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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 29908.U7PL37 |
| PFAMs | Fungal_trans,Zn_clus |
| Model size | 1579 |
| Max annot lvl | 4751|Fungi |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Evalue | 0.000453 |
| EggNOG OGs | 28KR8@1|root,2QT79@2759|Eukaryota,39CD3@33154|Opisthokonta,3NWDE@4751|Fungi,3QS81@4890|Ascomycota,213AM@147550|Sordariomycetes,3UQ1E@5151|Ophiostomatales |
| Description | GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain |
| Cds size | 879 |
| COG category | B |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866455.132083-UTR-A-nodosum_M_contig107:543553..543630 | 1680866455.132083-UTR-A-nodosum_M_contig107:543553..543630 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig107 543554..543630 + |
| 1680866455.2143908-UTR-A-nodosum_M_contig107:550412..551035 | 1680866455.2143908-UTR-A-nodosum_M_contig107:550412..551035 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig107 550413..551035 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866455.1433423-CDS-A-nodosum_M_contig107:543630..543701 | 1680866455.1433423-CDS-A-nodosum_M_contig107:543630..543701 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig107 543631..543701 + |
| 1680866455.1543853-CDS-A-nodosum_M_contig107:546233..546317 | 1680866455.1543853-CDS-A-nodosum_M_contig107:546233..546317 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig107 546234..546317 + |
| 1680866455.1717176-CDS-A-nodosum_M_contig107:546550..546707 | 1680866455.1717176-CDS-A-nodosum_M_contig107:546550..546707 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig107 546551..546707 + |
| 1680866455.1820443-CDS-A-nodosum_M_contig107:548277..548397 | 1680866455.1820443-CDS-A-nodosum_M_contig107:548277..548397 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig107 548278..548397 + |
| 1680866455.190367-CDS-A-nodosum_M_contig107:549593..549732 | 1680866455.190367-CDS-A-nodosum_M_contig107:549593..549732 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig107 549594..549732 + |
| 1680866455.200337-CDS-A-nodosum_M_contig107:550104..550412 | 1680866455.200337-CDS-A-nodosum_M_contig107:550104..550412 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig107 550105..550412 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig107.16.1 >prot_A-nodosum_M_contig107.16.1 ID=prot_A-nodosum_M_contig107.16.1|Name=mRNA_A-nodosum_M_contig107.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=293bp
MEIQTTHAAADFRKSCDFCTSRKRRCDRVGVSPCTLCSEKGASCTFRQKG RRGPKPKVHYRNLLAPAEAASASAGVGNGDGPEKGVGPNHLEVPKIPNTR PAPDVSLESKIEMLERRSVEVDKQQEGVLAALESGGSFRGIEGKADLVDT LKSFRKEKEYLLQLQAQLQEERLILLRMGSNTSKRLLPNPAIARDSEEAK RARVPSSVPPLPLKMEQSIARSSSFAAAAAASTPHAVDVHVSPRKRRTND DDDEERETHSSGPLCSGEPGETRASRANRTRSPSGGAWAIEV* back to topmRNA from alignment at A-nodosum_M_contig107:543554..551035+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig107.16.1 ID=mRNA_A-nodosum_M_contig107.16.1|Name=mRNA_A-nodosum_M_contig107.16.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7482bp|location=Sequence derived from alignment at A-nodosum_M_contig107:543554..551035+ (Ascophyllum nodosum dioecious) AAGGTGGTCAAGAGTATCGTTATCGTGAAGGAACGGCGAGGTCGGCAAGC
GCGCCCCACCTGCAGCAGTGGCGAGACATGGAGATCCAGACGACTCATGC
GGCGGCAGACTTCCGGAAGAGCTGCGATTTTTGCACCTCTAGGAAGAGGT
GGGTCATCTATTAAAAAACACATAACAAACGTTTTGGGTACAGTAATGGC
CGTACATACATAGATAGAATCGCCAATGTTGGGTTCCCGGCCGATTGCTG
ATCGAACGAGCTTGTGTCTCCCCTCCCCCCCCCCCGCTTATCACCTCTCC
CCTCAAACCACCGTTACCCTAACCCTAACCCTGATCCTAACCGTAACCCT
AACCGTGACCCTAACCCTCCTCGGGCGTGTTAAGCAAGTAATGTCTCCAA
GAGCATGGCCGCTGTACCGCAGATGTTACAGCCGCTGTACCGCGTTCAGC
TGCAAAAAAAGAATCCTGTTCACGTATCGCCAGGAAAATAATACAACTCG
AGCACACGTAGTAGCATTTCGTCGTAAGTGTTGAGTCCGTATCGGAGGCG
CAGGCAGCATTGTCGTTAGCATTGTCAGTGTCATAGTCGTTGAGGAAGCC
GCCGCAATAGTGAAGGTAGCACAACGCCCGCTAAATCGATCCACTGGCAA
CCAGAACATGACATGAGTGAGCACCAGATTCAGCCTGGGTATGGAGATGA
GCAGGCTGACGCGGGACGGGTTTACCGAACCCGTCTCGCGAGACCAAGTA
TTCAGGCGTGAACGCGGACAGGGAAATATTCATTTCCCCTGTTCAGCTGA
CCACGTGCAGGATTGGCAACCTTTTACCCGGTTGATCCATACTCTTGCTA
TATGTGTGACCATACATACATACATCACCCCACTATTACTAAACCTGCTG
CTGGAGGTAGCTTATATACCATCGGTCGCCACGGTGGTTCAGTTGGTGAC
GTTGAAACCTTCTGACGTTGGGACGTGAGTTCGAATCTCGGTGCAGTCAC
ACGAACTGAGATTTTTCCTCACTATAATAAATAAATAAATAAAATATAAT
GCCCAACAAGTGGAGAACGATTAATTCGTGTGTACACAAAATTCGACTTA
CACGGTCGACGAGGGAAAGGAACGGCTGAATCCTTCTCACGAAAAATTGA
GGAAAGCACCGCAGAAAGAAGGTGGATGAGAAATCCTGCGTGACCTTCCT
CCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACTTCCACAAGCCT
GACGTCCAGAATAAATGGGATGACAACACACACATAGACACATCTCTTCA
AAGCCTTTGGGCTATAAGACGCACGGAGTACCTCTCAGCATGGGTGCCGT
TCTGTCGAGAAAGGCTATATAAGACACGCTTGGCGGCGAGATGAGGAAGG
AAGGAAGGAAGTCTGACCGAAGGTTGTCGATTACGTGGTCGTGCTATTTT
TGCACTGTTGCAAAGCTCTAACGCTACACAGCACTAGGCTATCTGTCAGT
CGGCGTGTTCCTCCGTCGAGATAAAGTCGCCCGCAGAGATATGGCACGTA
CCGTCAGGACGGCGAATGAATCGGTGCCCGTACTGTTCTTGCCCCCCCCA
CCCCCAACTCATTTAGGGCAAATCGCGCGCAAGCCGCTTTTGACTCGACA
ACTCCAAACCACGCCGAGCTCTGTGCGTACAGTATCGGATAATTTGATCC
GTTGGATTCCCCGGATTGCTGTGAGCTGATAAGTCCCATGAGGCACGccc
cCCCCCCCCCTCCCCCAAAGCCCTCTTCCCCACCCCCGAACACTCAGCCG
CGCGTTACACCAAGCGAAGCCCTCTTCCTGGGCAACACCCCCACGTGCGT
GGCTGAAAAGCCGCATGTACAAAGCAGAGCACCTTGTGTATAGCCGCGTC
CAATCGTTTGGATTCAGCTGCCATCGTCTCGCTGGCAGACAGGGCATGGT
TGAAGTGGCTGTCGCTCTATCGTCGCGTGCTCATGAGGCCCTAAAGCTGC
TTTTGGTGCGAGAAACACGATCGCCTTGTACAGTACAGTAGGTCGCAGCG
TCGCAAACGGCGTTGCACGAGCGGGCACAGGAGGAGGGTGTTCCTTGTTG
GGCCATGAATTTACTTCCATTGTTTTTGCAGCGGCGATGCAGCGTAGTGT
GACGCGTTGCAAACTTAAAGCAGGTTTTCTGTTCGGACGTCTTCGCACGT
TATGGACAAGGGAGGGGAGGTCGATCAATGTTTCCCCCTACTGTGCCCGG
GTTCTGAGCAAACCACCTTGCAGCTCGAACACGGCAAGCGATATTGTCTT
ACGGCGTGCACTCCAGGGTATCGTAGGGGCGCGCCCCGTGAGCGATTTGT
CTGCAAAACGATGGTTTCGTTCTTTCCGTGGTTGTGTCGCCGCCGTTAAT
GGGCCCAACACTGGCACTACTATTTTTTTGTGCGGAGGCATTTTTACTCT
GATCGCCCCCTCTAGCCCGAACCACTTTTAAAACATGATTTATGGACACA
AGTCGCGTCTTGGCGTGTCTGCTTGGCTTGTGGCAGCTCACTAATGAAGA
ACATTGCTCACCGCCGTATGCACAGTACTGCGCGGTGATTGCGTCTCTGA
TCGATCCATGCATTCACCTGCATCTGCCGATCTCGATTTCGACCTACAGT
ACCTGTACCGCCCGTGCCGCGTGCCTCCAGGCGTTGCGACAGAGTTGGCG
TTAGCCCTTGCACGCTGTGCTCGGAGAAAGGAGCGTCTTGCACCTTTCGC
CAGAAGGGTAGGAGGTGAGAGAGAAAAATTCATCGTACCCCAACAGCTGC
CGCGTCTTTTCTCGGTCTCCCGCTCCCTATTTATTGCTTCTCTGGCGGGG
GGCGAAAGCCATCGAGCCTCCCTTTGACCACGTGTCGCCTCGCCTTCTCC
TTCTCCCTGCTTTATCCCCCCCCCCCCTCCCTCCTTTATTTTCTTGCCTT
TGCGCCATGCGGAACTCCCACGCTCTCGGCCCTCACACCCTGTACAGGGG
GCCTAAACCCAAGGTGCACTACCGGAACCTCTTGGCACCGGCGGAGGCGG
CCTCCGCCTCCGCCGGCGTGGGCAACGGAGACGGCCCAGAGAAGGGTGTT
GGTCCGAACCATCTGGAAGTACCCAAGATTCCGAACACCCGCCCAGCACC
TGACGTGAGTGGTAAATCTACATACTACTTCGCATATACTATGAATCAGG
TGCCTCTCGGCGATTGTGGTGGTATATAGCTCTTGCGTTTTTCTTTTATA
GGCCTACATAGACCACCGGAAGAAGCACAAAGCACTCAGCTATCTGACCG
ATGGCTGTGATTCGCTCGCAAAAGTGTACAACGAGTGCGGTGGGCGGCAG
TCGAGGAGTTGAACTAGGGTCGCTGTTGCGTCGCACAAGACTTCGTTTAC
CAGCTAAAAAAACGATTTCTCCATCCCAGCGCTGTCCCGAGCGCTATTTC
CAGTGACAATGTCTACTTTACTCCCACATACGACTCTGCCTGCAATTTGG
CGAGCTAAGGGACTTCGTGTGGCGTGAGTGAACTGTATTTGAGCGGCTGA
GACAGGCTTTTGCACCAAATGGTGCACATCCGATGAGCAAACACCGCGAC
CGCCGTCCTCAGCGCACCACAAAACGTTTCGGCCATCGCACCGATGAAAC
TCGTTCACAATACCCTTGGCTATAATATCTAGAAGAGTTATACTGTGCGT
GGACGTGGCCTCACGGACAGCGAGCTGGGGAAGCTCTGTTGGGGAGAGGA
GCAAAGCACCATTCGAGAAACCAGCCGAGAATCAATGTTGTTTTTACAAT
ACGAGAATGAACATAGGTTGTTTTCGAGGTAGGGATGAGCTCAATGCGTG
CGCGGATTCTCCCCGGTCAACCACTACAGTTAAGGGCGCATGGTGGAGCT
AATCTGTAGTCTGTGATACTCCAAATAGGCTGCCCACCCTCTGTTCTTGG
CACGATTAGTAAAGATGCGCACGCTACGCTGCGATATGGGGGAGGCCGCA
AGCGTGTTTTAGTGTGTTTATGGTTAACGCCAACGGCGTGGCGAAATGGA
TCGAGCAGACCGTTTTTTATAAGCGGTTTCTGTAACGTCTGTGGTTCATT
TTGTACCAATCCAGCAGCACCCTGTTTCACGCGGCGCAACTGACCCTTAG
TTCAGCCAAGTCACGCTTGAGGCACAATAGTGCCCCGGTTCGCAAGACAG
ATGTCAGTATGGCCACGACTGGCAGCTTTCTTCTGGTTGCTCTGGTGCAC
ATCCGGCCTAGATACAATCCACAAGTACCGCGGCTCGTTTTTTTCGGTTA
CAGGCCGTGCACCGGACACCGGGCCGAGGCAATCATTGCTTGGCGGCCTC
TCTTGGCTGGGACGTATGAAACCTATTGCTGCTGCTATTAAGAGTTCGTC
TTTCTGAGATCATGATTTCTTCATCACCTATCACAAGAGATTCCCGGTCA
GATTAGATAGATAGATAGATAGACGTCGTGAGAAATTGTGGATAGGTAAT
TTGAAATTGCAGCAGTTCTTTTTGGCCAAGTTTTTCGCCAGGTAAAAATA
AATAAATTGAGTATTATGTTTCAGTCAACGCTCTTGGCACGGCCGTTGGG
CAAATAATATTAACAATGTTCCTGTCAATGGTTTTGGCACGCCGTTCGGC
AAACCGTCGAGTGTGCGTGTTTGGCCCCCCGGTTGATATCTCTGTGCTTG
CATCGCTCGCTTGAATCCCTCCAGGTGTCGTTGGAGTCGAAAATCGAAAT
GCTAGAGAGGAGAAGCGTGGAGGTCGATAAACAGCAGGAGGGGGTGCTAG
CTGCGTTGGAATCCGGCGGTTCTTTCCGAGGCATCGAGGGCAAGGTGGGT
ATCGATTTGATTCCGACGTCCCCCCCCCCCCCCCCCCAATAGATaAAAAC
AAAACAAAAAACGCAGCACAGCAGAAGAAGAAATACATTTGTTAATGTTA
ATACAGCTCTATAGCCTATACCAGTAGCTCTATTAATAGTACAGTTGTGC
TGACAAGGGAAGATGTTCTCGACCAGATAGCATTCCCATCGAGAGCACGG
TTGGCGAAACGAGCTTTGGCCTAGCGGTGCTGTCACGACTTTGTCCATCT
CCCGGTGCTGGCCCTGTCCGAGGGGCGGCCTAGTGCAGGGGTCAGCTCTA
AGAGTGTCCCTACATGCTGTTAAGGTTCTCGCGGGACTGTAGCTTTCAGG
TTTGGTTTGGCTTACACTTTTGGCAGGCGTTTGGAGCCCACCCTGGTGTT
AATAATAATAGTGATACATAGTGATATAGTGATACATAGTGATATAGTGT
AGTGATGTAGTGATGTAGTGATATAGTGATATAGTTATATCGTATTATAG
TGGTGTAGTGATACAGTGACGTATTCGTCGGGTTGTAATTGTGACATTTG
TTATTGGGAAGATGGATTGTATGAAATGGCTTATTAATAGTGTAACAAAA
CATTTCCGTCAGACTTGAGATTCTGCGGCTAGACCACGGTTGACCCCGGT
TAGGCCCCCAGAGTAGAGGTCTACAGAAACATGACAAGTCTCCGTAAAGC
CAACCCAACAGAAAAGAGCGTTTCAAGGGTTCGAGGCCTACGCTAGTTGC
TCTCGCCGTGGTGCAAATGGTATACTGTACTACACTATACTGTAACTATA
CTATACTGTACTATACTTGTATGTCGTAACGTCCTCGTGACGCCCTCGTA
TTCTTGTTCCTGGCACACTTGTCTTGATTATCTTGATCGTCTTGATTGCG
ATTGTCTTGATTGTGTTGATCGAGCAACAAGATTGACAAGGATGCCGCGG
TTAGAAACGGTCGAGCGCCCGACTCACGGCATCCTCGAAAAAAAAAAGAA
GCGAATCCGATGTATATATGTAGAGCCTATATATATAATACAGTATACGA
TGTTTGCTGTCGGTTCTGCGGCCTTAAAAGAGTGGCCTCTTACTGTAGAA
TCAGTTGCATTGCTGCCCTTCGCTAGGCCTGTTAATTTTCTCCAACACCT
TCCCACGTAAAACACACACACACACTTTCACACCAAACAGGCTGACCTCG
TGGACACGCTCAAGAGTTTCCGGAAGGAAAAGGAATACTTGCTGCAGCTG
CAGGCACAGCTCCAAGAGGAGAGGCTGATACTCCTGAGGATGGGGAGCAA
CACCAGCAAGCGCCTCCTGCCAAACCCCGGTGAGAGCTCCTTGGGCTCTG
TTGTACTGGACAAAGGCCGTACAACACGATGGCTGATGGCTTGACAACCC
TCATATACATACATATGAGACCCGAAATCCAACAGGAAACCGCGTTCGTG
GCGGCTTGGTTGCAAGCCAGGTGTGCCCTGCTTGGTAGCGCCTCGCTCTG
TGGGGGTTTGCAAACGTTGATCCTCGTTTGAACTCCAAAGGCGCGCGCGA
AGGTCTTGAGAAACGCGGCGCACCAGCGCGCCCGTTTCAGTCTTTTGAGC
AAATACGTTGGCGCTCGCGTTTTTTCCTTCCTTCTTTTTTTTCCCCCTTC
TTTTCTTTCTTTCCATCTTTCTATCTTTCTCGATCGCTGTACGCTCTTCA
GCAATCGCGCGTGATTCGGAGGAGGCCAAACGAGCGCGGGTACCCTCAAG
CGTACCTCCGCTACCATTGAAGATGGAGCAGAGCATTGCGCGCAGTTCTT
CTTTTGCTGCTGCTGCTGCCGCTTCCACCCCGCACGCCGTGGATGTCCAT
GTGTCGCCGAGGAAACGGAGGACCAACGACGATGACGACGAGGAAAGAGA
GACACATTCTTCCGGTCCCTTGTGTTCGGGGGAGCCTGGTGAAACTAGAG
CCTCTCGGGCCAACCGCACCCGTTCACCATCGGGCGGTGCTTGGGCTATC
GAGGTCTAATTGGCCCATCTACCCGATAACAGCCGCGCGATGAGCTGTTG
AGACTATGCGCTCAACGCGCAACCGAGGATTGAAGGTGTCCACTTAAATC
AGAAGAAATAAGATCGCCGGCGAAGCCACGCGCTTCTGTGGAGGGACTTG
TGGTGTGTGTGATCGCATGCATACGTCCTCTTGGGCGCTTGCCACGTCGA
CGTAGTCGGGCCGGGGACCGTCTCATCGGCTGACGTTTGCACCTAGCCAG
GGGGATAAAATCCGCTCTCACTCCAAAGACCGCCAGCAGGAAGCGGATAC
AAGCATCGATGGTGCCACGTGATTCAAGGCGGATCTTGCGGTTTCGTCTC
TCCCCCCTTGCTATCAATAGCTATAATATCAATAATGGCTACTTGTTCTT
GTATGGTCGCACGTATGGCAACTTCTCGCCGCGCGGGTTAGGATTAGTTA
CAGCCGTAGATGGTTTGGACGTCGTCTCGATCGAGGGTTACAATGCGATA
TTGTGAGGGGTGCGCTTGGGGTGACTTGGCTTGTCGCTTGAGTGACTGGT
GCTCGGACCGGTGGGGGGTGGGAGATGATGGTGTTCTTTGGAGTTACTGT
AACCCCAGCTGGTGCAAGATTGCAGCGTTCGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig107:543554..551035+ >mRNA_A-nodosum_M_contig107.16.1 ID=mRNA_A-nodosum_M_contig107.16.1|Name=mRNA_A-nodosum_M_contig107.16.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=879bp|location=Sequence derived from alignment at A-nodosum_M_contig107:543554..551035+ (Ascophyllum nodosum dioecious) ATGGAGATCCAGACGACTCATGCGGCGGCAGACTTCCGGAAGAGCTGCGA TTTTTGCACCTCTAGGAAGAGGCGTTGCGACAGAGTTGGCGTTAGCCCTT GCACGCTGTGCTCGGAGAAAGGAGCGTCTTGCACCTTTCGCCAGAAGGGT AGGAGGGGGCCTAAACCCAAGGTGCACTACCGGAACCTCTTGGCACCGGC GGAGGCGGCCTCCGCCTCCGCCGGCGTGGGCAACGGAGACGGCCCAGAGA AGGGTGTTGGTCCGAACCATCTGGAAGTACCCAAGATTCCGAACACCCGC CCAGCACCTGACGTGTCGTTGGAGTCGAAAATCGAAATGCTAGAGAGGAG AAGCGTGGAGGTCGATAAACAGCAGGAGGGGGTGCTAGCTGCGTTGGAAT CCGGCGGTTCTTTCCGAGGCATCGAGGGCAAGGCTGACCTCGTGGACACG CTCAAGAGTTTCCGGAAGGAAAAGGAATACTTGCTGCAGCTGCAGGCACA GCTCCAAGAGGAGAGGCTGATACTCCTGAGGATGGGGAGCAACACCAGCA AGCGCCTCCTGCCAAACCCCGCAATCGCGCGTGATTCGGAGGAGGCCAAA CGAGCGCGGGTACCCTCAAGCGTACCTCCGCTACCATTGAAGATGGAGCA GAGCATTGCGCGCAGTTCTTCTTTTGCTGCTGCTGCTGCCGCTTCCACCC CGCACGCCGTGGATGTCCATGTGTCGCCGAGGAAACGGAGGACCAACGAC GATGACGACGAGGAAAGAGAGACACATTCTTCCGGTCCCTTGTGTTCGGG GGAGCCTGGTGAAACTAGAGCCTCTCGGGCCAACCGCACCCGTTCACCAT CGGGCGGTGCTTGGGCTATCGAGGTCTAA back to top
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