prot_A-nodosum_M_contig1117.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1117.14.1
Unique Nameprot_A-nodosum_M_contig1117.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length221
Homology
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 176 bits (447), Expect = 3.020e-47
Identity = 87/221 (39.37%), Postives = 136/221 (61.54%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A+ SPEW +W+ A+  EM      G +   D P G+  +G K VF +K  +DG + +YK R VA+ + QI G+ Y E+ +P     S+R AL + A+ D +  Q+DV+ A+   ++ EE+Y+  P+GY D   +V RL+K +YGL  +G  W+++FD +L S GF + +AD CV++R   G++  II V+VDDLL+ SET +D  +   +L + F +KDLG
Sbjct:  885 AEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLG 1104          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 174 bits (442), Expect = 1.420e-46
Identity = 85/221 (38.46%), Postives = 134/221 (60.63%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A+ SPEWP+W  A+K E D     G W++ D PK +  +G K VF+RK  ++G+V KYK R VA+ + QI G+ + E+ +P     SIR  LA+  + +W+  Q+DV+ A+   D+ EE+Y+  P+G+ D   ++ RL+K +YGL  +G  W++K   EL   G++R +ADPCV+  +     V II V+VDDLL+ + + +   +   DL+  F + DLG
Sbjct:  913 AQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 1133          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY)

HSP 1 Score: 170 bits (430), Expect = 5.400e-45
Identity = 83/221 (37.56%), Postives = 133/221 (60.18%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A+ SPEW +W  A+K E D     G W++ D PK +  +G K VF+RK  ++ +V KYK R VA+ + QI G+ + E+ +P     SIR  LA+  + +W+  Q+DV+ A+   D+ EE+Y+  P+G+ D   ++ RL+K +YGL  +G  W++K   EL+  G++R +ADPCV+  +     V II V+VDDLL+ + + +   +   DL+  F + DLG
Sbjct:  718 AQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLG 938          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 170 bits (430), Expect = 5.750e-45
Identity = 76/221 (34.39%), Postives = 137/221 (61.99%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A+ SPEW  W+ A++ E    +  G W++ +  + + ++G++ VF +K  + G+V +YK R VA+ F QI G+ Y ++ SP     ++R  +A+ A+ DW+ RQ+D++ A+   ++ EE+++E P+G+ D   +V RL+  +YGL  AG +W+KK + +L + GF R+ ADPCV+     GK+  I+ V+VDD+++  +++      +  L+  F +KDLG
Sbjct:  861 ARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLG 1080          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT)

HSP 1 Score: 161 bits (408), Expect = 1.310e-44
Identity = 83/220 (37.73%), Postives = 135/220 (61.36%), Query Frame = 0
Query:    4 SPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            S E PQW+ A+K E++  +    W++VD P G   LG + +FKRK+  DG ++KYK R V K +RQ +G+ Y ++ SP    +SIRM LA+ A+ + +  Q+DV+ AF   ++ EE+Y+E P+G+  S   N+V +L K++YGL  A   W +KFD  ++  GF+ ++ D CV+  K+     VI+ +YVDD+L++    +      + L+S F +KD+G
Sbjct:   39 SSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQWHQKFDQAMMESGFKINECDKCVYV-KNTTHGYVILCLYVDDMLIIGSNDKMIRSTKDMLKSKFDMKDMG 257          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A2P6RCF4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RCF4_ROSCH)

HSP 1 Score: 168 bits (426), Expect = 1.930e-44
Identity = 84/216 (38.89%), Postives = 134/216 (62.04%), Query Frame = 0
Query:    8 PQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDS--PNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            P+W  A+  E+D  + +G W++V  PK K ++G+K ++K K   DG + +YK R VA+ F Q KG+ Y E+ SP    S++R+ +A+ A+  W+ RQLDV+ AF   D+ EE+Y+  P G+ DS  P+ V  L+K++YGL  A   W++KF   L + GF+ S  DP +F  KH  K V+I+++YVDD+++    K+     + +L  +F +KDLG
Sbjct:  643 PEWDEAMYEEIDALLKQGTWELVPLPKAKNIVGSKWIYKIKKNPDGSISRYKARLVAQGFSQEKGLDYDETFSPVVRHSTVRLVVALAAMNKWELRQLDVKNAFLHGDLREEVYMVQPQGFVDSKHPDHVCLLKKSLYGLKQAPRAWNEKFTNFLPALGFQFSHYDPSLFV-KHSEKGVIILLLYVDDIVITGSDKESIEAVITELSEAFDMKDLG 857          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5N6PND6_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PND6_9ASTR)

HSP 1 Score: 159 bits (403), Expect = 6.150e-44
Identity = 84/224 (37.50%), Postives = 137/224 (61.16%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V K FRQ +G+ Y ++ SP    +SIR+ LA+ AL + +  Q+DV+ AF   D+ EE+ +E P+G+  +P Q G+   L K++YGL  A   W +KFD  +++ GF+ ++ D CV+  K+  +  VI+ +YVDD++++    +      + L++ F +KD+G
Sbjct:   77 AVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEILMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTMRGYVILCLYVDDMVIVGSDDKMIKSTKDMLKTRFDMKDMG 298          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A2I0J8X0_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0J8X0_PUNGR)

HSP 1 Score: 159 bits (401), Expect = 6.910e-44
Identity = 82/223 (36.77%), Postives = 132/223 (59.19%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRD--SPNQVGRLQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A + P+  +W  A++ EM+      VW +VD P+G  ++G K VFK+K   DG V  +K R VAK FRQ+ G+ Y E+ SP     SIR+ LA+ A  D++  Q+DV+ AF   ++ E++Y+  P+G+ D  S  +V +LQ+++YGL  A   W+ +FD  +   GF +++ +PCV++ K  G +V+ +V+YVDD+L++             L   F +KDLG
Sbjct:   78 AVIGPDSEKWLVAMRSEMESMYTNQVWTLVDPPEGAKLIGYKWVFKKKTDMDGNVITFKRRLVAKGFRQVHGVDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFVDPHSAEKVCKLQRSIYGLKQASRSWNFRFDDAIKEFGFNKNEDEPCVYK-KVSGSIVIFLVLYVDDILLIGNDIPSLQSVKTWLGRCFSMKDLG 299          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5N6P044_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P044_9ASTR)

HSP 1 Score: 162 bits (411), Expect = 1.220e-43
Identity = 85/224 (37.95%), Postives = 138/224 (61.61%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V K FRQ +G+ Y ++ SP    +SIR+ LA+ AL + +  Q+DV+ +F   D+ EE+Y+E P+G+  +P Q G+   L K++YGL  A   W +KFD  +++ GF+ ++ D CV+  K+  +  VI+ +YVDD+L++    +      + L++ F +KD+G
Sbjct:   77 AVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTSFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTMRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 298          
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Match: A0A5N6MBP8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBP8_9ASTR)

HSP 1 Score: 164 bits (414), Expect = 1.980e-43
Identity = 86/224 (38.39%), Postives = 138/224 (61.61%), Query Frame = 0
Query:    1 AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWKGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLG 221
            A  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V K FRQ +G+ Y ++ SP    +SIR+ LA+ AL + +  Q+DV+ AF   D+ EE+Y+E P+G+  +P Q G+   L K++YGL  A   W +KFD  +++ GF+ ++ D CV+  K+  +  VI+ +YVDD+L++    +      + L++ F +KD+G
Sbjct:  142 AVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYV-KNTTRGYVILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMG 363          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1117.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A284QR88_ARMOS3.020e-4739.37Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A401GYH9_9APHY1.420e-4638.46Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401H727_9APHY5.400e-4537.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A0C3AKI0_9AGAM5.750e-4534.39Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A5R9QKQ6_9BACT1.310e-4437.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6RCF4_ROSCH1.930e-4438.89Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A5N6PND6_9ASTR6.150e-4437.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2I0J8X0_PUNGR6.910e-4436.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6P044_9ASTR1.220e-4337.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6MBP8_9ASTR1.980e-4338.39Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 217..221
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 8..221
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 26..221
e-value: 9.1E-44
score: 149.9
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 103..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1117contigA-nodosum_M_contig1117:226175..226837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1117.14.1mRNA_A-nodosum_M_contig1117.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1117 226175..226837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1117.14.1 ID=prot_A-nodosum_M_contig1117.14.1|Name=mRNA_A-nodosum_M_contig1117.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=221bp
AKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVG
QDGRVEKYKCRFVAKSFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDW
KGRQLDVEMAFFEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGL
LWSKKFDGELISKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSET
KQDEHQALEDLRSSFPIKDLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf