prot_A-nodosum_M_contig9559.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9559.1.1
Unique Nameprot_A-nodosum_M_contig9559.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length194
Homology
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: D8LNM3_ECTSI (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM3_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 3.500e-38
Identity = 87/151 (57.62%), Postives = 99/151 (65.56%), Query Frame = 0
Query:    1 DLQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGS---------------------------SPIVATRVSAEKWADISVELQG-LRYHAEARVVAFGGPP 123
            DL ALL RVAAG+L  + AASQL+PLLV+GGAQAE+VGGFAKIDH RR RVGFPEVVFG+GKSA QI DIL AMI+E  A    +                           SP+VATRVS EKW  IS  L G L YHA+AR+V+FG PP
Sbjct:   19 DLPALLARVAAGDLSPATAASQLAPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSAEQITDILAAMIREARAGSRVAAEAAAVHXXXXXXXXXXXXXXXXXXXXSPVVATRVSPEKWLVISDALPGQLTYHADARIVSFGEPP 169          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A3B8JU33_9CYAN (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase (Fragment) n=1 Tax=Cyanobacteria bacterium UBA8553 TaxID=2055771 RepID=A0A3B8JU33_9CYAN)

HSP 1 Score: 81.3 bits (199), Expect = 2.860e-16
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 0
Query:    2 LQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIVATRVSAEKWADISVELQGLRYHAEARVVAF 119
            LQ+LL  VAAGE+  +VA  +L  L        E VG FA+IDH RRLR GFPEV++G GK+  QI  I+  M     A+     PI+ATR+  + +A +  ++ G++Y+  AR+ A 
Sbjct:    5 LQSLLEAVAAGEVKPAVALEKLKHLAY------ETVGDFARIDHHRRLRSGFPEVIWGPGKTPDQIAQIMEVM---RDAAAPDIVPIMATRIEPDVFAKLQEKVPGIQYYPTARICAI 113          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A6P2AI96_9CHRO (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Gloeocapsa sp. DLM2.Bin57 TaxID=2480214 RepID=A0A6P2AI96_9CHRO)

HSP 1 Score: 82.8 bits (203), Expect = 7.930e-16
Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 0
Query:    2 LQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIV-ATRVSAEKWADISVELQGLRYHAEARVVAFG 120
            ++ LL  VA GE+    A +QL  L        E VG FAKIDH R+LR GFPEV++GEGK+  Q++ I+  MI+         SP+V ATR+ +     +  E++GLRY+ +AR+ A G
Sbjct:    7 IETLLKAVARGEVSPDQAFAQLKNL------SFETVGDFAKIDHHRQLRTGFPEVIWGEGKTLEQLIAIIHNMIRR--------SPLVMATRIDSTVAEQLQAEVEGLRYYPQARICALG 112          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: UPI001482DFB4 (nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI001482DFB4)

HSP 1 Score: 82.4 bits (202), Expect = 1.230e-15
Identity = 56/125 (44.80%), Postives = 70/125 (56.00%), Query Frame = 0
Query:   13 ELPSSVAASQLSPLLVAGGAQA-------EEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIV-ATRVSAEKWADISVELQGLRYHAEARVVAFGGPPPLAERP 129
            EL  +VAA +LSP       QA       EEVGGFAKIDHQR +R GFPEV++G+ K+A QI++I+ AM   H        P+V ATRV A K AD+   L    Y   AR+ A      LA +P
Sbjct:    9 ELFQAVAAGRLSPEAAIDKLQASEKVSGYEEVGGFAKIDHQRTIRTGFPEVIWGQDKTAGQIIEIMLAMEPLH--------PVVMATRVDAHKGADVQSALSQATYFDTARICAIRPQASLAVQP 125          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A3C0N4P5_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A3C0N4P5_9CYAN)

HSP 1 Score: 82.0 bits (201), Expect = 1.840e-15
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 0
Query:    2 LQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIVATRVSAEKWADISVELQGLRYHAEARVVAF 119
            LQ+LL  VAAGE+  +VA  +L  L        E VG FA+IDH RRLR GFPEV++G GK+  QI  I+  M     A+     PI+ATR+  + +A +  ++ G++Y+  AR+ A 
Sbjct:    7 LQSLLEAVAAGEVKPAVALEKLKHLAY------ETVGDFARIDHHRRLRTGFPEVIWGPGKTPDQIAQIMEVM---RDAAAPDIVPIMATRIEPDVFAKLQEKVPGIQYYPTARICAI 115          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A0D8ZKY4_9CYAN (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase n=2 Tax=Aliterella TaxID=1827277 RepID=A0A0D8ZKY4_9CYAN)

HSP 1 Score: 81.3 bits (199), Expect = 3.210e-15
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 DLQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIVATRVSAEKWADISVELQGLRYHAEARVVAF 119
            +LQ LL  VAAGE+  +VA  +L           E VG FA+IDH R+LR GFPEV++G+ K+  QI  I+TAM +        SS ++ATR+ +  +A +  ++ GL Y+  AR+ A 
Sbjct:    7 NLQNLLESVAAGEINPAVALEKLKHFAY------EPVGDFARIDHHRKLRTGFPEVIWGQDKTPDQIAQIMTAMRQR-------SSVVMATRIESTVYAQLETKVAGLAYYPSARICAI 112          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A6H1U2A2_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1U2A2_9CYAN)

HSP 1 Score: 80.9 bits (198), Expect = 4.400e-15
Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 0
Query:    2 LQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIV-ATRVSAEKWADISVELQGLRYHAEARVVAFGGP 122
            LQ+LL  VA+G LP   A  +L  L        E VGGFA IDH R LR GFPEV++G GK+  QI +I+  M + +        P+V ATR++ E +  +   ++GL Y+ EAR+   G P
Sbjct:    6 LQSLLEAVASGNLPPEKALEELKHLAF------EPVGGFAHIDHHRNLRTGFPEVIWGPGKTPDQIAEIMEVMRQRN--------PVVMATRIAPEVYDQLQERVKGLFYYREARICTLGLP 113          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A329M362_9BACL (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Paenibacillus contaminans TaxID=450362 RepID=A0A329M362_9BACL)

HSP 1 Score: 79.7 bits (195), Expect = 1.180e-14
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    1 DLQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIVATRVSAEKWADISVELQGLRYHAEARVVAF 119
            DL+ LL +V +GEL    A   + PLL +G A      GFA++D +R  R GFPEV+FGEGK+  QI  I  A + EH+        ++ATRV A+K   +  +L G+ YHA AR + +
Sbjct:    3 DLEQLLQKVQSGELQIDEAKKHMQPLLSSGIADL----GFAQVDTEREKRTGFPEVIFGEGKTTEQITAIF-AKLMEHA------DRVLATRVDADKAEKVIAQLSGVTYHATARALTW 110          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: K9VM32_9CYAN (1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=13 Tax=Cyanobacteria TaxID=1117 RepID=K9VM32_9CYAN)

HSP 1 Score: 79.7 bits (195), Expect = 1.540e-14
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 0
Query:    2 LQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIVATRVSAEKWADISVELQGLRYHAEARVVAFGGPPPLAERPPT 131
            LQ LL  VAAG++    A  +L           E+VG FAKIDH R LR GFPEV++G GK+  QIV+I+ AM   +SA       ++ATR+  E +  +  ++  L Y+ +AR+ A     P  + P T
Sbjct:    6 LQKLLESVAAGDISPIAALDKLKHF------DFEQVGDFAKIDHHRTLRTGFPEVIWGPGKTPDQIVEIIEAMRGRNSA-------VMATRIEPEVFEQLQQKIPDLCYYQKARICAISANSPTPQHPGT 122          
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Match: A0A831TTC1_9BACL (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Paenibacillaceae bacterium TaxID=2003592 RepID=A0A831TTC1_9BACL)

HSP 1 Score: 79.3 bits (194), Expect = 1.600e-14
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 DLQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLRVGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIVATRVSAEKWADISVELQGLRYHAEARVVAF 119
            +L+ +L +V  GEL    A+ Q++ + VAGG  A+   GFA++D  R  R GFPEV+FGE K+A  I  I+  M K +         ++ATRV A+K A I + +  L YHAEAR + +
Sbjct:    2 NLEYILQKVKLGELEPMEASKQINNIYVAGGRVADL--GFAQLDLDREARTGFPEVIFGESKTAEHITSIILEMRKTN-------DRVIATRVDADKAAQIMLTIPDLTYHAEARALLW 111          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9559.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM3_ECTSI3.500e-3857.62Phosphoribosylaminoimidazole carboxylase n=2 Tax=E... [more]
A0A3B8JU33_9CYAN2.860e-1641.531-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyla... [more]
A0A6P2AI96_9CHRO7.930e-1641.67Nickel pincer cofactor biosynthesis protein LarB n... [more]
UPI001482DFB41.230e-1544.80nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A3C0N4P5_9CYAN1.840e-1541.53Nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A0D8ZKY4_9CYAN3.210e-1540.341-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyla... [more]
A0A6H1U2A2_9CYAN4.400e-1540.98Nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A329M362_9BACL1.180e-1441.18Nickel pincer cofactor biosynthesis protein LarB n... [more]
K9VM32_9CYAN1.540e-1438.461-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyla... [more]
A0A831TTC1_9BACL1.600e-1440.34Nickel pincer cofactor biosynthesis protein LarB n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039476Pyridinium-3,5-biscarboxylic acid mononucleotide synthasePANTHERPTHR43064PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE-RELATEDcoord: 2..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9559contigA-nodosum_M_contig9559:8081..9298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9559.1.1mRNA_A-nodosum_M_contig9559.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9559 8081..9951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9559.1.1 ID=prot_A-nodosum_M_contig9559.1.1|Name=mRNA_A-nodosum_M_contig9559.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=194bp
DLQALLNRVAAGELPSSVAASQLSPLLVAGGAQAEEVGGFAKIDHQRRLR
VGFPEVVFGEGKSASQIVDILTAMIKEHSASGAGSSPIVATRVSAEKWAD
ISVELQGLRYHAEARVVAFGGPPPLAERPPTPSTSRGFQQQCREGCSDEC
RHFRSCCGGGGGLIGRAGRGGGGETPRRGRCWHSPAIGGHPYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039476P2CMN_synthase_LarB