mRNA_A-nodosum_M_contig1062.14.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE) HSP 1 Score: 265 bits (678), Expect = 1.170e-77 Identity = 125/202 (61.88%), Postives = 158/202 (78.22%), Query Frame = 1
Query: 601 NTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKKKGKKEGTR 1206
N ERK PHCM+RL+G+L +D +RPL+I++RLQATR +LD SAVG R +W+ +RFRD H VR+IVD V++ NPNII QPNISA K+ KMW+AAKAKWNTP NWK ESGNNQPW+SFCQGDTD++++G A+ KYPEL+QVC++L P+DAQREDDGTG G T GA++R AKR+ RLY +R G K+ KK+G R
Sbjct: 36 NITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRR 236
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 262 bits (670), Expect = 1.550e-74 Identity = 150/333 (45.05%), Postives = 197/333 (59.16%), Query Frame = 1
Query: 280 SPTCVELDPRKAGRKKYRGDAVPEG--------AVLALLNALLLVDV*RDPVKTFRYEHKEYKLSDIFAAIDKEDAQKRSTGEERGGGSSAAGAEGSGVGRASGPEGGDAAGRGV------------------NTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKKKGKKEG 1200
SP +LD AG K RG EG A+L + +V + RD + F E +Y ++D++ A++KE+ PE D+AG + ERK PHCM+RL+GIL +D +RPL+I++RLQATR +LD SAVG R +W+ +RFRD H VR+IVD V++ NPNII QPNISA K+ KMW+AAKAKWNTP+ NWK ESGNNQPW+SFCQGDTD++++G A+ KYPEL+QVC++ P DAQREDDGTG G T GA++R AKR+ RL +R G K+ KK G
Sbjct: 90 SPYFDDLDAIVAG-KSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENT----------------------------PELEDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG 393
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 261 bits (666), Expect = 4.650e-74 Identity = 148/334 (44.31%), Postives = 198/334 (59.28%), Query Frame = 1
Query: 280 SPTCVELDPRKAGR-----KKYRGD---AVPEGAVLALLNALLLVDV*RDPVKTFRYEHKEYK-LSDIFAAIDKEDAQKRSTGEERGGGSSAAGAEGSGVGRASGPEGGDAAGRGV------------------NTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKKKGKKEG 1200
SP +LD AG ++ G+ A+P A+L + +V + RD + F E +Y ++D++ A++KED PE D+AG N ERK PHCM+RL+G+L +D +RPL+I++RLQATR +LD SAVG R +W+ +RFRD H VR VD V++ NPNII QPNISA K+ KMW+AAKAKWNTP+ NWK ESGNNQPW+SFCQGDTD++++G A+ KYPEL+QVC++L P+DAQREDDGTG G T GA++ AKR+ RLY +R G + KK G
Sbjct: 94 SPYFDDLDAIAAGESGRGSEQEEGEEEGAIPASALLMFRGVVNMVALARDSTEPFTVEGVDYSSVADLYDAMEKEDK----------------------------PELEDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGG 399
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 259 bits (663), Expect = 1.990e-73 Identity = 149/311 (47.91%), Postives = 195/311 (62.70%), Query Frame = 1
Query: 307 RKAGRKKYRGDAVPEGAVLALLNALLLVDV*RDPVKTFRYEHKEYKLSDIFAAIDKEDAQKRSTGEERGGGSSAAGAEGSGVGRASGPEGGDAAGR----GVNTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKKKGKKEGTRARHGGHY 1227
R+ G + A+P A+L N + +V + RD F+ ++ EY ++D++ A+ KED E G G+S G NT ERK PHCM+RL+GIL +D +RPLLI++RLQATR LD S+VG R +W+ RFRD H+VR+IVD V++ +PNII QPNISA KL +MWA AKAKWN P+ NWK ESGNNQPW+SFCQG TD++V+G A+ KYPELNQVC++L P+ AQREDD TG T GAD+R AKR+ RL+ +R GKK KK+G A+ G Y
Sbjct: 203 RRNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--------EAGKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNT-ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK-AKKQGGGAKRGRGY 503
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 255 bits (651), Expect = 9.000e-73 Identity = 141/296 (47.64%), Postives = 186/296 (62.84%), Query Frame = 1
Query: 307 RKAGRKKYRGDAVPEGAVLALLNALLLVDV*RDPVKTFRYEHKEYKLSDIFAAIDKEDAQKRSTGEERGGGSSAAGAEGSGVGRASGPEGGDAAGRGVNTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKKKGKK 1194
R+ G + A+P A+L N + +V + RD F+ ++ EY ++D++ A+ KED G G NT ERK PHCM+RL+GIL +D +RPLLI++RLQATR LD S+VG R +W+ RFRD H+VR+IVD V++ +PNII QPNISA KL +MWA AKAKWN P+ +WK ESGNNQPW+SFCQG TD++V+G A+ KYPELNQVC++L P+ AQREDDGTG T GAD+R AKR+ RL+ +R GKK+ K
Sbjct: 80 RRNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKEDE----AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNT-ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNK 370
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 259 bits (663), Expect = 3.040e-72 Identity = 149/333 (44.74%), Postives = 196/333 (58.86%), Query Frame = 1
Query: 280 SPTCVELDPRKAGRKKYRGDAVPEG--------AVLALLNALLLVDV*RDPVKTFRYEHKEYKLSDIFAAIDKEDAQKRSTGEERGGGSSAAGAEGSGVGRASGPEGGDAAGRGV------------------NTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKKKGKKEG 1200
SP +LD AG K RG EG A+L + +V + RD + F E +Y ++D++ A++KE+ PE D+AG + ERK PHCM+RL+GIL +D +RPL+I++RLQATR +LD SAVG R +W+ +RFRD H VR+IVD V++ NPNII QPNISA K+ KMW+AAKAKWNTP+ NWK ESGNNQPW+SF QGDTD++++G A+ KYPEL+QVC++ P DAQREDDGTG G T GA++R AKR+ RL +R G K+ KK G
Sbjct: 252 SPYFDDLDAIAAG-KSGRGSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENT----------------------------PELEDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG 555
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 253 bits (647), Expect = 3.480e-69 Identity = 142/308 (46.10%), Postives = 182/308 (59.09%), Query Frame = 1
Query: 307 RKAGRKKYRGDAVPEGAVLALLNALLLVDV*RDPVKTFRYEHKEYKLSDIFAAIDKEDAQKRSTGEERGGGSSAAGAEGSGVGRASGPEGGDAAGR----------------GVNTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKK 1182
R G + A+P A+L N + +V + RD F+ ++ EY D++ A+ KED +G G G NT ERK PHCM+RL+GIL +D +RPLLI++RLQATR LD S+VG R +W+ RFRD H+VR+IVD V++ +PNII QPNISA KL +MWA AKAKWN P+ NWK ESGNNQPW+SFCQG TD++V+G A+ KYPELNQVC++L P+ AQREDDGTG T GAD+R AKR+ RL +R GKK
Sbjct: 315 RSNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSKVPFKVDNVEYSAVDLYDALAKEDE--------------------AGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNT-ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKK 601
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE) HSP 1 Score: 250 bits (638), Expect = 1.950e-66 Identity = 121/200 (60.50%), Postives = 153/200 (76.50%), Query Frame = 1
Query: 610 ERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWK-GESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERLYNLSRMGKKKGKKEGTR 1206
ERK PHCM+RL GIL +D +RP +I++RLQATR +LD SAVG R +W+ +RFRD H VR+IVD ++ NPNII QP+I A K+ K W+AAKAKWNTP+ NWK ESGNNQPW+SFCQGDTD++++G A+ KYPEL+QVC++L P+DAQREDDGTG G T GA++R AKR+ RLY +R G K+ KKEG R
Sbjct: 733 ERKGPHCMMRLEGILCEDSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKEGGR 931
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.250e-61 Identity = 103/163 (63.19%), Postives = 128/163 (78.53%), Query Frame = 1
Query: 601 NTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTG 1089
N ERK PHCM+RL+GIL +D +RPL+I++RLQATR +LD SAVG R +W +RFRD H VR+IVD V++ NII QPNISA K+ M +AAKAKWNTP+ NWK E GNNQPW+SFCQGDTD++++G AV KYPEL+QVC++L P+DAQREDD TG
Sbjct: 70 NITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTG 232
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 230 bits (586), Expect = 2.820e-61 Identity = 131/315 (41.59%), Postives = 184/315 (58.41%), Query Frame = 1
Query: 277 ASPTCVELDPRKAGR-------KKYRGD---AVPEGAVLALLNALLLVDV*RDPVKTFRYEHKEYKLSDIFAAIDKEDAQKRSTGEERGGGSSAAGAEGSGVGRASGPEGGDAAGRGV------------NTCERKSPHCMIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDETHEVRRIVDHPFVANCNPNIIHQPNISANKLYKMWAAAKAKWNTPHTNWKGESGNNQPWVSFCQGDTDSFVIGKAVRKYPELNQVCSDLPPDDAQREDDGTGAVGGVTSGADQRVVAKRKSERL 1155
+SP +LD AG+ ++ G+ A+P A+ + +V RD + F +E +Y ++++F A++++ K G+ GG S P GG + + ERK PH M+RL+GI +D + PL I++R+QATR +LD SAV R +W+ +RFRD H VR+IVD V++ NPNII QPN SA K+ W+AA+A WNTP+ NW ESGNNQPWVSF QGDTD++++G A KYPEL+QVC++L P+DAQREDDGTG T GA++R AKR+ RL
Sbjct: 219 SSPYFDDLDAIAAGKSGCGRGSEQEEGEEEAAIPAKAMPTFRGVVNMVAQARDSTEPFIFEDVDYSVANLFDAMEED---KPELGDSAGG---------------SAPNGGSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARL 515 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1062.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1062.14.1 >prot_A-nodosum_M_contig1062.14.1 ID=prot_A-nodosum_M_contig1062.14.1|Name=mRNA_A-nodosum_M_contig1062.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=244bp MIRLIGILVKDDVRPLLIDTRLQATRGQLDVSAVGSRGVVWSLAAERFRDback to top mRNA from alignment at A-nodosum_M_contig1062:194128..197597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1062.14.1 ID=mRNA_A-nodosum_M_contig1062.14.1|Name=mRNA_A-nodosum_M_contig1062.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3470bp|location=Sequence derived from alignment at A-nodosum_M_contig1062:194128..197597- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1062:194128..197597- >mRNA_A-nodosum_M_contig1062.14.1 ID=mRNA_A-nodosum_M_contig1062.14.1|Name=mRNA_A-nodosum_M_contig1062.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at A-nodosum_M_contig1062:194128..197597- (Ascophyllum nodosum dioecious)back to top |