mRNA_A-nodosum_M_contig9559.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: D8LNM3_ECTSI (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM3_ECTSI) HSP 1 Score: 228 bits (582), Expect = 2.710e-68 Identity = 126/138 (91.30%), Postives = 131/138 (94.93%), Query Frame = 2
Query: 416 SSSVGKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSKAA 829
S S+G VAV+SAGTSDLAVAEEAA+LAELAGAEV R HDVGVAGIHRLLG IP V++AGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSK A
Sbjct: 187 SISIGTVAVLSAGTSDLAVAEEAAVLAELAGAEVSRFHDVGVAGIHRLLGAIPSVQKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSKVA 324
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A835ZD94_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD94_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.090e-52 Identity = 100/138 (72.46%), Postives = 115/138 (83.33%), Query Frame = 2
Query: 416 SSSVGKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSKAA 829
+ S+G VAVM AGTSD+A+AEE A+L EL GA V R++DVGVAGIHRL +P V A A+C+AGMDGAMP VVAGLV+CPVVAVPTSVGYGAA G+APLLTMLNACAPGV+VVNIDNGFGAAA AVK+L+ AA
Sbjct: 128 AGSLGTVAVMCAGTSDVAIAEETAVLLELCGAAVERVYDVGVAGIHRLFAALPRVRAAHCAVCIAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAPLLTMLNACAPGVAVVNIDNGFGAAAMAVKILRMRHAA 265
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A7S2C1V7_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1V7_9STRA) HSP 1 Score: 171 bits (434), Expect = 5.840e-49 Identity = 92/126 (73.02%), Postives = 106/126 (84.13%), Query Frame = 2
Query: 437 AVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLK 814
AV+ AGTSDL VAEEAA+ ELAG V RL+DVGVAG+HRLL IP+V +A V ICVAGMDGA+P VV GL +CPV+A PTSVGYGAA +G+APLLTMLNACAPGVSVVNIDNGFGAA A+K+ +
Sbjct: 1 AVLCAGTSDLPVAEEAAITLELAGVPVERLYDVGVAGLHRLLQQIPVVRKAKVVICVAGMDGALPSVVGGLARCPVIACPTSVGYGAAFNGVAPLLTMLNACAPGVSVVNIDNGFGAATCALKIAE 126
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A522MJZ8_9BACT (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522MJZ8_9BACT) HSP 1 Score: 170 bits (431), Expect = 6.870e-47 Identity = 98/156 (62.82%), Postives = 115/156 (73.72%), Query Frame = 2
Query: 356 SVVHPHSRKGRRRRLHLEDFSSSVGKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSK 823
+V HP + R + L G VAV+ AGTSDL VAEEAA+ AE GA V R+HDVGVAG+HRLLG + + +AGV I VAGM+GA+P VVAGLV PVVAVPTSVGYGAA GLAPLL MLNACAPGV VVNIDNGFGAA A ++L+ ++
Sbjct: 98 AVHHPDA-----RMVVLPGAEHVEGTVAVICAGTSDLPVAEEAAVTAEALGAAVTRVHDVGVAGLHRLLGHLQELRRAGVVIAVAGMEGALPAVVAGLVPAPVVAVPTSVGYGAAFGGLAPLLAMLNACAPGVGVVNIDNGFGAAVLAARILRRAR 248
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A7S3Y4Y2_HETAK (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4Y2_HETAK) HSP 1 Score: 167 bits (423), Expect = 6.910e-47 Identity = 89/131 (67.94%), Postives = 110/131 (83.97%), Query Frame = 2
Query: 422 SVGKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLK 814
++G+VA ++AGTSDL V EEAA++ EL GA+V R++DVGVAGIHRLL I ++ QA V + VAGMDGAMP VVAGLV P VAVPTS+GYGAA G+APLL MLN+C+PG+SVVNIDNGFGAA FA+K+L+
Sbjct: 13 ALGRVACVAAGTSDLPVVEEAAVVLELCGAQVDRVYDVGVAGIHRLLAHIDLIRQAEVVVAVAGMDGAMPSVVAGLVPAPTVAVPTSIGYGAAFGGVAPLLGMLNSCSPGLSVVNIDNGFGAAVFALKVLR 143
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A257UEP3_9BACT (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A257UEP3_9BACT) HSP 1 Score: 166 bits (420), Expect = 2.880e-45 Identity = 92/132 (69.70%), Postives = 104/132 (78.79%), Query Frame = 2
Query: 428 GKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSK 823
G VAV+ AGTSDL VAEEAA+ E GA V R+HDVGVAG+HRLLG + + QA V I VAGM+GA+P VVAGLV PVVAVPTSVGYGAA GLA LL MLNACAPGV VVNIDNGFGAA AV++L+ +
Sbjct: 117 GTVAVVCAGTSDLPVAEEAAITVEALGAAVTRVHDVGVAGLHRLLGHLKTLRQADVVIAVAGMEGALPAVVAGLVPAPVVAVPTSVGYGAAFGGLAALLAMLNACAPGVGVVNIDNGFGAAVLAVRILRRGR 248
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A4D9D972_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D972_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.390e-44 Identity = 99/168 (58.93%), Postives = 118/168 (70.24%), Query Frame = 2
Query: 338 KPGWWLSVVHPHSRK----GRRRRLHLEDFSSSVGKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVI--PIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSK 823
KP L ++ PH RK G RR S+G + VM AGT+D++VAEEA +LAEL G EV R +DVGVAGIHRL + V ++ V +CVAGMDGA+P VVAGL+ CPVVAVPTSVGYG GLAPLLTMLNACAPGV+ VNIDNG GAA VK+L+ +K
Sbjct: 199 KPVPRLLILRPHGRKEGKGGFERRK-----PPSIGLITVMCAGTADVSVAEEAGVLAELCGVEVERAYDVGVAGIHRLFDALGQERVRRSQVVVCVAGMDGALPTVVAGLLPCPVVAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGVGAAGMVVKILRGAK 361
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A6G9SEM8_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6G9SEM8_9CYAN) HSP 1 Score: 164 bits (414), Expect = 2.750e-44 Identity = 86/132 (65.15%), Postives = 108/132 (81.82%), Query Frame = 2
Query: 428 GKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSK 823
G + ++SAGT+DL +AEEAA+ AELAG V+RL DVGVAGIHRLL ++E A V I VAGM+GA+P VVAGL CPV+AVPTS+GYGA+ GLAPLLTMLN+CAPG+ VVNIDNGFGAA A ++L++++
Sbjct: 122 GVIGILSAGTADLPIAEEAAVTAELAGFRVLRLWDVGVAGIHRLLSNRHLIESASVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGIGVVNIDNGFGAAVLAGQILRTAQ 253
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A6A3L485_9STRA (Phosphoribosylaminoimidazole carboxylase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L485_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.290e-44 Identity = 91/138 (65.94%), Postives = 104/138 (75.36%), Query Frame = 2
Query: 401 HLEDFSSSVGKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLK 814
H ED V+ AGTSDL VAEEAA+ ELA +V RL+DVGVAGIHRLL ++ + VAICVAGMDGA+PGVV GL PV+AVPTSVGYGAA GLAPLLTMLNAC+PGV VVNIDNGFGAA A ++L+
Sbjct: 174 HREDMEKETPTACVLCAGTSDLPVAEEAAVTLELADYKVTRLYDVGVAGIHRLLRNQHVLRASDVAICVAGMDGALPGVVGGLTPSPVIAVPTSVGYGAAFGGLAPLLTMLNACSPGVGVVNIDNGFGAAVLAARILR 311
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: UPI0019E70B0C (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Geminocystis sp. M7585_C2015_104 TaxID=2774334 RepID=UPI0019E70B0C) HSP 1 Score: 163 bits (413), Expect = 3.550e-44 Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = 2
Query: 428 GKVAVMSAGTSDLAVAEEAALLAELAGAEVVRLHDVGVAGIHRLLGVIPIVEQAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLK 814
G + +++AGT+DL VAEEAA+ A+L G EV+RL DVGVAGIHRLL ++ QA V I VAGM+GA+P VVAGLV CPV+A PTS+GYGA SGLAPLLTMLN+CAPGV+VVNIDNGFGAA A K+L+
Sbjct: 119 GTIGILTAGTADLPVAEEAAVTAQLCGFEVIRLWDVGVAGIHRLLFHRRLLSQADVLIVVAGMEGALPSVVAGLVDCPVIATPTSIGYGAHFSGLAPLLTMLNSCAPGVAVVNIDNGFGAAILAAKILR 247 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9559.1.1 >prot_A-nodosum_M_contig9559.1.1 ID=prot_A-nodosum_M_contig9559.1.1|Name=mRNA_A-nodosum_M_contig9559.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=194bp DLQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRback to top mRNA from alignment at A-nodosum_M_contig9559:8081..9951+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9559.1.1 ID=mRNA_A-nodosum_M_contig9559.1.1|Name=mRNA_A-nodosum_M_contig9559.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1871bp|location=Sequence derived from alignment at A-nodosum_M_contig9559:8081..9951+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9559:8081..9951+ >mRNA_A-nodosum_M_contig9559.1.1 ID=mRNA_A-nodosum_M_contig9559.1.1|Name=mRNA_A-nodosum_M_contig9559.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=582bp|location=Sequence derived from alignment at A-nodosum_M_contig9559:8081..9951+ (Ascophyllum nodosum dioecious)back to top |