mRNA_A-nodosum_M_contig1117.14.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 176 bits (447), Expect = 3.020e-47 Identity = 87/221 (39.37%), Postives = 136/221 (61.54%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A+ SPEW +W+ A+ EM G + D P G+ +G K VF +K +DG + +YK R VA+ + QI G+ Y E+ +P S+R AL + A+ D + Q+DV+ A+ ++ EE+Y+ P+GY D +V RL+K +YGL +G W+++FD +L S GF + +AD CV++R G++ II V+VDDLL+ SET +D + +L + F +KDLG
Sbjct: 885 AEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLG 1104
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 174 bits (442), Expect = 1.420e-46 Identity = 85/221 (38.46%), Postives = 134/221 (60.63%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A+ SPEWP+W A+K E D G W++ D PK + +G K VF+RK ++G+V KYK R VA+ + QI G+ + E+ +P SIR LA+ + +W+ Q+DV+ A+ D+ EE+Y+ P+G+ D ++ RL+K +YGL +G W++K EL G++R +ADPCV+ + V II V+VDDLL+ + + + + DL+ F + DLG
Sbjct: 913 AQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 1133
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY) HSP 1 Score: 170 bits (430), Expect = 5.400e-45 Identity = 83/221 (37.56%), Postives = 133/221 (60.18%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A+ SPEW +W A+K E D G W++ D PK + +G K VF+RK ++ +V KYK R VA+ + QI G+ + E+ +P SIR LA+ + +W+ Q+DV+ A+ D+ EE+Y+ P+G+ D ++ RL+K +YGL +G W++K EL+ G++R +ADPCV+ + V II V+VDDLL+ + + + + DL+ F + DLG
Sbjct: 718 AQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 938
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 170 bits (430), Expect = 5.750e-45 Identity = 76/221 (34.39%), Postives = 137/221 (61.99%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A+ SPEW W+ A++ E + G W++ + + + ++G++ VF +K + G+V +YK R VA+ F QI G+ Y ++ SP ++R +A+ A+ DW+ RQ+D++ A+ ++ EE+++E P+G+ D +V RL+ +YGL AG +W+KK + +L + GF R+ ADPCV+ GK+ I+ V+VDD+++ +++ + L+ F +KDLG
Sbjct: 861 ARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLG 1080
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT) HSP 1 Score: 161 bits (408), Expect = 1.310e-44 Identity = 83/220 (37.73%), Postives = 135/220 (61.36%), Query Frame = 1
Query: 10 SPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
S E PQW+ A+K E++ + W++VD P G LG + +FKRK+ DG ++KYK R V K +RQ +G+ Y ++ SP +SIRM LA+ A+ + + Q+DV+ AF ++ EE+Y+E P+G+ S N+V +L K++YGL A W +KFD ++ GF+ ++ D CV+ K+ VI+ +YVDD+L++ + + L+S F +KD+G
Sbjct: 39 SSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQWHQKFDQAMMESGFKINECDKCVYV-KNTTHGYVILCLYVDDMLIIGSNDKMIRSTKDMLKSKFDMKDMG 257
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5N6PND6_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PND6_9ASTR) HSP 1 Score: 159 bits (403), Expect = 6.150e-44 Identity = 84/224 (37.50%), Postives = 137/224 (61.16%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A S E PQW+ A+K E+D + W++VD P G LG + +FKRK+ DG ++KYK R V K FRQ +G+ Y ++ SP +SIR+ LA+ AL + + Q+DV+ AF D+ EE+ +E P+G+ +P Q G+ L K++YGL A W +KFD +++ GF+ ++ D CV+ K+ + VI+ +YVDD++++ + + L++ F +KD+G
Sbjct: 77 AVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEILMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTMRGYVILCLYVDDMVIVGSDDKMIKSTKDMLKTRFDMKDMG 298
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A2I0J8X0_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J8X0_PUNGR) HSP 1 Score: 159 bits (401), Expect = 6.910e-44 Identity = 82/223 (36.77%), Postives = 132/223 (59.19%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRD--SPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A + P+ +W A++ EM+ VW +VD P+G ++G K VFK+K DG V +K R VAK FRQ+ G+ Y E+ SP SIR+ LA+ A D++ Q+DV+ AF ++ E++Y+ P+G+ D S +V +LQ+++YGL A W+ +FD + GF +++ +PCV++ K G +V+ +V+YVDD+L++ L F +KDLG
Sbjct: 78 AVIGPDSEKWLVAMRSEMESMYTNQVWTLVDPPEGAKLIGYKWVFKKKTDMDGNVITFKRRLVAKGFRQVHGVDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFVDPHSAEKVCKLQRSIYGLKQASRSWNFRFDDAIKEFGFNKNEDEPCVYK-KVSGSIVIFLVLYVDDILLIGNDIPSLQSVKTWLGRCFSMKDLG 299
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5N6P044_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P044_9ASTR) HSP 1 Score: 162 bits (411), Expect = 1.220e-43 Identity = 85/224 (37.95%), Postives = 138/224 (61.61%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A S E PQW+ A+K E+D + W++VD P G LG + +FKRK+ DG ++KYK R V K FRQ +G+ Y ++ SP +SIR+ LA+ AL + + Q+DV+ +F D+ EE+Y+E P+G+ +P Q G+ L K++YGL A W +KFD +++ GF+ ++ D CV+ K+ + VI+ +YVDD+L++ + + L++ F +KD+G
Sbjct: 77 AVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTSFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTMRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 298
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5N6MBP8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBP8_9ASTR) HSP 1 Score: 164 bits (414), Expect = 1.980e-43 Identity = 86/224 (38.39%), Postives = 138/224 (61.61%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A S E PQW+ A+K E+D + W++VD P G LG + +FKRK+ DG ++KYK R V K FRQ +G+ Y ++ SP +SIR+ LA+ AL + + Q+DV+ AF D+ EE+Y+E P+G+ +P Q G+ L K++YGL A W +KFD +++ GF+ ++ D CV+ K+ + VI+ +YVDD+L++ + + L++ F +KD+G
Sbjct: 142 AVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 363
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5N6NFL8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFL8_9ASTR) HSP 1 Score: 162 bits (409), Expect = 3.110e-43 Identity = 84/223 (37.67%), Postives = 136/223 (60.99%), Query Frame = 1
Query: 1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYR--DSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 663
A S E PQW+ A+K E+D + W++VD P G LG + +FKRK+ DG ++KYK R V K FRQ +G+ Y ++ SP +SIR+ LA+ AL + + Q+DV+ AF D+ EE+Y+E P+G+ +V +L K++YGL A W +KFD +++ GF+ ++ D CV+ K+ + VI+ +YVDD+L++ + + L++ F +KD+G
Sbjct: 142 AVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSALGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 363 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1117.14.1 >prot_A-nodosum_M_contig1117.14.1 ID=prot_A-nodosum_M_contig1117.14.1|Name=mRNA_A-nodosum_M_contig1117.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=221bp AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGback to top mRNA from alignment at A-nodosum_M_contig1117:226175..226837+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1117.14.1 ID=mRNA_A-nodosum_M_contig1117.14.1|Name=mRNA_A-nodosum_M_contig1117.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=663bp|location=Sequence derived from alignment at A-nodosum_M_contig1117:226175..226837+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1117:226175..226837+ >mRNA_A-nodosum_M_contig1117.14.1 ID=mRNA_A-nodosum_M_contig1117.14.1|Name=mRNA_A-nodosum_M_contig1117.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=663bp|location=Sequence derived from alignment at A-nodosum_M_contig1117:226175..226837+ (Ascophyllum nodosum dioecious)back to top |