prot_A-nodosum_M_contig96.19.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.19.2
Unique Nameprot_A-nodosum_M_contig96.19.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length615
Homology
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE)

HSP 1 Score: 696 bits (1795), Expect = 6.160e-241
Identity = 403/660 (61.06%), Postives = 479/660 (72.58%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRES----GVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESP-------------------------------------------AEGGGREEEKVDESAPPAL--LEVMTSRNGCKLLLRLLAPEHTGYLHPEELELLKPTMIPASA----------------PKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQLGYGDFGAKAAKA 595
            +KHDASRVVQTALQFGN+EERL++L E+EGH+ +LSQL Y+H IV RLF++ KG EEQKR+AK FRG  V+LATHAIGA VVQTAL SLP ASA LIKSEFYGKE+ALF D D+QP +LKAVL++RPDRRAVVM HV+ VI KLLSKGLMKF+FAHDLLWEY QEATP ++QE+VP+L++ Y++LLSTR GSM AA+CAA+GGAKERKRMMR+LKG+V ASL+HRD+Y+AVIRLVESVDDT+TCQK ILAELLKP EV+ + +     VPK GKGTSAEEWVP+GTTAP+G   +GGV+ A     DGVTGMDV+                                               EG   E      +A P L  + VM  +NGCKLLLRLLAP+HTGYLHPEELELLKPTM+P+ A                PK  G        GTEV LVPSS+KE SVR+RELLA+LREPLRE CA+HA  LMRSK AG++VLLEAIR IGTPQ+V AV +AAC KP  G+LPM ED + HLFMKQLL+REA AQ+A   A      S  L   SFA+ALL++AGG+L +W+ +NRGAFVV AL +VPS  A VR+ LG KAAR+++V  A  EGNN+G KVLAE+LG+GDFGAK A A
Sbjct:  191 LKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTD-DNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYILLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLMHRDAYIAVIRLVESVDDTVTCQKAILAELLKPKEVTPKTTPAGNSVPKAGKGTSAEEWVPRGTTAPKGNS-DGGVAAAG----DGVTGMDVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGDAMEXXXXXAAASPRLPLVGVMCHKNGCKLLLRLLAPDHTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXPKAGGE-------GTEVPLVPSSRKEASVRRRELLAFLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPQVVAAVVKAACGKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKDGADSAADTSDTL---SFADALLEKAGGQLSAWISTNRGAFVVTALAEVPSTGAAVREELGTKAARARLVMEA-TEGNNMGTKVLAERLGFGDFGAKEAAA 833          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: D7FHP3_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP3_ECTSI)

HSP 1 Score: 620 bits (1600), Expect = 5.630e-212
Identity = 374/646 (57.89%), Postives = 448/646 (69.35%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESA-----------------------------PPAL--LEVMTSRNGCKLLLRLLAPEHTGY-----LHPEELELLKPTMIPASAP-----------------KTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTA--PSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQLGYGDFGAK 591
            +KHDASRVVQTALQFGN+EERL++L E+EGH+ +LSQL Y+H IV RLF++ KG EEQKR+AK FRG  V+LATHAIGA VVQTAL SLP ASA LIKSEFYGKE+ALF D D+QP +LKAVL++RPDRRAVVM HV+ VI KLLSKGLMKF+FAHDLLWEY QEATP ++QE+VP+L++ Y++LLSTR GSM AA+CAA+GGAKERKRMMR+LKG+V ASL H D       +V+  D  +  + T    +            VPK GKGTSAEEWVP+GTTAP+G  PE GV+ A     DGVTGMDV+       G E+E                                   PP L  + VM   NGCKLLLRLLAP+ TGY     LHPEELELLKPTM+P+ A                  K  G        GTEV LVPSS+KE SVR+RELLAYLREPLRE CA++A  LMRSK AG++VLLEAIR IGTP++V AV +AACAK   G+LPM ED + HLFMKQLL+REA AQ+A   A     DS+  T+  PSFA+ALL++AGG+L SW  +NRG FVV AL +VPS  A VR+ LG K AR+++V  A  EGNN+G KVLAE+LG+GDFGA+
Sbjct:  192 LKHDASRVVQTALQFGNQEERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTD-DNQPHSLKAVLKARPDRRAVVMAHVNGVITKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLTHSD-------VVKQADHLVAPKTTAAGNI------------VPKAGKGTSAEEWVPRGTTAPKG-NPERGVAAAG----DGVTGMDVE-------GEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGLPLVYVMGHTNGCKLLLRLLAPDRTGYAFFRYLHPEELELLKPTMVPSPAAAXXXXXXXXXXXXXXXTKAGGQ-------GTEVPLVPSSRKEASVRRRELLAYLREPLREACATYAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKSHVGKLPMHEDPSAHLFMKQLLEREAEAQKAKGGA-----DSAAATSDTPSFADALLEKAGGQLSSWSSTNRGGFVVTALAEVPSTGAAVREELGTKTARARLVKEA-TEGNNMGTKVLAERLGFGDFGAR 792          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA)

HSP 1 Score: 444 bits (1142), Expect = 3.150e-142
Identity = 293/642 (45.64%), Postives = 366/642 (57.01%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDG--DSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATP-----ARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTE--VSIRESGVP------KVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDE------DGVTGM---------------------------DVDESPAEGG----GREEEKVDESAP-------------------------------PALLEVMTSRNGCKLLLRLLAPEHTGYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLT-APSFAEALLDRA----GGELVSWVGSNRGAFVVAALEQVPSASARVRKVL 554
            MKHDASRVVQ+A+ FG+  +R  +L ELEGHLVELSQL Y+H IV +L + A+G EEQ+R+ K  RGH  +LATH+IGA V+Q A+  LP+A A  +++E YG E ALF D   D  PR LK V+  RPDRRA+V++ V   +GK+  KGL+ F FAH LLWEY  E        A I +MVP +++ Y+ LLSTR GS  AA+CAAYG AK+RKRMM+  KG V  SL+HRD+Y+AV+RLV SVDDT+TCQK++LAELL P    V+   +GV       K G+G +AE WVPKG           G  +A ++D+      DG+T                             + +ES  E G      EEE  D                                   PALL V   RNGCKLLL L AP+ T YL PEE  LL+P M+P +  +           G    LV +SKK+P VR++ELLA+L+ PL+ +C  H  ELMRSKFAGA VLLE  + + TP LV A+A AA A P +G L M ED AGHLFMKQLL  E           G++        A  FA+ALL R     GG L  W GSNRGAFV+AAL  VPSA A VRK L
Sbjct:  207 MKHDASRVVQSAVTFGSNTDRDLILTELEGHLVELSQLQYAHFIVLKLLQRARGAEEQRRVTKDLRGHVAKLATHSIGARVIQQAMDMLPSARAAQLRAELYGPEHALFADMAFDKAPRNLKQVIALRPDRRAIVLEGVKRTLGKIAQKGLLSFAFAHSLLWEYMSEVNVNSDGGAAIADMVPTVIDGYMALLSTRDGSRAAALCAAYGSAKDRKRMMKGFKGFVGTSLMHRDAYLAVLRLVASVDDTVTCQKSVLAELLVPLPRPVAAAVTGVTASGAAVKPGEGVTAEAWVPKGVAR------SSGTGEAVVEDDEDGGEFDGMTDEFDGXXXXXXXXXXXXXXXXXXXXXQQDEAEESDIEAGEDEAAAEEETTDAVGAQGDADTSAQAALXXXXXXXXXXXXXXXXXXAPALLPVSLHRNGCKLLLYLAAPDATKYLDPEERHLLEPAMVPVAQGE-----------GEAPVLVCASKKDPEVRRQELLAFLKAPLQSLCQEHTAELMRSKFAGANVLLEVTKNLRTPDLVAAIAAAAVAVPEEGHLAMQEDPAGHLFMKQLLLWE-----------GEQXXXXXXXXAGWFADALLKRLQAGDGGGLRGWAGSNRGAFVLAALAGVPSAGAAVRKAL 820          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A7S2FGZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FGZ7_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.710e-73
Identity = 208/598 (34.78%), Postives = 314/598 (52.51%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDA-KGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRT------------LKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTGYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGI--GTPQLVQAVAQAACAKPLDG-QLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGD--ETDSSPLTAPSFAEALLDRAGGELVSW-VGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVL 579
            +KHDASR+VQ+ L+FG  ++RL ++ E+   LVELS+  Y+H +V +L   A + P+ Q++L K  RG+   +AT A+ A +V+ AL +L  A    ++ E YGKE+ +F D ++  +T            + A+L  +P  +  +++ +  + GK + KGL+ F++ H+LL E+      A++ E++P +L   LVLLSTR G+           AK+R++ +++LKGH V  L HRD+Y+AV+R+V+ +DDT+  Q+++LAEL      + R +   K+    S +    K   A  G        K    + D V   D D  PA G     +    + P  LL+V    NG K+LLRLLAP    YL P ++  L           + G +E     GT       SKK P  R+ ELLAYL+ PL  +C  +   L+ S   G+ +LLE    +      L  AVA+  C+K  DG   P+F+     LF+K+ L+ E   Q  +  A G+    D+ P    S A AL++ A GEL  W   SNRGAFVV AL +VP+ SA VRK L     +SK   GAKA+ + V   +L
Sbjct:  123 LKHDASRLVQSVLEFGTSDQRLDIMGEVAPRLVELSRSTYAHFVVVKLLDLADRDPKLQQQLHKALRGNIRMMATSAVAARIVELALGNLKNAFT--LRLELYGKEYGVFTD-EALSKTPAYDAKGQRNSIVAAILALKPQSKPGLLEGLAVLCGKFVKKGLLAFEYVHELLDEFVGHCDEAQMAELLPSILNNALVLLSTRPGTRVVVAALGLSIAKDRRKFLKALKGHGVQLLTHRDAYLAVLRIVDVMDDTVALQRSLLAEL------TTRATSDGKISANPSLDADGGKAALASMG--------KGTQPNTDDVD--DDDSCPAAG-----DTTASAGPMPLLDVALHTNGSKMLLRLLAPTKEKYLDPWDITAL-----------SGGVAE-----GT-------SKKAPETRRGELLAYLQAPLLALCEENPATLITS-IPGSNILLEIFASMPDDVATLAAAVAKCVCSKAEDGGTAPLFDQKVVQLFLKRALQLEIGGQSVEGRADGEGERHDTHPS---SLARALVETASGELSDWCTQSNRGAFVVEALLKVPAVSAAVRKEL----KKSKKAIGAKAKTSKVVASIL 665          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A7R9U7V4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7V4_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.990e-68
Identity = 192/590 (32.54%), Postives = 294/590 (49.83%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDAKGP---EEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQ-PRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTGYLHPEELE-LLKPTMIPASAPKTSGSSEASPAAGTEVKL-VPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIG-----------TPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVS-WVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGN 572
            +KHD SRVVQ  + FG  E+   +L E+E  + +L    Y+H +V +L +    P   + ++R+ K+  GH +RL  H++GA VV+TAL  LP   A  +  EFYG+E  L   GD++    L  +L+ RPDRR  ++  V  ++ K++ KGL +F F  +LL EY + A PA+I ++VP L E  + LL +R GS  AA+ AAY GA+ER++M+++LKGHV + + HRD+Y+ +++LV   DDT++ +K +LAE+    +                 EE+   G                                        EEK  E     L   MTS+      L LLAP    Y H + ++ L++P+M+P   P+       +P    ++   V +SKK P  R RE+LA+LR  L  + A HA  ++ +   G L+   A R              T    Q  A+    +  +G LP +E    HL +K LL  EA    A+PA   +  D S   APS A+A   +   EL+  ++  NRGAFV+ AL +V S +++V   + +    S VV G+ A+GN
Sbjct:  100 LKHDVSRVVQAVVSFGTAEQVDEVLVEVEPRIFDLCVSPYAHFLVIKLLKSVAQPRRRDSRRRMVKLLSGHMLRLGVHSVGARVVETALEELPKPDARRLNREFYGREHLLATGGDAEGSHRLDGLLKLRPDRRETILTRVWGLLSKMIDKGLCQFVFVQELLCEYLECAGPAQIAKVVPSLAEHAVALLVSRNGSKAAAMLAAYSGARERRKMIKALKGHVKSCIFHRDAYMFLLKLVSVTDDTVSVKKNLLAEIFAKED-----------------EEFTATG----------------------------------------EEKAAEHTTEML---MTSQPTTLFFLWLLAPSTNRYFHDDAVKKLMQPSMLP---PEGVTVGLGTPLEEVDMSSWVNTSKKTPEQRNREVLAFLRGHLVGLAAEHAQVMLYNAHGGRLLYEIAKRWPSENLHAKILDEMTKMPEQRGAEQERNEDAEGDLPAWEHPKAHLILKWLLLAEAEDASANPAGDEEGEDES-HEAPSLAKAFAGQMSDELLEQYLSCNRGAFVIEALSKVASVASQVLDRVASLIETSDVVKGSLAKGN 625          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A448Z1A3_9STRA (PUM-HD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1A3_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.880e-65
Identity = 178/566 (31.45%), Postives = 272/566 (48.06%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDEL---EGHLVELSQLMYSHHIVQRLFRD-AKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPD--RRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELL-KPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTG---YLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGA 556
            ++HDASRVVQ A+QFG+  +R  +L+E+   EG L E++++ Y+H +  +  +  A+     K + K F+G   +LA H +GA VV++  ++LP+     +K EFYG  F+LF    +   +LK+ +E+     ++   +D V  +I K ++K    F +   L  EY + A P+ I+ +   + +  + LLSTR G+   A CA+YG  K+RKR  +SLKG+  +SL+HRD+Y+A++RLV+  DDT++ QK++L E+L KP E +  E+G                                                                A   LLE+  S  G KL L LL  +      Y  P E  +L+P        K                 VP+SKK+P  R+RELL ++R+ L E C  HAG+L+RS   G+ VL E      + +L  AVA+  CA  +D    +FED   H  +K L+  ++ + E                A   + AL+D+ G  L     SNRGAFV AAL +VP     V+K  GA
Sbjct:  109 LQHDASRVVQAAIQFGSDAQRKEILEEICRSEGSLGEMAKIQYAHFVSLKFIKYCARDEASVKLIVKSFKGEMPKLAVHGVGARVVESIFLNLPSKLTAPLKQEFYGPHFSLFAKDLTSAPSLKSNIENAKTETQKKSAIDFVQAIINKGMTKSFYGFTYFQQLFAEYVEVADPSEIRSISSSVADHSIHLLSTRVGTRVVAACASYGTPKDRKRSCKSLKGYTSSSLLHRDAYLALLRLVQVTDDTVSIQKSVLNEILTKPKEGNDEENG----------------------------------------------------------------AKNGLLELALSDTGSKLFLMLLVEDDESRMKYFDPYERSILEPVATIRENGKD----------------VPTSKKDPDTRRRELLKHIRDALLETCTDHAGDLLRS-LPGSRVLKEVYASAPSQKLADAVAE-TCATSMD---EVFEDPIAHRSVKSLVLCDSESDE---------------KAACVSRALVDKLGKRLPDVARSNRGAFVAAALFRVPGVKDEVKKAFGA 574          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A7S2SB37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SB37_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.180e-61
Identity = 152/477 (31.87%), Postives = 239/477 (50.10%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFRDA-KGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGD------SQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAEL-LKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPA-LLEVMTSRNGCKLLLRLLAPEHTG---YLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLD 465
            M+HDASR+VQ A+QFGN ++RL ++ EL   + ELS++ Y+H  + ++ +   +  +  K + K  +GH  +L  HA+GA VV+  L + P      +K E YG +FALF  GD      +   TL+++++ +PD++ V + ++ ++I K + K L  F +   L  EY    +P  I+ + P + +  + LLSTR+G+   A CAAY   KERKRMMRSLKG+  +SL H D+Y+A++RL++  DDT+T QK +L EL + PT   ++ S                                              VD       G  E+  D ++P + +LE+  S  G KL L LL+ +      Y  P ELE+LKP                 P      + +P+SKK  S R+ ELL Y++  L E+C  HA EL+ S+  G+ +L E      + +L +++      K  D
Sbjct:  102 MQHDASRIVQAAIQFGNEDQRLIIVKELSSSISELSKVQYAHFAILKMIKYCVRNKDAMKIIVKSLKGHINKLCVHAVGARVVELLLATFPAKITAHLKLELYGPQFALFASGDLSASTSTNNPTLQSIIKEQPDKKEVAVQNILNIINKGIEKSLFSFAYFQRLFSEYVLAVSPNEIRAIAPSISDHAIHLLSTRSGARVVAECAAYSTPKERKRMMRSLKGYTRSSLKHADAYIALLRLIDVTDDTVTAQKLLLEELQVDPTAGKVKVS----------------------------------------------VD-------GTVEDNGDNNSPKSPILEIALSDTGSKLFLMLLSKDEERRKKYFDPSELEILKPN----------------PTVLENGEQIPTSKKNASTRRVELLRYMKNLLVELCTLHADELLFSR-PGSKILREVFETFPSKELSESIIDVCKRKNTD 508          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: A0A1E7FCX4_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCX4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 5.100e-61
Identity = 180/610 (29.51%), Postives = 285/610 (46.72%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDEL---EGHLVELSQLMYSHHIVQRLFRD-AKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALFDDGDSQPRTLKAVLESRPD--RRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELL-KPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPE---HTGYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQL-----------------PMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQL 583
            ++HDASRVVQ A+QFGN ++R  +L E+   EG L E++++ Y+H    +L +  A+     K + K F+G   +LA H +GA V+++  ++LP      +K EFYG  F+LF    S   TLK+ +E+     ++   +D V  ++ K ++K    + +   L  EY     P+ I+ +   + +  + LLSTR G+   A CA+YG  K+RKR+ +SLKG+  +SL HRD+Y+A++RL++  DDT++ QK++L E+L KPT+ +  ES +                                                                  A+L+V  S  G KL L LL  +      Y  P E  +L+P     +  K +GS             VP+SKK+P  R+ ELL ++++PL E C  +  EL+ S   GA VL E      + +L +A+    C   LD                     +FE   GH  +K L+             + DE  + P  +    + L+DR G  L   VGSNRGAFV AAL +VPS    V+K   +K  +  +   +K++G+  G   L +++
Sbjct:  104 LQHDASRVVQAAIQFGNDKQRKEILTEICKSEGSLAEMAKIQYAHFCCLKLIKYCARDDASIKMIVKSFKGEMPKLAVHGVGARVLESLFLNLPPKQTAPLKQEFYGPHFSLFVKDLSGVPTLKSNIETATTETQKKSAIDFVQAILNKGMAKSFYGYTYFQQLFAEYVDVVDPSEIRMISSTIADHSIHLLSTRVGTRVVAACASYGTPKDRKRICKSLKGYTTSSLQHRDAYLALLRLIQVTDDTVSIQKSVLNEILTKPTKENDAESTMNN----------------------------------------------------------------AILDVALSDTGSKLFLMLLVKDVETRLKYFDPYERSILEPI----ATIKENGSE------------VPTSKKDPETRRNELLKHIKDPLIEACTENVRELLNS-LPGARVLKEVYASAPSEKLAEAIVD-VCVASLDDATNANAGKKKEAKEDEILYSVFESPIGHRSIKNLI-------------LCDEESTKPFVS----KLLVDRLGKRLPEIVGSNRGAFVAAALCKVPSVKDAVKKTFNSK--KKDIEAKSKSKGSTAGYAALLKEM 612          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: B7G2A9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2A9_PHATC)

HSP 1 Score: 216 bits (551), Expect = 1.140e-58
Identity = 193/607 (31.80%), Postives = 279/607 (45.96%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDEL---EGHLVELSQLMYSHHIVQRLFRDAKG-PEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALF----DDGDSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLA--PEHTG-YLHPEELELL--KPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQLP-----------MFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQL 583
            ++HDA+RVVQ A+QFG  EER  +L EL   + +  EL +  Y+H    +  +     P   K + K  +GH  RLA HA+G+ VVQ+   ++    + ++K EFYG  FALF       D+ P TL   +   P+++   +  V ++I K + K L  F +  DL  EY + A P  I+ +     +  + LLS RAG+   A   +YG AK+RKR+M+SLKG+  + L+H D+Y+A+IRLV+  DDT++  K I  ELL P++ S  E   P                                                                  LLE+  S  G KLLL LL   PE    +  P EL +L   PT+I                 G EV    +SKKEP +R++EL+ YLREPL E+CA  A EL+RS+  GALVL E         +V+A+    C   L+               +FED  GHL +K LL  ++A +            S    A +F E   DR    L+    SNRGAFV+ AL +V +    VRK   +K  ++++   A  +G   G K L  ++
Sbjct:  104 LQHDAARVVQAAIQFGTVEERRLILQELCAKQNNFAELCKSQYAHFCALKAIKYCHSDPASVKLINKALKGHMPRLAVHAVGSRVVQSIFSTMTPKQSAVLKQEFYGPHFALFALDLPRNDAVP-TLATNIAEAPEKKEATLIFVRNLINKGMEKTLYGFTYFQDLFAEYCEVADPREIRILAGTAADNSIHLLSGRAGTRVVASLISYGTAKDRKRIMKSLKGYTKSGLLHHDAYLAIIRLVQLTDDTVSIHKNIFNELLLPSDKSDEELSCP------------------------------------------------------------------LLELALSDTGSKLLLMLLVADPETLKKFFDPYELSVLFENPTVIDD---------------GQEVL---TSKKEPEIRRKELIKYLREPLIEMCAKSANELIRSR-PGALVLREVYHSYRPISVVEAIV-GTCQAALNQDSSKGDEKDVQNYRLFEDRDGHLAVKNLLLADSAKE------------SEAKLASAFFETFQDR----LMEIAQSNRGAFVITALCKVLA----VRKGAISKLNQAQLKKLADGKGATAGFKALVNEM 603          
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Match: B5YP90_THAPS (RNA-binding protein of the pumilio family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YP90_THAPS)

HSP 1 Score: 218 bits (554), Expect = 1.250e-58
Identity = 191/643 (29.70%), Postives = 288/643 (44.79%), Query Frame = 0
Query:    1 MKHDASRVVQTALQFGNREERLALLDEL-------------EGH----LVELSQLMYSHHIVQRLFRD-AKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSEFYGKEFALF-------DDGDSQPR------TLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLMKFQFAHDLLWEYFQEATPARIQE-MVPRLLEPYLVLLSTRAGSMCAAVCAAYGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILAELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQDEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLLAPEHTG---------------YLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKKEPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQLVQAVAQAACAKPLDGQ---------LPMFEDAAGHLFMKQLLKREAAAQEADPAAIGDETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARVRKVLGAKAARSKVVDGAKAEGNN----VGVKVLAEQL 583
            M+HDASR+VQ  +QFGN+ ER   + EL             +GH    L EL ++ Y+H +V ++ +  A+  +  K + K  R    +LA H++G+ VV+    + P+ +   +K E YG ++ALF        DG S+        TL + +E+ PD+    + H+  ++ K L K L  F + H LL++Y   A+P  I++ + P L E  L L+STRAG+     CAAYG  K+RK+M++  KG+  +SL+HRD+Y+A++R+V+ +DDT+   K +LAEL         ++  PK                                                              P  +L+++ S  G K+                          YL P E+E+L                  +P      + VP+SKKE   R++EL+ YL+E L + C  H  ELMRSK AG+ VL+EA     + +L  AV +  CA  ++           LP+ ED  GHL +K L   EA     D A + DE D+S       A    D+    L     +NRGAFV++AL  VPS    V+K L  K    ++   AK  GN+     G  VL E L
Sbjct:  107 MQHDASRMVQAVIQFGNKNERGETVRELCGVSGGAVQKEESKGHGTVNLAELCKIQYAHFVVLKMIKYCARDEDSVKLIVKSLRKQMTKLAVHSVGSRVVELLFATFPSKATAPLKLELYGPQYALFATSNPTPTDGKSKSSISPTLPTLASFIETNPDKLESTLTHLQTLLQKGLDKHLTGFAYFHSLLFDYVSIASPNDIRDFLTPALAEHSLHLISTRAGTKVVCECAAYGSVKDRKKMLKCFKGYTRSSLLHRDAYLAILRMVDVMDDTVLVNKMLLAEL--------HQNSDPKAXXXXXXXXXXXX------------------------------------------------XPSPILDLVLSDTGSKMFXXXXXXXXXXXXXXXXXXXXSKWQKYLDPYEIEVL----------------HRNPTVTDNGESVPTSKKEDETRRQELVVYLKELLVDACVKHTEELMRSK-AGSKVLIEACESFPSEELYNAVLE-VCADSMENDSMDEEGGKALPILEDPVGHLTLKHLFLAEA---RNDSAGV-DEDDTS------LARMFYDKFQSNLGDIASTNRGAFVLSALIAVPSVKEDVKKTL--KGHTKEITQQAKKGGNDGKKLAGCSVLLEAL 663          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.19.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7W3_9PHAE6.160e-24161.06PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FHP3_ECTSI5.630e-21257.89PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7T9_9STRA3.150e-14245.64Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S2FGZ7_9STRA2.710e-7334.78Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9U7V4_9STRA2.990e-6832.54Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A448Z1A3_9STRA2.880e-6531.45PUM-HD domain-containing protein n=1 Tax=Pseudo-ni... [more]
A0A7S2SB37_9STRA2.180e-6131.87Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A1E7FCX4_9STRA5.100e-6129.51ARM repeat-containing protein n=1 Tax=Fragilariops... [more]
B7G2A9_PHATC1.140e-5831.80Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B5YP90_THAPS1.250e-5829.70RNA-binding protein of the pumilio family n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 6..28
e-value: 0.065
score: 13.0
coord: 31..61
e-value: 0.26
score: 11.0
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 27..63
score: 8.033962
IPR012959CPL domainPFAMPF08144CPLcoord: 397..488
e-value: 8.2E-9
score: 36.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..270
e-value: 1.8E-24
score: 88.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..326
NoneNo IPR availablePANTHERPTHR13389:SF0PUMILIO HOMOLOG 3coord: 2..583
IPR040059Pumilio homologue 3PANTHERPTHR13389UNCHARACTERIZEDcoord: 2..583
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..353
score: 16.207191
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..358

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:293777..302255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.19.2mRNA_A-nodosum_M_contig96.19.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 293337..303814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.19.2 ID=prot_A-nodosum_M_contig96.19.2|Name=mRNA_A-nodosum_M_contig96.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=615bp
MKHDASRVVQTALQFGNREERLALLDELEGHLVELSQLMYSHHIVQRLFR
DAKGPEEQKRLAKVFRGHGVRLATHAIGAEVVQTALISLPTASAGLIKSE
FYGKEFALFDDGDSQPRTLKAVLESRPDRRAVVMDHVHDVIGKLLSKGLM
KFQFAHDLLWEYFQEATPARIQEMVPRLLEPYLVLLSTRAGSMCAAVCAA
YGGAKERKRMMRSLKGHVVASLIHRDSYVAVIRLVESVDDTITCQKTILA
ELLKPTEVSIRESGVPKVGKGTSAEEWVPKGTTAPRGGRPEGGVSKAELQ
DEDGVTGMDVDESPAEGGGREEEKVDESAPPALLEVMTSRNGCKLLLRLL
APEHTGYLHPEELELLKPTMIPASAPKTSGSSEASPAAGTEVKLVPSSKK
EPSVRQRELLAYLREPLREVCASHAGELMRSKFAGALVLLEAIRGIGTPQ
LVQAVAQAACAKPLDGQLPMFEDAAGHLFMKQLLKREAAAQEADPAAIGD
ETDSSPLTAPSFAEALLDRAGGELVSWVGSNRGAFVVAALEQVPSASARV
RKVLGAKAARSKVVDGAKAEGNNVGVKVLAEQLGYGDFGAKAAKAASDVA
EASTAKNSGQKKKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR012959CPL_dom
IPR011989ARM-like
IPR040059PUM3
IPR033133PUM-HD
IPR016024ARM-type_fold