mRNA_A-nodosum_M_contig930.7.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 500 bits (1287), Expect = 2.570e-172 Identity = 251/392 (64.03%), Postives = 295/392 (75.26%), Query Frame = 1
Query: 4 LDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAP-EASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSNT 1170
LDDS + + +P ++ KWLLT+EL + G+VFYCRG+SI GDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ Y GRSFLNCVSE + E CVGQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT IA+ GG AAGIFLHRSSD V+DNVV+DMQDAG+A+LES +ADI+ N F++VK+GIR+SLG N+V++N+F++ S GLYTYQGSD P + SDGRP +N F +N I N GVKIKE D+T+IT N FTGTS LEF DA T W NT
Sbjct: 111 LDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD--------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNT 488
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 471 bits (1211), Expect = 1.200e-161 Identity = 236/398 (59.30%), Postives = 281/398 (70.60%), Query Frame = 1
Query: 1 ILDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 1167
+LD S + +PTSVT KWLL +EL+V +G++FYC G+ GDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YE GRSFLNCVSE + ETC G KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +AN GG A GIFLHRSSD+ EVY N +++M DAG+A+LESF+ADIH N V++GIR+SLG G N+VYDN F++CS +GLYTY GSD P+ S+ GRP N+F +N ++N+ GVK K +DN ++T N FTGT LEF DA T WS N
Sbjct: 46 MLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGN 430
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 484 bits (1246), Expect = 2.650e-161 Identity = 238/389 (61.18%), Postives = 275/389 (70.69%), Query Frame = 1
Query: 1 ILDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 1167
+LDD + P+ +T WLL +EL++ G VFYC+GTS GDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE+GRSFLNCVSE + + C G KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA GG AAGIFLHRSSD V+DN + +MQDAG+A+LESFDA I+GN KYGIR+SLG GNN VY N F + SQYGLYTY+GSD P+ S DGRP N N + + GVKIKE D+ NTF EF ++T T WS N
Sbjct: 473 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 449 bits (1154), Expect = 2.870e-153 Identity = 223/390 (57.18%), Postives = 269/390 (68.97%), Query Frame = 1
Query: 1 ILDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEY-ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 1167
+LD +D + + T+ TGKWLLT++LFV G+ YCRG + G+C ELRI+ST +DF E+RGHGG+LYFE T+VTSWD + PQE Y+DGRSF+ CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA GG AAGIFLHRS D EVY N + +M DAG+A+LE+ DIH N ++GIR+ LG NN V+DNVF G++TY GSD P GRP +N FY+NTI TETGVKIKE+DN IT N F+GT+ +EFN+A WS N
Sbjct: 35 VLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCA---INNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGN 420
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 414 bits (1063), Expect = 8.020e-141 Identity = 204/328 (62.20%), Postives = 234/328 (71.34%), Query Frame = 1
Query: 1 ILDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQ 954
+LDD + P+ +T WLL +EL++ G VFYC+GTS GDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE GRSFLNCVSE + + C G KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT IA+ GG A GIFLHRSSD V+DN + +MQDAG+A+LE+FDA I+GNT KYGIR+SLG GNN VY N F + SQ
Sbjct: 22 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD--------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 9.870e-140 Identity = 229/389 (58.87%), Postives = 259/389 (66.58%), Query Frame = 1
Query: 1 ILDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 1167
+LDDS + + SPTSVT KWLL SEL+V G++FYC G+ GDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YE GRSFLNCVSE + ETC G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA XXXXXXXXXXXX GG A GIFLHRSSD+ EVY G DAP+ S+ GRP N+F +N I+NT GVKIK +DN +I+ N FTGT LEF DA T WS N
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDN 333
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 385 bits (989), Expect = 8.160e-126 Identity = 207/401 (51.62%), Postives = 261/401 (65.09%), Query Frame = 1
Query: 1 ILDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDET--CVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEA-SSDGRPGENSFYDNTISNT--ETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSNT 1170
+LD+++D++ + TG WLL L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N +E DGRSF+NCV++++ C G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+N GGE A GIFLHRSSD EV+DNVVY+MQDAG+A++ES+DA+I+ N+FTN +YGIR+SLG G N + +N+F +QYGLYTY GSD P+ +S+GRP +N F NTI GV IKE D+ + N FTG S EF D++ T W NT
Sbjct: 216 VLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 381 bits (978), Expect = 1.000e-121 Identity = 207/396 (52.27%), Postives = 254/396 (64.14%), Query Frame = 1
Query: 1 ILDDSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESD--ETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSD--GRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLE---FNDATGTAWSSN 1167
+LD +D+++ S TG WLL ++ V GS+ G GD LRIQSTGS D++E+RGHGGSL F T VTSWDT K NY+ RSF+ CVSE +D +TC G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA GGE A GIFLHRSSD CEV+ N VYDM+DAG+AI+ES A IH NTFTNVKYGIR+S+G N V +N F EC QYG+YTYQG+D PEAS D G +N+F+ NT+ E GVKI++A+ + T N F S E F D W++N
Sbjct: 428 VLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNN 818
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 354 bits (909), Expect = 2.250e-115 Identity = 188/360 (52.22%), Postives = 225/360 (62.50%), Query Frame = 1
Query: 37 TSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTF 1110
TS TG WLLT EL+V G G+ GD DELR+ ST T F +R HGGSL F T V SWDT SP E+ DGRS+++ +SE + DETC G KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI + GG E +AGIFLHRSSD V N V+D DAGLA+LESF+AD+ NTF N KYG+R S+G +N +N ++Y Y+Y G+D P+ S GR N F N+ S E +KIKEAD T N F
Sbjct: 97 TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 352 bits (903), Expect = 2.030e-114 Identity = 197/393 (50.13%), Postives = 241/393 (61.32%), Query Frame = 1
Query: 10 DSDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTF-TGTS---LLEFNDATGTAWSSNT 1170
DS D+ + T G WLLT EL+V G GT GD DELR+ ST T + +R HGGSL F T V SWDT SP E+ DGRS+++ VSE + DETC G KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI + GG E +AGIFLHRSSD V N V+D DAGLA+LESF+AD+ NTF N KYG+R+S+G +N +N+ S+Y YTY GSD P+ S GR N F N+ S E +KIKEAD T N F G + ++ F+DA + NT
Sbjct: 95 DSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig930.7.1 >prot_A-nodosum_M_contig930.7.1 ID=prot_A-nodosum_M_contig930.7.1|Name=mRNA_A-nodosum_M_contig930.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=382bp MYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHback to top mRNA from alignment at A-nodosum_M_contig930:121778..123995- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig930.7.1 ID=mRNA_A-nodosum_M_contig930.7.1|Name=mRNA_A-nodosum_M_contig930.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2218bp|location=Sequence derived from alignment at A-nodosum_M_contig930:121778..123995- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig930:121778..123995- >mRNA_A-nodosum_M_contig930.7.1 ID=mRNA_A-nodosum_M_contig930.7.1|Name=mRNA_A-nodosum_M_contig930.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1146bp|location=Sequence derived from alignment at A-nodosum_M_contig930:121778..123995- (Ascophyllum nodosum dioecious)back to top |