mRNA_A-nodosum_M_contig930.11.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 529 bits (1362), Expect = 2.660e-182 Identity = 271/436 (62.16%), Postives = 321/436 (73.62%), Query Frame = 1
Query: 127 EDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAP-EASSDGRPGENSFYDNTISNTETGVKIKEADNTIITDNTFTGTSLLEFNDATGTAWSSNTFKDANDDLCYKNFES 1425
E GC T+TDLY R+ESDG + KGPI+ LDD + + +P ++ KWLLT+EL + G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTP K+PQ Y GRSFLNCVSE + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT IA+ GG AAGIFLHRSSD V+DNVV+DMQDAG+A+LES +ADI++N F++VK+GIR+SLG N+V++N+F++ S GLYTYQGSD P + SDGRP +N F +N I N GVKIKE D+T+ITDN FTGTS LEF DA T W NT +C KN S
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD--------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 527 bits (1358), Expect = 9.840e-177 Identity = 263/440 (59.77%), Postives = 310/440 (70.45%), Query Frame = 1
Query: 73 KASIRWASGTGLNGRMYLEDGGCGTMTDLYMSR-VESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITDNTFTGTSLLEFNDATGTAWSSNTFKD 1389
+ S R+A+ +G+ GR+Y E GC TMTDLY R E+DG + KGP+Y+LDDD + P+ +T WLL +EL++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTP K PQE Y++GRSFLNCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA GG AAGIFLHRSSD V+DN + +MQDAG+A+LESFDA I+ N KYGIR+SLG GNN VY N F + SQYGLYTY+GSD P+ S DGRP N N + + GVKIKE D+ NTF EF ++T T WS N D
Sbjct: 427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 496 bits (1277), Expect = 2.770e-170 Identity = 251/428 (58.64%), Postives = 304/428 (71.03%), Query Frame = 1
Query: 127 EDGGCGTMTDLYMSR-VESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITDNTFTGTSLLEFNDATGTAWSSNT 1380
E GC T+TDLY R E+DG + KGP+Y+LD + +PTSVT KWLL +EL+V +G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTP K PQE Y+ GRSFLNCVSE + ETC+G KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +AN GG A GIFLHRSSD+ EVY N +++M DAG+A+LESF+ADIHDN V++GIR+SLG G N+VYDN F++CS +GLYTY GSD P+ S+ GRP N+F +N ++N+ GVK K +DN ++T+N FTGT LEF DA T WS N+
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNS 431
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 474 bits (1220), Expect = 6.470e-162 Identity = 236/419 (56.32%), Postives = 290/419 (69.21%), Query Frame = 1
Query: 127 EDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITDNTFTGTSLLEFNDATGTAWSSNT 1380
+ GGC T++DLY + + KGP+++LD +D + + T+ TGKWLLT++LFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE T+VTSWD + PQE YKDGRSF+ CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA GG AAGIFLHRS D EVY N + +M DAG+A+LE+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P GRP +N FY+NTI TETGVKIKE+DN IT+N F+GT+ +EFN+A WS N+
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNS 421
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 432 bits (1112), Expect = 6.360e-147 Identity = 217/350 (62.00%), Postives = 250/350 (71.43%), Query Frame = 1
Query: 148 MTDLYMSR-VESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQ 1164
MTDLY R E DG + KGP+Y+LDDD + P+ +T WLL +EL++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTP K PQE Y+ GRSFLNCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT IA+ GG A GIFLHRSSD V+DN + +MQDAG+A+LE+FDA I+ NT KYGIR+SLG GNN VY N F + SQ
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD--------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 1.670e-137 Identity = 227/390 (58.21%), Postives = 261/390 (66.92%), Query Frame = 1
Query: 211 ILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITDNTFTGTSLLEFNDATGTAWSSNT 1380
+LDD + + SPTSVT KWLL SEL+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTP K PQE Y+ GRSFLNCVSE + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA XXXXXXXXXXXX GG A GIFLHRSSD+ EVY G DAP+ S+ GRP N+F +N I+NT GVKIK +DN +I++N FTGT LEF DA T WS N+
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNS 334
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 1.270e-135 Identity = 222/431 (51.51%), Postives = 282/431 (65.43%), Query Frame = 1
Query: 121 YLEDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEYESDET--CEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEA-SSDGRPGENSFYDNTISNT--ETGVKIKEADNTIITDNTFTGTSLLEFNDATGTAWSSNT 1380
Y E GGCGT+T +Y ++ E DG P+Y+LD+++D++ + TG WLL L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT +E DGRSF+NCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+N GGE A GIFLHRSSD EV+DNVVY+MQDAG+A++ES+DA+I+DN+FTN +YGIR+SLG G N + +N+F +QYGLYTY GSD P+ +S+GRP +N F NTI GV IKE D+ + DN FTG S EF D++ T W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 7.510e-135 Identity = 226/441 (51.25%), Postives = 284/441 (64.40%), Query Frame = 1
Query: 112 GRMYLEDGGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSD--GRPGENSFYDNTISNTETGVKIKEADNTIITDNTFTGTSLLE---FNDATGTAWSSNTFKDANDDLCYK 1413
G+ Y+ GGC T+TD+Y ++ G GP+++LD +D+++ S TG WLL ++ V GS+ G GGD LRIQSTGS D++E+RGHGGSL F T VTSWDT +K +YK RSF+ CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA GGE A GIFLHRSSD CEV+ N VYDM+DAG+AI+ES A IHDNTFTNVKYGIR+S+G N V +N F EC QYG+YTYQG+D PEAS D G +N+F+ NT+ E GVKI++A+ + TDN F S E F D W++N D D+C K
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLK 827
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 385 bits (988), Expect = 6.200e-126 Identity = 226/470 (48.09%), Postives = 281/470 (59.79%), Query Frame = 1
Query: 25 SSPTPVMTIPDECTGTKASIRWASGTGLNGRMYLED------GGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITDNTF-TGTS---LLEFNDATGTAWSSNTFKDAND 1398
+SP ++ PD + + SIR+A G R+YLE GGC T+ ++ SR K P+Y +D D + S T TG WLLT EL+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP ED DGRS+++ VSE + DETCEG KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI + GG E +AGIFLHRSSD V N V+D DAGLA+LESF+AD+ +NTF N KYG+R+S+G +N +N+ S+Y YTY GSD P+ S GR N F N+ S E +KIKEAD T DN F G + ++ F+DA + NT D D
Sbjct: 32 ASPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDV-SETE-TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGD 489
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 384 bits (986), Expect = 1.090e-125 Identity = 213/423 (50.35%), Postives = 258/423 (60.99%), Query Frame = 1
Query: 79 SIRWASGTGLNGRMYLED-------GGCGTMTDLYMSRVESDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPKKSPQEDYKDGRSFLNCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEHAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPEASSDGRPGENSFYDNTISNTETGVKIKEADNTIITDNTF 1320
SIR+A G R+YLE GGC T+ ++ SR KGP+Y +D D + TS TG WLLT EL+V G G+ GGD DELR+ ST T F +R HGGSL F T V SWDT SP ED DGRS+++ +SE + DETCEG KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI + GG E +AGIFLHRSSD V N V+D DAGLA+LESF+AD+ +NTF N KYG+R S+G +N +N ++Y Y+Y G+D P+ S GR N F N+ S E +KIKEAD T DN F
Sbjct: 45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNV--STSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig930.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig930.11.1 >prot_A-nodosum_M_contig930.11.1 ID=prot_A-nodosum_M_contig930.11.1|Name=mRNA_A-nodosum_M_contig930.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=470bp MPVSSPTPVMTIPDECTGTKASIRWASGTGLNGRMYLEDGGCGTMTDLYMback to top mRNA from alignment at A-nodosum_M_contig930:248614..251283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig930.11.1 ID=mRNA_A-nodosum_M_contig930.11.1|Name=mRNA_A-nodosum_M_contig930.11.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2670bp|location=Sequence derived from alignment at A-nodosum_M_contig930:248614..251283- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig930:248614..251283- >mRNA_A-nodosum_M_contig930.11.1 ID=mRNA_A-nodosum_M_contig930.11.1|Name=mRNA_A-nodosum_M_contig930.11.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at A-nodosum_M_contig930:248614..251283- (Ascophyllum nodosum dioecious)back to top |