTENVRELLNS-LPGARVLKEVYASAPSEKLAEAIVD-VCVASLDDATNANAGKKKEAKEDEILYSVFESPIGHRSIKNLI-------------LCDEESTKPFVS----KLLVDRLGKRLPEIVGSNRGAFVAAALCKVPSVKDAVKKTFNSK--KKDIEAKSKSKGSTAGYAALLKEM 612
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A7S2SB37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SB37_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.820e-71 Identity = 174/537 (32.40%), Postives = 271/537 (50.47%), Query Frame = 1
Query: 343 SNKKRRLKLERQQHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDA-KGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGD------SQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAEL-LKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPA-LLEVMTSRNGCKLLLRLLAPEHTG---YLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLD 1917
SNKKR LK ERQ HR D V K++WNK+R + +++ ++ GK +AM+HDASR+VQ A+QFGN ++RL ++ EL + ELS++ Y+H + ++ + + + K + K +GH +L HA+GA VV+ L + P +K E YG +FALF GD + TL+++++ +PD++ V + ++ ++I K + K L F + L EY +P I+ + P + + + LLSTR+G+ A CAAY KERKRMMRSLKG+ +SL H D+Y+A++RL++ DDT+T QK +L EL + PT ++ S VD G E+ D ++P + +LE+ S G KL L LL+ + Y P ELE+LKP P + +P+SKK S R+ ELL Y++ L E+C HA EL+ S+ G+ +L E + +L +++ K D
Sbjct: 42 SNKKRALKHERQSHRKHADIVVSGKELWNKMRLKSNTKEEITEMXXXXXXSFTGKFNDVAMQHDASRIVQAAIQFGNEDQRLIIVKELSSSISELSKVQYAHFAILKMIKYCVRNKDAMKIIVKSLKGHINKLCVHAVGARVVELLLATFPAKITAHLKLELYGPQFALFASGDLSASTSTNNPTLQSIIKEQPDKKEVAVQNILNIINKGIEKSLFSFAYFQRLFSEYVLAVSPNEIRAIAPSISDHAIHLLSTRSGARVVAECAAYSTPKERKRMMRSLKGYTRSSLKHADAYIALLRLIDVTDDTVTAQKLLLEELQVDPTAGKVKVS----------------------------------------------VD-------GTVEDNGDNNSPKSPILEIALSDTGSKLFLMLLSKDEERRKKYFDPSELEILKPN----------------PTVLENGEQIPTSKKNASTRRVELLRYMKNLLVELCTLHADELLFSR-PGSKILREVFETFPSKELSESIIDVCKRKNTD 508
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A4D9CTP5_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTP5_9STRA) HSP 1 Score: 253 bits (647), Expect = 8.750e-69 Identity = 220/692 (31.79%), Postives = 327/692 (47.25%), Query Frame = 1
Query: 334 GLPSNKKRRLKLERQQHRPEFDTVARAKQIWNKLRERKVPRDDRAKLVQELLRLIKGKVPAIAMKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFR-DAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALF--DDGDSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRN----------GCKLLLRLLAPEHT--GYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACA-------------------------------------------------------KPLDGQLPMF--EDAAG----HLFMKQLLKREAAAQEADPAAIGDETDSSP---LTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARV 2172
G P+NKKR +K ER + RP FD VARAK IW R +++ +D+R K+ +EL LIKGK+ IA+KHDA+RVVQ AL+ GNR ++ A + EL +L+E S++ Y+H IV RL A P E+KR+++VF G LATHA+GA+V++ + P +++E YG+E L D Q R L A+L P RR V+ +V +I K+L K L F +L+WEY A P ++E+VP LL+ L+L TR G A CAAYG K+RK+M+++LKG+VV +L+H+D+Y+ ++RL + +DDT+ K + ELL+ V EE + + T + + V L E T + DE E PA + + G +L G + P + + +P+S SS +P+ LVP+SKK+P +R+ ELLA L+ L E+ A L+ S G+ +L E L++A+A AA + K G+L E+AAG H + +KR + E ++P L P F+EAL + G + W+ S RG F+V AL +VP+ RV
Sbjct: 23 GGPANKKRHVKYERAKARPAFDLVARAKAIWAIFRSKRLGKDEREKMSEELYSLIKGKLHQIAVKHDAARVVQAALKHGNRIQQEAYITELLEYLLEFSKVQYAHFIVLRLLDVTASLPAERKRVSRVFTGKVHTLATHAVGAKVLEGIFSTYPKQDTQALRAELYGRETTLLLGDPTGPQGRDLAAILRELPGRRERVLSNVLGMIQKMLVKDLAVLPFVQELIWEYTCNAGPVLVRELVPTLLDYLLLLTGTRPGCKALAECAAYGTPKDRKKMLKALKGYVVPTLLHKDAYLLILRLADVIDDTVAFNKAVWQELLERNAV----------------EESMLRLATHVKASK----VLLCLLAPEKRGTFLMKDEV-------------ELLRPAFIPATEKKEXXXXXXXXXXGXELXXXXXXXXXXXXGVIRPRQ-----GSSLPSSPSSIPTSSVPAPS------LVPTSKKDPGLRREELLAPLKAALLELGKQQARTLLLSA-EGSFILYEVATRWRDAALLKAIAHAAASEGFQEQQVGSKEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVCGMGNKQGSGRLEAAREEEAAGPTREHRIAYKTIKRLILFEVGPKPGKKPECPATPVEKLPTPLFSEALYEECTGRWMDWLASMRGGFLVEALVKVPAVGVRV 669 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig96.19.2 >prot_A-nodosum_M_contig96.19.2 ID=prot_A-nodosum_M_contig96.19.2|Name=mRNA_A-nodosum_M_contig96.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=615bp MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRback to top mRNA from alignment at A-nodosum_M_contig96:293337..303814- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig96.19.2 ID=mRNA_A-nodosum_M_contig96.19.2|Name=mRNA_A-nodosum_M_contig96.19.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10478bp|location=Sequence derived from alignment at A-nodosum_M_contig96:293337..303814- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig96:293337..303814- >mRNA_A-nodosum_M_contig96.19.2 ID=mRNA_A-nodosum_M_contig96.19.2|Name=mRNA_A-nodosum_M_contig96.19.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1845bp|location=Sequence derived from alignment at A-nodosum_M_contig96:293337..303814- (Ascophyllum nodosum dioecious)back to top |