prot_A-nodosum_M_contig930.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig930.7.1
Unique Nameprot_A-nodosum_M_contig930.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length382
Homology
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 3.560e-170
Identity = 247/383 (64.49%), Postives = 289/383 (75.46%), Query Frame = 0
Query:    3 SPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAP-EASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSNT 382
            +P  ++ KWLLT+EL +  G+VFYCRG+SI GDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ  Y  GRSFLNCVSE  + E CVGQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++  SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT  IA+                             GG  AAGIFLHRSSD   V+DNVV+DMQDAG+A+LES +ADI+ N F++VK+GIR+SLG   N+V++N+F++ S  GLYTYQGSD P +  SDGRP +N F +N I N   GVKIKE D+T+IT N FTGTS LEF DA  T W  NT
Sbjct:  120 NPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD--------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNT 488          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 1.030e-160
Identity = 233/388 (60.05%), Postives = 276/388 (71.13%), Query Frame = 0
Query:    3 SPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 381
            +PTSVT KWLL +EL+V +G++FYC G+   GDCDELRIQSTG  D++EVRGHGGS+YF  T+VTSWDTPNK PQE YE GRSFLNCVSE  + ETC G  KND GECRMDII+SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY            +AN                             GG  A GIFLHRSSD+ EVY N +++M DAG+A+LESF+ADIH N    V++GIR+SLG G N+VYDN F++CS +GLYTY GSD P+ S+ GRP  N+F +N ++N+  GVK K +DN ++T N FTGT  LEF DA  T WS N
Sbjct:   56 APTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGN 430          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 2.190e-160
Identity = 235/378 (62.17%), Postives = 270/378 (71.43%), Query Frame = 0
Query:    4 PTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 381
            P+ +T  WLL +EL++  G VFYC+GTS  GDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE+GRSFLNCVSE  + + C G  KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA                              GG  AAGIFLHRSSD   V+DN + +MQDAG+A+LESFDA I+GN     KYGIR+SLG GNN VY N F + SQYGLYTY+GSD P+ S DGRP  N    N + +   GVKIKE D+     NTF      EF ++T T WS N
Sbjct:  484 PSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 443 bits (1140), Expect = 2.830e-151
Identity = 220/378 (58.20%), Postives = 262/378 (69.31%), Query Frame = 0
Query:    5 TSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEY-ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 381
            T+ TGKWLLT++LFV  G+  YCRG  + G+C ELRI+ST  +DF E+RGHGG+LYFE T+VTSWD   + PQE Y+DGRSF+ CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  SE+YG+TWKVRGFC+D SNP+VFD  NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA                              GG  AAGIFLHRS D  EVY N + +M DAG+A+LE+   DIH N     ++GIR+ LG  NN V+DNVF      G++TY GSD P     GRP +N FY+NTI  TETGVKIKE+DN  IT N F+GT+ +EFN+A    WS N
Sbjct:   47 TTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCA---INNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGN 420          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 6.890e-140
Identity = 201/317 (63.41%), Postives = 229/317 (72.24%), Query Frame = 0
Query:    4 PTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQ 310
            P+ +T  WLL +EL++  G VFYC+GTS  GDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE GRSFLNCVSE  + + C G  KN+ GECRMDII+SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVFD TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT  IA+                             GG  A GIFLHRSSD   V+DN + +MQDAG+A+LE+FDA I+GNT    KYGIR+SLG GNN VY N F + SQ
Sbjct:   33 PSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD--------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 1.390e-137
Identity = 225/379 (59.37%), Postives = 252/379 (66.49%), Query Frame = 0
Query:    3 SPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSN 381
            SPTSVT KWLL SEL+V  G++FYC G+   GDCDELRIQSTG  D++EVRGHGGS+YF  T+VTSWDTPNK PQE YE GRSFLNCVSE  + ETC G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA XXXXXXXXXXXX                 GG  A GIFLHRSSD+ EVY                                                        G       DAP+ S+ GRP  N+F +N I+NT  GVKIK +DN +I+ N FTGT  LEF DA  T WS N
Sbjct:   11 SPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDN 333          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 9.720e-125
Identity = 204/386 (52.85%), Postives = 251/386 (65.03%), Query Frame = 0
Query:    8 TGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDET--CVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEA-SSDGRPGENSFYDNTISNT--ETGVKIKEADNTIITGNTFTGTSLLEFNDATGTAWSSNT 382
            TG WLL   L V+ GS     GT+  GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N   +E   DGRSF+NCV++++      C G+   ++GECRMDII S MG +GWFD+ESYGLTWKVRG C          N E+F+  NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+N                             GGE A GIFLHRSSD  EV+DNVVY+MQDAG+A++ES+DA+I+ N+FTN +YGIR+SLG G N + +N+F   +QYGLYTY GSD P+  +S+GRP +N F  NTI       GV IKE D+ +   N FTG S  EF D++ T W  NT
Sbjct:  229 TGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 8.210e-121
Identity = 204/383 (53.26%), Postives = 246/383 (64.23%), Query Frame = 0
Query:    6 SVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESD--ETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSD--GRPGENSFYDNTISNTETGVKIKEADNTIITGNTFTGTSLLE---FNDATGTAWSSN 381
            S TG WLL  ++ V  GS+    G    GD   LRIQSTGS D++E+RGHGGSL F  T VTSWDT  K    NY+  RSF+ CVSE  +D  +TC G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA                              GGE A GIFLHRSSD CEV+ N VYDM+DAG+AI+ES  A IH NTFTNVKYGIR+S+G   N V +N F EC QYG+YTYQG+D PEAS D  G   +N+F+ NT+   E GVKI++A+  + T N F   S  E   F D     W++N
Sbjct:  439 SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNN 818          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.200e-115
Identity = 188/360 (52.22%), Postives = 225/360 (62.50%), Query Frame = 0
Query:    5 TSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTF 362
            TS TG WLLT EL+V  G      G+   GD DELR+ ST  T F  +R HGGSL F  T V SWDT   SP E+  DGRS+++ +SE   + DETC G  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI +                            GG E +AGIFLHRSSD   V  N V+D  DAGLA+LESF+AD+  NTF N KYG+R S+G  +N   +N     ++Y  Y+Y G+D P+  S GR   N F  N+ S  E  +KIKEAD T    N F
Sbjct:   97 TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455          
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.080e-114
Identity = 194/381 (50.92%), Postives = 236/381 (61.94%), Query Frame = 0
Query:    8 TGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITGNTF-TGTS---LLEFNDATGTAWSSNT 382
            TG WLLT EL+V  G      GT   GD DELR+ ST  T +  +R HGGSL F  T V SWDT   SP E+  DGRS+++ VSE   + DETC G  KN  GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD  NVYG++ +SDIHH+ +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI +                            GG E +AGIFLHRSSD   V  N V+D  DAGLA+LESF+AD+  NTF N KYG+R+S+G  +N   +N+    S+Y  YTY GSD P+  S GR   N F  N+ S  E  +KIKEAD T    N F  G +   ++ F+DA  +    NT
Sbjct:  104 TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig930.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI3.560e-17064.49Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE1.030e-16060.05MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI2.190e-16062.17Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FRR8_ECTSI2.830e-15158.20Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE6.890e-14063.41MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FIU4_ECTSI1.390e-13759.37Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI9.720e-12552.85Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF5_9PHAE8.210e-12153.26MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G339_ECTSI1.200e-11552.22Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI1.080e-11450.92Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 199..221
e-value: 5.9
score: 15.9
coord: 352..380
e-value: 3200.0
score: 3.6
coord: 272..293
e-value: 19.0
score: 14.2
coord: 153..174
e-value: 2500.0
score: 4.3
coord: 175..197
e-value: 7400.0
score: 1.0
coord: 295..317
e-value: 190.0
score: 10.8
coord: 223..247
e-value: 95.0
score: 11.8
coord: 249..271
e-value: 1800.0
score: 5.4
coord: 330..351
e-value: 770.0
score: 8.0
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 156..305
e-value: 1.4E-16
score: 60.7
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 2..330
e-value: 2.1E-90
score: 305.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..338
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 152..367

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig930contigA-nodosum_M_contig930:121778..123971 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig930.7.1mRNA_A-nodosum_M_contig930.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig930 121778..123995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig930.7.1 ID=prot_A-nodosum_M_contig930.7.1|Name=mRNA_A-nodosum_M_contig930.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=382bp
MYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIDGDCDELRIQSTGSTDFH
EVRGHGGSLYFEKTLVTSWDTPNKSPQENYEDGRSFLNCVSEYESDETCV
GQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFD
TTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSD
YLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGEHAAGIFLHRSSD
SCEVYDNVVYDMQDAGLAILESFDADIHGNTFTNVKYGIRISLGGGNNNV
YDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIK
EADNTIITGNTFTGTSLLEFNDATGTAWSSNT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence