mRNA_A-nodosum_M_contig9094.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 75.1 bits (183), Expect = 4.870e-14 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 RQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 219
RQ+D++ A+L ++ EE+++E P+G+ D +V RL+ +YGL AG +W+KK +L GF R+ ADPCV+
Sbjct: 963 RQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVY 1035
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: L8H8A7_ACACA (GagPol, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8A7_ACACA) HSP 1 Score: 70.9 bits (172), Expect = 4.770e-13 Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 4 QLDVEMAFLEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKH 231
Q+DV+ AFL AD++EE+Y++ P+G+ D P+ V RLQK++YGL A L W++ L GF ++ DPC++ R H
Sbjct: 90 QMDVDNAFLNADLSEEIYMQQPEGFEDQDHPDYVCRLQKSLYGLKQAPLEWNQTINAYLKKHGFWPTRLDPCIYVRVH 167
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A7M7QCF8_NASVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7QCF8_NASVI) HSP 1 Score: 68.2 bits (165), Expect = 1.160e-12 Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 7 LDVEMAFLEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 219
LDVE AFL+ ++ E++Y++ P+GY D P+ V RL+KA+YGL +G +W+ K G L G +R + DPC++
Sbjct: 10 LDVETAFLQGELEEQVYIQQPEGYVDPHHPDLVCRLKKAIYGLKQSGRVWNVKLGSILNEMGLQRCEYDPCLY 82
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A6A3YME3_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YME3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.240e-12 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 7 LDVEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRK 228
+DV+ AFL D EE+Y++ PDG+ +D+P + L +A+YG A W+ K L+A+GF RS ADPCV+ R+
Sbjct: 851 VDVDTAFLYGDAEEEIYMDQPDGFVDQDNPTKKCLLGQALYGTKQAARQWNNKLNQHLVAQGFRRSDADPCVYVRR 926
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A535FQJ1_9CHLR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535FQJ1_9CHLR) HSP 1 Score: 68.2 bits (165), Expect = 7.810e-12 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 4 QLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKH 231
QLD AF +++ EE+YVELPDGY+ + +VGRL +A+YGL + LLW K G L G + + +PC+F H
Sbjct: 80 QLDAVNAFPNSELDEEVYVELPDGYKLT-GKVGRLLRALYGLRRSPLLWQKLLSGALTELGLQAGKEEPCLFLTDH 154
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A2R6QI23_ACTCC (Endonuclease (Fragment) n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QI23_ACTCC) HSP 1 Score: 67.8 bits (164), Expect = 1.770e-11 Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 4 QLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRK 228
Q+DV+ AFL D+TEE+Y++LP G S NQV RL++A+YGL A W KF + GF S D +F R+
Sbjct: 422 QMDVKNAFLNGDLTEEVYMQLPPGSSSSSNQVCRLRRALYGLKQAPRAWYAKFSSTICDLGFSASAYDSALFTRQ 496
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A2R6QB41_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6QB41_9APHY) HSP 1 Score: 64.7 bits (156), Expect = 2.570e-11 Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 4 QLDVEMAFLEADVTEELYVELPDGYRDSPNQVG---RLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 219
Q+DV A+L+ D+ EE+Y++LP+G ++ P + G RL+KA+YGL +G W KK + GFE+ QAD C++
Sbjct: 13 QVDVVGAYLQGDLDEEIYMKLPEGIKE-PGKEGWCWRLKKALYGLKQSGRQWKKKLDEAMAKLGFEKGQADECLY 86
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: Q849B9_ASTYP (Putative gag-pol polyprotein n=1 Tax=Aster yellows phytoplasma TaxID=35779 RepID=Q849B9_ASTYP) HSP 1 Score: 66.2 bits (160), Expect = 4.050e-11 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 4 QLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 219
Q+D AFL+ D+TEE+Y+ P+G PN+V RL+K++YGL A +W+KK L G +S D CV+
Sbjct: 185 QMDAVSAFLQGDLTEEIYMNQPEGSHQEPNKVCRLRKSIYGLKQASRVWNKKLHSCLTKIGLAQSNFDSCVY 256
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A6L2K490_TANCI (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2K490_TANCI) HSP 1 Score: 66.6 bits (161), Expect = 4.430e-11 Identity = 30/74 (40.54%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 4 QLDVEMAFLEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 219
Q+DV+ FL ++EE+Y+E P+G+ D PNQV +L++++YGL A W+K+F E+ GF +++ +PCV+
Sbjct: 127 QMDVKTTFLNGHLSEEVYIEQPEGFVDPKYPNQVCKLKRSIYGLKQASRQWNKRFDDEIKKFGFTQNRDEPCVY 200
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 66.6 bits (161), Expect = 4.510e-11 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 4 QLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVF 219
QLDV+ AFL AD+ E++Y+E P+G + ++V +L KA+YGL AG W K G LI GF+ +D C++
Sbjct: 103 QLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIY 174 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9094.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9094.1.1 >prot_A-nodosum_M_contig9094.1.1 ID=prot_A-nodosum_M_contig9094.1.1|Name=mRNA_A-nodosum_M_contig9094.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=71bp MAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGback to top mRNA from alignment at A-nodosum_M_contig9094:6413..6643+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9094.1.1 ID=mRNA_A-nodosum_M_contig9094.1.1|Name=mRNA_A-nodosum_M_contig9094.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=231bp|location=Sequence derived from alignment at A-nodosum_M_contig9094:6413..6643+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9094:6413..6643+ >mRNA_A-nodosum_M_contig9094.1.1 ID=mRNA_A-nodosum_M_contig9094.1.1|Name=mRNA_A-nodosum_M_contig9094.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=213bp|location=Sequence derived from alignment at A-nodosum_M_contig9094:6413..6643+ (Ascophyllum nodosum dioecious)back to top |