prot_A-nodosum_M_contig953.24.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig953.24.2
Unique Nameprot_A-nodosum_M_contig953.24.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length487
Homology
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: D7FIZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ8_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 8.780e-112
Identity = 219/476 (46.01%), Postives = 297/476 (62.39%), Query Frame = 0
Query:   32 RLIMTPGRSSGCGAAPDDQGEGYKLAGLNLSTIIDDGPKAIDELFPVSYQDPKTGRQHWHERVEVVEAVAKELFDRCSQPPPIAKTGSDAAALM-------RAPVSEVQTSFRRLLGHPALSGGKCGLIDVDEVLWLFMRHWLVVRQHRRDLVDHALGLMEALPPTTPGSPS-----ETLRPSPLVSVDAFRAGVAQFEELSRSTPPRQVSELIYSDAYMMALGSTRQRGNEALSHAEIIKTAILSSPLLLWDVSGARQEQVIPPNFSLRAMRSWLLFAWSSYASALQTQLPLLARELQGLMDSDDA------PVGNDSPQAGVGLAKAEPKRTSAVAQTGQFSFWLGDDNERKHLARVLEHAQTEIDRLDKIMKELHIFH-EDSICYRRSGSIGGEVGDVGEVPKKQQQTPAREMQKSYSR-STIERISSELRDLFTVLSSAYRLIRPNDRRGFVQDI-ALGKRASLRRFSFNSY 486
            R++ + G ++G G A  D GEG  L GL+++ ++ DGPK I ELFPV+ QDP+TGRQ+WHE   V EAVAKELFD+CSQPPP+ K                RA VS VQ S  +L+GHPA++GG+   +DVD+ LWLFMRHWLVVRQHR  LVD ALG +   P +   + +     +   PSPLVSVD FR    + E +SRS PPR V++L+Y DA+M+A   +R+  N+A+SH E  KTA+LSSP+LLWD SGAR+EQ +PP FS RAMRSWLL +W+ Y+  ++ ++ ++  ELQ + D+  A      P G +S  A +   +A P  T   A+    S     + E   L R LE  ++E++RLD  MK+L  FH EDS+    +  I  E     E  ++Q+QT + E+ K  SR   +ER S E+R +  +L++ YR +RPND R FVQD  A G+R SLRR SFNSY
Sbjct: 1310 RILASMG-TTGSGIAGSDAGEGSALGGLDVTAMMGDGPKPIKELFPVTLQDPRTGRQYWHESPAVTEAVAKELFDKCSQPPPVEKGPGXXXXXXXXXXXPARARVSGVQMSLGKLMGHPAITGGREKRVDVDDALWLFMRHWLVVRQHRISLVDRALGQVAPAPSSAASAAAGNDAAQAASPSPLVSVDGFRVVTTRLENMSRSAPPRGVADLVYVDAFMVASSLSRRPENKAMSHRESTKTALLSSPVLLWDASGARREQQMPPLFSNRAMRSWLLSSWARYSDPIKAEVLVMLEELQHVSDTTPANGITQEPTGVESAAADLPAGEA-PAHTPTGARGSGGSAARPANVEAAKLVRALEKIRSEVNRLDGYMKDLDTFHKEDSMAQSTAVVIPKEAS--AEQQEQQEQTLSPEIVKKLSRPGEVERASKEMRSVMMILAAVYRRMRPNDPRDFVQDSWASGRRTSLRRTSFNSY 1781          
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A6H5LD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD55_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.870e-98
Identity = 184/429 (42.89%), Postives = 256/429 (59.67%), Query Frame = 0
Query:   40 SSGCGAAPDDQGEGYKLAGLNLSTIIDDGPKAIDELFPVSYQDPKTGRQHWHERVEVVEAVAKELFDRCSQPPPIAK-----------TGSDAAALMRAPVSEVQTSFRRLLGHPALSGGKCGLIDVDEVLWLFMRHWLVVRQHRRDLVDHALGLMEALPPTTPGSPS-----ETLRPSPLVSVDAFRAGVAQFEELSRSTPPRQVSELIYSDAYMMALGSTRQRGNEALSHAEIIKTAILSSPLLLWDVSGARQEQVIPPNFSLRAMRSWLLFAWSSYASALQTQLPLLARELQGLMDSDDAPVGNDSPQAGVGLAKAE------PKRTSAVAQTGQFSFWLGDDNERKHLARVLEHAQTEIDRLDKIMKELHIFHEDSICYRRSGSIGGEVGDVGEVPKKQQQTPAREMQKSYSR-STIERISSELR 445
            ++G G A  D GEG  L GL+++ ++ DGPK I ELFPV+ QDP+TGRQ+WHE   V EAVAKELFD+CSQPPP+ K                 A  RA VS VQ S  +L+GHPA++GG+   +DVD+ LWLFMRHW VVRQHR  LVD ALG +   P +   + +     + + PSPLVSVD FR    + E +SRS PPR V++L+Y DA+M+A   +R+  N+A+SH E  KTA+LSSP+LLWD SGAR+EQ +PP FS RAMRSWLL +W+ Y+  ++ ++ ++  ELQ + D+  A      P AGV  A A+      P  T   A+    S     + E   L R LE  ++E         +L  FH++    + + ++  +     E  ++Q+QT + E+ K  SR   +ER+S E+R
Sbjct:    3 TTGSGIAGSDAGEGSALGGLDVTAMMGDGPKPIKELFPVTLQDPRTGRQYWHESPAVTEAVAKELFDKCSQPPPVEKGPGXXXXXXXXXXXXXXAPARARVSGVQMSLGKLMGHPAITGGREKRVDVDDALWLFMRHWSVVRQHRISLVDRALGQVAPAPSSAASAAAGNDAAQAVSPSPLVSVDGFRVVTTRLENMSRSAPPRGVADLVYVDAFMVASSLSRRPENKAMSHRESTKTALLSSPVLLWDASGARREQQMPPTFSNRAMRSWLLSSWARYSDPIKAEVLVMLEELQYVSDTTPADGITQEP-AGVENAAADLPAGGAPAHTPTGARGSGGSAARPANVEAAKLVRALEKIRSE---------DLDTFHKEGSMAQSTAAVIPKEASA-EQQEQQEQTLSPEIVKKLSRPGEVERVSKEMR 420          
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Match: A0A835Z485_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z485_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.960e-18
Identity = 80/259 (30.89%), Postives = 116/259 (44.79%), Query Frame = 0
Query:   75 LFPVSYQDPKTGRQHWHERVEVVEAVAKELFDRCSQPPPIAKTGSDAAALMRAPVSEVQTSFRRLL-GHPALSG-GKCGLIDVDEVLWLFMRHWLVVRQHRRDLVDHALGLMEALPPTTPGSPSETLRPS----PLVSVDAF---------RAGVAQFEELSRSTPPRQVSELIYSDAYMMALGSTRQRGNEALSHAEIIKTAILSSPLLLWDVSGARQEQVIPPNFSLRAMRSWLLFAWSSYASALQTQLPLLARELQ 318
            LFP + QD  TG+  W E  +V+ A A+ LF+  S        G  A A     VS+VQ SF +L+ G  AL+  G     DVD+VLWL M+HWLVVR+HR+ L                         +    PL S++ F          AG         +    Q+S   Y++A  +   + +QR     + A     A+L+SP  +WD+ G R            A+R ++L AW  YAS L+++LP L   L+
Sbjct: 1626 LFPCTSQDALTGQLFWTEPEQVLTAAARALFESASS-----ARGGGAGAAWMGKVSDVQISFGKLMAGVAALAQRGAAREADVDDVLWLVMQHWLVVRRHRQSLXXXXXXXXXXXXXXXXXXXXXXXXAAVVCGPLFSLERFVAAEGGYLGAAGAGGAVAGLSAEDALQISAESYANALRLQWPTQQQRRTPQAAFA----AAMLASPKAMWDMGGTRAPAAGAGAADASALRGFVLQAWMDYASPLKSKLPALVTSLE 1875          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig953.24.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIZ8_ECTSI8.780e-11246.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LD55_9PHAE1.870e-9842.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z485_9STRA1.960e-1830.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig953contigA-nodosum_M_contig953:107842..125369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig953.24.2mRNA_A-nodosum_M_contig953.24.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig953 107510..129655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig953.24.2 ID=prot_A-nodosum_M_contig953.24.2|Name=mRNA_A-nodosum_M_contig953.24.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=487bp
MAQSGTPQGPRGARPKGEGYASHLRRIGGLERLIMTPGRSSGCGAAPDDQ
GEGYKLAGLNLSTIIDDGPKAIDELFPVSYQDPKTGRQHWHERVEVVEAV
AKELFDRCSQPPPIAKTGSDAAALMRAPVSEVQTSFRRLLGHPALSGGKC
GLIDVDEVLWLFMRHWLVVRQHRRDLVDHALGLMEALPPTTPGSPSETLR
PSPLVSVDAFRAGVAQFEELSRSTPPRQVSELIYSDAYMMALGSTRQRGN
EALSHAEIIKTAILSSPLLLWDVSGARQEQVIPPNFSLRAMRSWLLFAWS
SYASALQTQLPLLARELQGLMDSDDAPVGNDSPQAGVGLAKAEPKRTSAV
AQTGQFSFWLGDDNERKHLARVLEHAQTEIDRLDKIMKELHIFHEDSICY
RRSGSIGGEVGDVGEVPKKQQQTPAREMQKSYSRSTIERISSELRDLFTV
LSSAYRLIRPNDRRGFVQDIALGKRASLRRFSFNSY*
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