mRNA_A-nodosum_M_contig953.24.2 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A6H5KYI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI7_9PHAE) HSP 1 Score: 640 bits (1652), Expect = 6.320e-199 Identity = 464/1008 (46.03%), Postives = 579/1008 (57.44%), Query Frame = 3
Query: 48 KQSRNTSFSR-DAYALLRGFQAAMAVTDN-LGREAEGRSGAFTCPMQNDMNAFQQGVGRAFGARSALAEAVQIMDEA--RKGKGGMNARGRDEQGQWRDGIKAGLDSGKSPETLSD---DEGGCDRSLTREWVTNAVGLGPEDWISIQRLLGGCLFEQKWIDLTCGELCEQMVVTCLPHGKLLQEIRRRSASVFNSLHGLYSDLLWVLDRCVASLLRGRIERDKAEEKWIRKLANTRTDHEARTKAIQESREFEQEEQARAKSEAKFQVVRMGDTLRTLNGIFKTMQEDWKTMAE*T*KI-VQSPGRRSCHGRKRQKSFRAQEETPPK*RQRCRC*RRSSRTQSCGRPG*KRKWSNTNRSYRSSWITRPGA*SRSKPKKAGTDTVVEGSEDGSVDGESKK-------------KNAKIVRRTPVTSGSSLVRARTAAKEVGGXXXXXXXXXXXXXKDTK-RK*IIC-----PLHQVP*GS*RPWQHRRCAGEGEAAQGRGAPAVSRLPPASAQLEGVQAPTHGSVGSDGNASRLTGK--DLGRQRFEVQARPAGPLPRVRLFLV-RAIQG*HGHRQRHRKVEACGAGKRRPVGAVLRRQGTGARER*SDNLLARPKMKPTERTT*HSLCTVSSVIEELPGGFCENDGESKSDTCTDLHTLKRKVGEARGLTQECSRSEG--------GDRDRADSKAKVDAVANEVLSSGRDVVWLLSNDAVEAVNHVLVKALEDQKWKVLEATKAISVSCEV-VSRPGPFSTCVDLFLFLRIMLHSFKEEQVNRRAAVRLMFETATTGVLTDDTPIYGDSVLDQNTPSVAETTYSSLLRERKVIVDLPQFMVITRTLWPEVTTSDAVTLFRDAHEETNGEVDYETFLRLADRWQFFSNALQLPVHMPSRSDVGRPGLDVATKGNLGALVHRHYNLMQPAVENVKETLPESAVKQLVKCQRGLERELADVRVSVSQRVSDDHPFHRSGQTLSAGRSRS-IIQPQEASSSSMSIDGTRP 2951
K R T SR DA +L+R F+AAMAV DN +G AEGR GAF PMQNDM+ QQ V R F AR A+ EAV+I+D G+ G +QG+W+D G + S T+ D D GG LT EWV AVG+GP+DW + +R+LG CLFEQKW+DLTCGEL +Q+ V CLPHG+LLQE+R+R+AS FN LHGLYSD LW LDRCVAS+L GR ER +AEE W +KL T D+EA+ KAI +SR FE++EQARAK EAK V RMGDTLRTLNGIFKTMQ D K M E K +S + R+ + R +E + + K + + + + KAGTD VV G ED DGE ++ KN R SGS XXXXXXXXXXXXX + ++C L + + + R+ G+ Q G + LP L+G + P + + L K D R++ R P F RA+ R + V + V + ARE L + L +++E G D S TCTDLHTL+R+V EA+ + + + G G R D + V E ++SG DVVWL S+DAVE V+ +LVKALEDQK +VL+ATKAISVSCE ++ P STCVDLFLFLRI+LHSFKEEQVNRRAAVRLMFETA+TGVLTD TPIYGD +DQ+ + AET Y+SLL E K +VDLPQFMVI RTLWPEVTTSD V +FRDAHE+TNGEVDY+ FL+ ADRWQFFSNALQLPVHMPSR+D+G +D AT+ NLGALVHRHYNLM+PA++ VK+T+PESAVKQLVKCQR +EREL D +V+Q S +S Q S ++P A S++ S+DGTRP
Sbjct: 192 KSVRETPVSRGDASSLVREFEAAMAVMDNHVGGRAEGRHGAFMSPMQNDMHGLQQEVSRTFDARQAVVEAVEIVDRCVGSAGRAGGGXXXGSQQGRWQD---TGGGNPLSESTIEDSVQDLGGPSLDLTGEWVKRAVGIGPDDWAAAKRILGSCLFEQKWLDLTCGELADQVTVMCLPHGRLLQELRQRNASTFNRLHGLYSDCLWTLDRCVASVLEGRRERKQAEEDWTKKLEKTCADYEAKIKAIHDSRGFEEQEQARAKREAKAHVDRMGDTLRTLNGIFKTMQADGKAMTEVDLKDRCRSLEQELASRREEMQELRRLKEKHLETEAEMEQVKLXXXXXXXXXXXIKEEMERRQSLVKELMDNEAKRLTEIETLKAGTDRVVGGDED---DGEGEEREGDHPKGEKASIKNRNKRRHKETNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVGSSVLCIKCRKALDDLSNIADALEKERQLKGQ-TRLQCHGYRLL--LP----NLKGYRPPRTVAWVRTVMRAILRAKIWDDSVLRYKQDLRVRFPEFTYAWFEPPRAVMAAANANVRSKLVAQADDDRWGLYYGVK----SLARESAEATLFWHALNESNGEDYLTFLVYCLAIVEGTAGSMLR-DQWGVSATCTDLHTLQRQVQEAQAVVERSASKAGSAIGTGAGGVTLRGDGRGDVKEQL-EPMASGTDVVWLRSSDAVETVDRILVKALEDQKRRVLDATKAISVSCEGRLTDQDPSSTCVDLFLFLRILLHSFKEEQVNRRAAVRLMFETASTGVLTDGTPIYGDGRVDQSALAAAETVYNSLLNETKAVVDLPQFMVIARTLWPEVTTSDVVAVFRDAHEDTNGEVDYQAFLKFADRWQFFSNALQLPVHMPSRADLGEE-MDAATRSNLGALVHRHYNLMKPAMDTVKQTMPESAVKQLVKCQRAVERELNDA-YTVTQDSSTGSQSSKSRQRESGSSGEDGALEPTPALSTT-SMDGTRP 1177
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: D7FIZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ8_ECTSI) HSP 1 Score: 632 bits (1631), Expect = 2.290e-191 Identity = 452/1003 (45.06%), Postives = 567/1003 (56.53%), Query Frame = 3
Query: 48 KQSRNTSFSR-DAYALLRGFQAAMAVTDN-LGREAEGRSGAFTCPMQNDMNAFQQGVGRAFGARSALAEAVQIMDEA--RKGKGGMNARGRDEQGQWRDGIKAGLDSGKSPETLSDDEGGCDRSLTREWVTNAVGLGPEDWISIQRLLGGCLFEQKWIDLTCGELCEQMVVTCLPHGKLLQEIRRRSASVFNSLHGLYSDLLWVLDRCVASLLRGRIERDKAEEKWIRKLANTRTDHEARTKAIQESREFEQEEQARAKSEAKFQVVRMGDTLRTLNGIFKTMQEDWKTMAE*T*KI-VQSPGRRSCHGRKRQKSFRAQEETPPK*RQRCRC*RRSSRTQSCGRPG*KRKWSNTNRSYRSSWITRPGA*SRSKPKKAGTDTVVEGSEDGSVDGESKKKNAKIVR--RTPVTSGSSLVRARTAAKEVGGXXXXXXXXXXXXXKDTKRK*IICPLHQVP*GS*RPWQHRRCAGE-----GEAAQGRGAPAVSRLPPASAQLEGVQAPTHGSVGSDGNASRLTGKDLGRQRFEVQARPAGPLPRVRLFLVRAIQG*HGHRQRHRKV-EACGAGKRRPVGAVLRRQGTG--------ARER*SDNLLARPKMKPTERTT*HSLCTVSSVIEELPGGFCENDGESKSDTCTDLHTLKRKVGEARGLTQECSRSEGG------------DRDRADSKAKVDAVANEVLSSGRDVVWLLSNDAVEAVNHVLVKALEDQKWKVLEATKAISVSCEV-VSRPGPFSTCVDLFLFLRIMLHSFKEEQVNRRAAVRLMFETATTGVLTDDTPIYGDSVLDQNTPSVAETTYSSLLRERKVIVDLPQFMVITRTLWPEVTTSDAVTLFRDAHEETNGEVDYETFLRLADRWQFFSNALQLPVHMPSRSDVGRPGLDVATKGNLGALVHRHYNLMQPAVENVKETLPESAVKQLVKCQRGLERELADV-RVSVSQRVSDDHPFHRSGQTLSAGRSRSIIQPQEASSSSMSIDGTRP 2951
K R T SR DA +L+R F+AAMAV DN +G AEG GAF PMQND++ QQ V R F AR A+ EAV+I+D G+ G +QG+W+D S E D GG LT WV AVG+GP+DW + +R+LG CLFEQKW+DLTCGEL +Q+ V CLPHG+LLQE+RRR+AS FN LHGLYSD LW LDRCVAS+L GR ER +AEE W +KL T D+EA+ KAI +SR FE++EQARAK EAK V RMGDTLRTLNGIFKTMQ D K M E K +S + R+ + R +E + + K + + + + KAGTD V G ED DGE ++ R + V + + T XXXXXXXXXXXXX Q S + R+ + + R +RL Q G + G + + + R + L + VR + + + R V A A R + A G ARE L + L +++E G D S TCTDLHTL+R+V EA+ + + + G DR D K ++ E ++SG DVVWL S+DA E V+H+LVKALEDQK +VL+AT+AISVSCE ++ P STCVDLFLFLRI+LHSFKEEQVNRRAAVRLMFETA+TGVLTD TPIYGD +DQ+ + AET Y+SLL E K +VDLPQFMVI RTLWPEVTTSDAV +FRDAHE+TNGEVDY+ FL+LADRWQFFSNALQLPVHMPSR+D+G +D AT+ NLGALVHRHYNLM+PA++ VK+T+PESAVKQLVKCQR +EREL D V+ R ++ S+G ++P A S++ S+DGTRP
Sbjct: 193 KSVRETPVSRGDASSLVREFEAAMAVMDNHVGGRAEGHDGAFMSPMQNDIHGLQQEVSRTFDAREAVVEAVEIVDRCVGSAGRAGGXXXXXXQQGRWQDTGGGNPLSEPIVEDSVQDLGGSPLDLTGHWVKRAVGIGPDDWAAAKRILGSCLFEQKWLDLTCGELADQVTVMCLPHGQLLQELRRRNASAFNRLHGLYSDCLWTLDRCVASVLEGRRERKQAEEDWTKKLEKTCADYEAKIKAIHDSRGFEEQEQARAKREAKAHVDRMGDTLRTLNGIFKTMQADGKAMTEVDLKDRCRSLEQELASRREEMQELRRLKEKHLETEAEMEQVKLXXXXXXXXXXXIKEEMERRQSLVKELMDNEAKRLTEIETLKAGTDRVGGGDED---DGEGDEREGDHPRDEKASVKNRNKRRHKETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEVGSSVLCIKCRKALDDLSNIADALEKERQLKGQTRL-----QCHGYRLLLPNLKGYRPPRTVAWVRTVMRAILRAKIWDDSVLRYKQDLRVRFPEFTYAWFEPPRAVMAAANANVRSKLVAQADDDRWGLYYGVKSLARESAEATLFWHALNESNGEDYLTFLVYCLAIVEGTAGSMLR-DQWGVSATCTDLHTLQRQVQEAQAVKERSASKVGSAIGTGAGSVTLRGADRGDEKEQL-----EPMASGTDVVWLRSSDARETVDHILVKALEDQKRRVLDATRAISVSCEGRLTDQDPSSTCVDLFLFLRILLHSFKEEQVNRRAAVRLMFETASTGVLTDGTPIYGDGRVDQSALAAAETVYNSLLNESKAVVDLPQFMVIARTLWPEVTTSDAVAVFRDAHEDTNGEVDYQAFLKLADRWQFFSNALQLPVHMPSRADLGEE-MDAATRSNLGALVHRHYNLMKPAMDTVKQTMPESAVKQLVKCQRAVERELNDAYTVTQDSSTGSQSSKSRKRESGSSGED-GALEPTPALSTT-SMDGTRP 1178
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A6H5LD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD55_9PHAE) HSP 1 Score: 311 bits (798), Expect = 1.280e-90 Identity = 184/429 (42.89%), Postives = 256/429 (59.67%), Query Frame = 1
Query: 3787 SSGCGAAPDDQGEGYKLAGLNLSTIIDDGPKAIDELFPVSYQDPKTGRQHWHERVEVVEAVAKELFDRCSQPPPIAK-----------TGSDAAALMRAPVSEVQTSFRRLLGHPALSGGKCGLIDVDEVLWLFMRHWLVVRQHRRDLVDHALGLMEALPPTTPGSPS-----ETLRPSPLVSVDAFRAGVAQFEELSRSTPPRQVSELIYSDAYMMALGSTRQRGNEALSHAEIIKTAILSSPLLLWDVSGARQEQVIPPNFSLRAMRSWLLFAWSSYASALQTQLPLLARELQGLMDSDDAPVGNDSPQAGVGLAKAE------PKRTSAVAQTGQFSFWLGDDNERKHLARVLEHAQTEIDRLDKIMKELHIFHEDSICYRRSGSIGGEVGDVGEVPKKQQQTPAREMQKSYSR-STIERISSELR 5004
++G G A D GEG L GL+++ ++ DGPK I ELFPV+ QDP+TGRQ+WHE V EAVAKELFD+CSQPPP+ K A RA VS VQ S +L+GHPA++GG+ +DVD+ LWLFMRHW VVRQHR LVD ALG + P + + + + + PSPLVSVD FR + E +SRS PPR V++L+Y DA+M+A +R+ N+A+SH E KTA+LSSP+LLWD SGAR+EQ +PP FS RAMRSWLL +W+ Y+ ++ ++ ++ ELQ + D+ A P AGV A A+ P T A+ S + E L R LE ++E +L FH++ + + ++ + E ++Q+QT + E+ K SR +ER+S E+R
Sbjct: 3 TTGSGIAGSDAGEGSALGGLDVTAMMGDGPKPIKELFPVTLQDPRTGRQYWHESPAVTEAVAKELFDKCSQPPPVEKGPGXXXXXXXXXXXXXXAPARARVSGVQMSLGKLMGHPAITGGREKRVDVDDALWLFMRHWSVVRQHRISLVDRALGQVAPAPSSAASAAAGNDAAQAVSPSPLVSVDGFRVVTTRLENMSRSAPPRGVADLVYVDAFMVASSLSRRPENKAMSHRESTKTALLSSPVLLWDASGARREQQMPPTFSNRAMRSWLLSSWARYSDPIKAEVLVMLEELQYVSDTTPADGITQEP-AGVENAAADLPAGGAPAHTPTGARGSGGSAARPANVEAAKLVRALEKIRSE---------DLDTFHKEGSMAQSTAAVIPKEASA-EQQEQQEQTLSPEIVKKLSRPGEVERVSKEMR 420
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A835Z485_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z485_9STRA) HSP 1 Score: 184 bits (468), Expect = 6.330e-43 Identity = 309/1255 (24.62%), Postives = 430/1255 (34.26%), Query Frame = 1
Query: 1372 SSVLCIKCRKALDDLGNIADALEKERQLKGEVRLQCHGYRLLLPNLKGYRPPRTVAWVRTVMRAVLRAKIWDDSVLRYKQDLRVRFPEFAYSWFEPSKASMATANAIE---RSKLVAQANDDRWGLYYGAKALARENAEATIFWHVLK*NQRRGLPDIPCVLSLASSRNCREDSARTMGN--RKATRAQTYTPLSVR*ERPEGLLKNAAEAKAAIGTGQTPKQRSTLSRTKYFRVEGMLYGYSQTTQWRR*TTCL*R-------LWRIRSGRCWKRRKLSRYHARSSPDQDPSPLALICFCSFASCSIPSRRSRSTAERR*DSCLRRRRPAS*QTTPPSTETVCWTRTHP----------------------LLRRPPTAASLERER*--L*ISHNSW*SHARYGRR*QHQTL*PCSATRTRRQTGKLTTRRS*D*RTGGSSLAMLFNFRCTCRVAPTWVARG*TSRRRVIWAPSCIATTTSCSQQ*KTSKKPYPRAP*SSWSNVKEAWREN*QT*GFLCHNVCRMIIRFIGRAKR*-----ARVDLGVLFNP----------------KKPHPRRCQSTARDPRRVQEVAGDNVPCPERQTRVWAGYSSPPERART*CKNGGG-------IPGIR--GCVFRSQD*-FQISDIRENSG--------KTCGGESSAGLEEETLPVLRGTFSHARTLSPRLPEG---------IGRNHLQS-----------------CSPPAPL-----GPAAGRGSIHSQAMG*FANRAERLPHEQDFF----------------------------LPRP---AALSWVTFNHLLRQWGR-----RSLQSARRTTC-----------SSTCDPLSGPPEASTVRGVLGVFAAPESGLPCVDDTEFHDE-EALAFYLRAVVTFHRIRD--DMAQSGTPQGPRGARPKGEGYASHLRRIGGLERLIMTPGRSSGCGAAPDDQGEGYKLAGLNLSTIIDDGPKAIDELFPVSYQDPKTGRQHWHERVEVVEAVAKELFDRCSQPPPIAKTGSDAAALMRAPVSEVQTSFRRLL-GHPALSG-GKCGLIDVDEVLWLFMRHWLVVRQHRRDLVDHALGLMEALPPTTPGSPSETLRPS----PLVSVDAF---------RAGVAQFEELSRSTPPRQVSELIYSDAYMMALGSTRQRGNEALSHAEIIKTAILSSPLLLWDVSGARQEQVIPPNFSLRAMRSWLLFAWSSYASALQTQLPLLARELQ 4623
SSVLCIKCR++LDDL NI +AL E + K RLQC+ YRLLLPNL G +P R VAWVR +MRAV+RAK+WDD+VLR +QD RVRFPEF Y++FEP +A+ A A+ R +L +A++ RW LYYG KAL REN EA +FW +L Q D + A + R R A YT L A A V+G L + +W + R + ++S P+Q LA + SR R P + PPS +T LL R + E + + + RR + + +A+R S D GG A R + W RR + P + + T + + + ++A F ++F G A R +R D G L P K HP + P E AG + Q V A +R + GGG I G R G R + + +R SG + GG + E L L F LP G I L+ C PPA L G GRG + S+ + + +++L E F LP+P L+ +T+ LL +WG R+ C S L P + G A P S L D + D+ ++FYL+AV HR RD + AQS P P G LFP + QD TG+ W E +V+ A A+ LF+ S G A A VS+VQ SF +L+ G AL+ G DVD+VLWL M+HWLVVR+HR+ L + PL S++ F AG + Q+S Y++A + + +QR + A A+L+SP +WD+ G R A+R ++L AW YAS L+++LP L L+
Sbjct: 757 SSVLCIKCRRSLDDLANIKEALAAEARSKNAPRLQCYAYRLLLPNLGGAKPQRPVAWVRAMMRAVVRAKVWDDAVLRAQQDKRVRFPEFVYAFFEPPRAAAAAVAALSADGRQRLAREADESRWALYYGVKALCRENCEARLFWQLLDETQGE---DWAAFFTYALAVGAAGAPLRAQWGPLRAAGTLHEYTQQ----------LSTAGGAAXXXXXXXXXXXXXXXXXXXXXXVDGDLDAAKRAPXXXXXXXXXXXXXAGAEIIWVPTADALAAARHIL---SKSLPEQREQELAAVXXXXXXXXXXXXSVSREG-----------RMPPAAAALPPSAAVSKQPKTEAGGPAGGSREGVPAGEEGCLDLFLLMRVLLHSYKEEQASVLMRVLXXXXXXXXXVNRRAAVRLMFETAASRP--------PTASVDEAGGGGEGAGGEGDRPGRLLRGLW-------RRSTVDLPQFLVIARALHPDITTGE---------AAAVYRDAHERGGGAVDFEAFLSAADQLQFFGNALRLRPHVPSRADAGALGAPVRAQIGSLVHLHYHALKASHPALLAAHEGLP----EAAGAKLL--RAQKLVEAELQEAGQR-----RGGGGAGFTWADIDGARPLGAFRRLLGLLYHLRTLRHESGPGHESPVAERAGGRWAVRATERELRALESVFLD-------LPPGAVLSAAIGTIATTRLKMAVIKVQRSWKACLSRRLCLPPAALLILRPGYLRGRGGLISRLVMRPPSWSQQLIAEVYAFRLAGPTVYKVHIIYALRLADEERAHRLGLPKPFPPVTLAHLTYRLLLARWGAPVLAVRAFHDLFAKACIXXXXXXXXNVRSLAPAL---PRLRLFAAMAGCLAPPRSSLSAATDADLKDDGHTVSFYLKAVQEIHRQRDLWESAQSMEPVDASQGAPPGS-------------------------------------------------------PLFPCTSQDALTGQLFWTEPEQVLTAAARALFESASS-----ARGGGAGAAWMGKVSDVQISFGKLMAGVAALAQRGAAREADVDDVLWLVMQHWLVVRRHRQSLXXXXXXXXXXXXXXXXXXXXXXXXAAVVCGPLFSLERFVAAEGGYLGAAGAGGAVAGLSAEDALQISAESYANALRLQWPTQQQRRTPQAAFA----AAMLASPKAMWDMGGTRAPAAGAGAADASALRGFVLQAWMDYASPLKSKLPALVTSLE 1875
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A7S3Y4T6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4T6_HETAK) HSP 1 Score: 165 bits (417), Expect = 2.190e-41 Identity = 79/145 (54.48%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 1372 SSVLCIKCRKALDDLGNIADALEKERQLKGEVRLQCHGYRLLLPNLKGYRPPRTVAWVRTVMRAVLRAKIWDDSVLRYKQDLRVRFPEFAYSWFEPSKASMATANAIE-RSKLVAQANDDRWGLYYGAKALARENAEATIFWHVL 1803
+SVLC++CRK L+DL NI +AL ++++ +LQC+ +RLLLPNLKG+RPPR WVR VMRA+L+AK DD++L R RFPEF ++WFEPS A + A + + ++KL+ +A+ +RWGLYYGAKALARE+AEA +FW +L
Sbjct: 80 TSVLCVRCRKELNDLNNIREALAGGQEVR---KLQCYAFRLLLPNLKGHRPPRRATWVRAVMRAILKAKARDDALLAGAGRRRTRFPEFVFAWFEPSPAQLEAATSEQLKNKLIEEADHNRWGLYYGAKALARESAEAKLFWALL 221
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A8J2SJG2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJG2_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.900e-33 Identity = 211/812 (25.99%), Postives = 330/812 (40.64%), Query Frame = 3
Query: 432 AVGLGPEDWISIQRLLGGCLFEQKWIDLTCGELCEQMVVTCLPHGKLLQEIRRRSASVFNSLHGLYSDLLWVLDRCVASLLRGRIERDKAEE-KWIRKLANTRTDHEARTKAIQESREFEQEE--QARAKSEAKFQVVR-MGDTLRTLNGIFKTMQEDWKTMAE*T*KIVQSPGRRSCHGRKRQKSFRAQEETPPK*RQRCRC*RRSSRTQSCGRPG*KRKWSNTNRSYRSSWITRPGA*SRSKPKKAGTDTVVEGSEDGSVDGESKKKNAKIVRRTPVTSGSSLVRARTAAKEVGGXXXXXXXXXXXXXKDTKRK*IICPLHQVP*GS*RPWQHRRCAGEGEAAQGRGAPAVSRLPPASAQLEGVQAPTHGSVGSDGNASRLTGKDLGRQRFEVQARPAGPLPRVRLFLVRAIQG*-------HGHRQ--RHRKVEACGAGKRRP------VGAVLRRQGTGARER*SDNLLARPKMKPTERTT*HSLCTVSSVIEELPGG-------FCENDGESKSDT------CTDLHT---LKRKVGEARGLTQECSRSEGGDRDRADSKAKVDAVANEVLSSGRDVVWLLSNDAVEAVNHVLVKALEDQKWKVLEATKAISVSCEVVSRPGPFST--CVDLFLFLRIMLHSFKEEQVNRRAAVRLMFETATTGVLTDDTPIYGDSVLDQNTPSVAETTYSSLLRERKVIVDLPQFMVITRTLWPEVTTSDAVTLFRDAHEETNGEVDYETFLRLADRWQFFSNALQLPVHMPSRSDVGRPGLDVATKGNLGALVHRHYNLMQPAVENVKETLPESA 2756
++G+ W + + LG C+FEQKW D C EL Q+ V CL HG+L+ +R R SVF+ + L+SD LW LD+ + + D+ EE + +R+ + E R +A+Q++ ++ + K + Q R + +T+++LNGIF+ MQ D K + + + R G+K + + +E + C + S R ++ +S + ++ K ++A E K+ AK+ + AA E G ++ ++C +C G+ + A+ P +L HG RL LG +R P + VR + RAI G HG +Q R R E A P + + RR+ + L KM E S+++E GG +C ++ + C +T LK KV E + + D + + A+ + G+ VWL DA+EA VL K + L+AT+ I+V E S CVD+ L+LR++ H ++EEQ +RRAAVRLMFETA G + P YG TP E + VDLPQF+ I RTL P+ +T+ A L+R+AHE + G VDYE FL ++ +FF+ AL LP H S D P + + LG LV +M ++ V+ TL + A
Sbjct: 186 SMGVTSHLWKNARDDLGACVFEQKWADQVCSELVAQVTVGCLEHGRLVDSLRERFGSVFDRVCRLHSDALWQLDKACGEISSSK---DRIEELEQLRRDDKVNLEREKR-EALQDANNNHSDQLLELNKKDNEQRQANRKLKETVKSLNGIFQDMQRD-KDL------VNKGDMRNVMRGQKEELAALREEVEELR-----HCKKDSMRVPVL------------EKTIQSMHRAQEALEAKLKDREAIVAMYQE------------KEAAKLREEELAKERQAQKEGELAALERDGHLEKEPEEELDDAEEDPLANVLCI---------------KC-GKSLSDMANIREAIVGPEPEPPRLV-----CHGY--------RLLLPPLGGER------PPRSITWVRRCM-RAIIGALLRDHASHGPQQEGRARFPEFAYAFFEPPRKYLDSLHSTERREAIKVADDDRWGLYYGAKMLSRESD---EAKLFWSLLDESHGGDFLAFYLYCNELIQTTAGVVLNAQGCVFANTYYELKEKVKEFEAHAKMRKKVGANPADPPWDRLAAISDADALALGGQQCVWLPLVDALEATEKVLQKGNPRLREGALKATRDIAVEAEGRSSKWGAKQLECVDMALWLRVLTHLYREEQAHRRAAVRLMFETALAGTIAVHAPDYGTG----RTPEAPERNDDP--KAPPPCVDLPQFVAIVRTLLPDASTTYAAALYREAHEASKGNVDYEVFLDTCEKQRFFARALALPHHARSPRDFPLP---LEARRQLGGLVQMRARMMSNLMDRVEGTLADHA 909
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A836CEG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG2_9STRA) HSP 1 Score: 137 bits (345), Expect = 7.700e-29 Identity = 71/134 (52.99%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1372 SSVLCIKCRKALDDLGNIADALEKERQLKGEVRLQCHGYRLLLPNLKGYRPPRTVAWVRTVMRAVLRAKIWDDSVLRYKQDLRVRF----------PEFAYSWFEPSKASMATANAIE---RSKLVAQANDDRW 1734
SSVLCIKCR++LDDL NI +AL E + K RLQC+ YRLLLPNL G +P R VAWVR +MRAV+RAK+WDD+VLR +QD RVRF P Y++FEP +A+ A A+ R +L +A++ RW
Sbjct: 757 SSVLCIKCRRSLDDLANIKEALAAEARSKNAPRLQCYAYRLLLPNLGGAKPQRPVAWVRAMMRAVVRAKVWDDAVLRAQQDKRVRFTPELVTSACAPGVVYAFFEPPRAAAAAVAALSADGRQRLAREADESRW 890
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A7S1UHR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHR8_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.480e-28 Identity = 70/183 (38.25%), Postives = 113/183 (61.75%), Query Frame = 3
Query: 2220 CVDLFLFLRIMLHSFKEEQVNRRAAVRLMFETATTGVLTDDTPIYGDSVLDQNTPSVAETTYSSLLRERKVIVDLPQFMVITRTLWPEVTTSDAVTLFRDAHEETNGEVDYETFLRLADRWQFFSNALQLPVHMPSRSDVGRPGLDVATKGNLGALVHRHYNLMQPAVENVKETLPESAVKQL 2768
CVDLFLF+RI++H +++EQ NRRAA+RLMFETA+TG+L ++ P+YG++ + + ++ E K+ VD PQ + I RTL P+++T+ +FRDA+E G+V + F++ A+ FF++ LQL +P + + L + L A VH ++ L QP + + LPE A ++L
Sbjct: 99 CVDLFLFMRILMHVYRQEQTNRRAALRLMFETASTGILQNENPMYGNTA--RLAAARKNLAFNDTGDEVKISVDFPQLLSIVRTLQPQISTAAGAAIFRDAYELGQGQVHIDAFVQAAEMRHFFTSTLQL---VPLQLAHQQLDLPARVREGLRATVHFNFMLKQPIFRQIAQNLPEGARERL 276
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A7S3H9V5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9V5_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.610e-27 Identity = 65/145 (44.83%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 1372 SSVLCIKCRKALDDLGNIADALEKERQLKGEV-RLQCHGYRLLLPNLKGYRPPRTVAWVRTVMRAVLRAKIWDDSVLRYKQDLRVRFPEFAYSWFEPSKASMATANAIERSKLVAQANDDRWGLYYGAKALARENAEATIFWHVL 1803
+SVLCIKC+K+LDDL NI A+ + G ++QC +R+LLPNLKG +P R W+R MR++L K+ +D L++ + RFP F Y+WF + S ++ + KL A +++DRWGLYYG KALA+E+ EA +FW +L
Sbjct: 164 TSVLCIKCKKSLDDLSNIRSAILGDNSQAGRTAKMQCEAFRILLPNLKGRQPNRHSKWLRNCMRSILMCKLKEDVHLQFIKGNCTRFPAFVYAWFV--RKSEGRSSGAQLVKLNAASDEDRWGLYYGVKALAKEDPEALVFWSLL 306
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A482RZ46_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ46_9ARCH) HSP 1 Score: 124 bits (312), Expect = 7.850e-27 Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 1372 SSVLCIKCRKALDDLGNIADALEKERQLKGEVRLQCHGYRLLLPNLKGYRPPRTVAWVRTVMRAVLRAKIWDD-SVLRYKQDLRVRFPEFAYSWFEPSKASMATANAIERSKLVAQANDDRWGLYYGAKALARENAEATIFWHVL 1803
+SVLCIKC+K+LDD+ NI AL +R+ + C YR+LLPNL+G +P R+V W+R MR++L +K+ +D ++L K D+ RFP + Y+WF S A +K + +++DRW LYYG KAL RE++E IFW +L
Sbjct: 40 TSVLCIKCKKSLDDMTNIRAALIGDREQHNGQKQVCENYRILLPNLRGKKPARSVHWLRLCMRSILLSKMKEDLTLLAIKSDIS-RFPGYVYAWFNRSIEGQVGAAL---TKTLVLSDEDRWALYYGCKALCREDSECQIFWQLL 180 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig953.24.2 >prot_A-nodosum_M_contig953.24.2 ID=prot_A-nodosum_M_contig953.24.2|Name=mRNA_A-nodosum_M_contig953.24.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=487bp MAQSGTPQGPRGARPKGEGYASHLRRIGGLERLIMTPGRSSGCGAAPDDQback to top mRNA from alignment at A-nodosum_M_contig953:107510..129655- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig953.24.2 ID=mRNA_A-nodosum_M_contig953.24.2|Name=mRNA_A-nodosum_M_contig953.24.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=22146bp|location=Sequence derived from alignment at A-nodosum_M_contig953:107510..129655- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig953:107510..129655- >mRNA_A-nodosum_M_contig953.24.2 ID=mRNA_A-nodosum_M_contig953.24.2|Name=mRNA_A-nodosum_M_contig953.24.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1461bp|location=Sequence derived from alignment at A-nodosum_M_contig953:107510..129655- (Ascophyllum nodosum dioecious)back to top |