mRNA_A-nodosum_M_contig1058.41.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: D7FX86_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX86_ECTSI) HSP 1 Score: 236 bits (601), Expect = 3.250e-74 Identity = 114/154 (74.03%), Postives = 127/154 (82.47%), Query Frame = 2
Query: 38 FTGVPGTSRERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEP 499
+TG+PG+ ERSFFA+KPDGLQRGLVGE++SRFERKGW LV LKM+ R LVE+HYEEH+ KDFFE LL+YM GPVVAMVWEG VIAGGRK LLGATNPL A GTIRGDLC AG+NLVHASDGPESA+REI LWF EE V W RA +P
Sbjct: 53 WTGMPGSITERSFFAIKPDGLQRGLVGEVMSRFERKGWKLVGLKMLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRK-LLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIELWFSREETVQWGRATDP 205
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: NDK_THEVB (Nucleoside diphosphate kinase n=9 Tax=Cyanobacteria TaxID=1117 RepID=NDK_THEVB) HSP 1 Score: 199 bits (507), Expect = 8.510e-61 Identity = 91/147 (61.90%), Postives = 117/147 (79.59%), Query Frame = 2
Query: 65 ERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 505
ER+F A+KPDG+QRGLVG I+ RFE+KG+TLV LK++ VSR L EQHY EH K FF L+N+++ GPVVAMVWEG+GVIA RK L+GATNPLNAE GT+RGD + G+N++H SD PE+A+REI LWF+ +E+VPW A+ W+
Sbjct: 2 ERTFLAIKPDGVQRGLVGTIIQRFEQKGYTLVGLKLMRVSRELAEQHYGEHKDKPFFPGLVNFITSGPVVAMVWEGRGVIANARK-LIGATNPLNAEPGTLRGDFAVDVGRNVIHGSDSPENAEREINLWFQTQELVPWEPALTSWV 147
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: A0A835Z9B5_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B5_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.560e-60 Identity = 95/158 (60.13%), Postives = 119/158 (75.32%), Query Frame = 2
Query: 35 PFTGVPGTSRERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWIS 508
P+TG PGT ERSF A+KP+GLQRGLVG++++RFERKG LVALK+ + + V QHY EH GK FF L+ +M GP+V MVWEG VI GGR+ +LG T+PL AE GTIRGDLC+C+ +NLVHASD P+SA REI LWF E E+ PW R E +++
Sbjct: 37 PYTGSPGTLAERSFVAIKPEGLQRGLVGDVITRFERKGLKLVALKLEQPTPAKVRQHYAEHEGKPFFAGLVRHMCSGPLVLMVWEGPNVIEGGRR-MLGKTDPLEAEPGTIRGDLCVCSTRNLVHASDAPDSALREIRLWFSEAELAPWGRTSEEYLT 193
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: UPI001A05EC99 (Nucleoside-diphosphate kinase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI001A05EC99) HSP 1 Score: 197 bits (501), Expect = 6.630e-60 Identity = 93/147 (63.27%), Postives = 118/147 (80.27%), Query Frame = 2
Query: 65 ERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 505
ER+F AVKPDG+QR LVGEI+SRFE KG+TLV LK++ VSRSL EQHY EH K FF +L+ +++ GPVVAMVWEGKGV+A RK ++G+TNPLNAE GTIRGD + G+N++H SD E+AKREI+LWF+EEE+V W ++ WI
Sbjct: 2 ERTFIAVKPDGVQRQLVGEIISRFESKGFTLVGLKLVKVSRSLAEQHYAEHKEKPFFPSLVEFITSGPVVAMVWEGKGVVAAARK-MIGSTNPLNAEPGTIRGDFGVDVGRNIIHGSDAVETAKREISLWFKEEELVGWEPSLTRWI 147
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: A0A7S2ACX5_9EUKA (Nucleoside diphosphate kinase (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2ACX5_9EUKA) HSP 1 Score: 199 bits (507), Expect = 9.740e-60 Identity = 89/158 (56.33%), Postives = 120/158 (75.95%), Query Frame = 2
Query: 32 VPFTGVPGTSRERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 505
VP G+PGT+ ER+F A+KPDG+QRGLVGE++ RFE +G+ LVA+KM+ + +HY++ S K FF L Y S GPVVAMVWEGKG I+GGRK L+GATNP ++ G+IRGDLCI G+N++H SDGP+SAK EIALWF++ +V W ++ + W+
Sbjct: 69 VPLVGIPGTNNERTFIAIKPDGVQRGLVGEVIKRFEARGYKLVAIKMVRPTPQFAAKHYQDLSKKPFFPGLCKYFSSGPVVAMVWEGKGAISGGRK-LVGATNPADSLPGSIRGDLCIDIGRNIIHGSDGPDSAKHEIALWFKDADVAAWQQSTQQWV 225
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: A0A1U7I7F4_9CYAN (Nucleoside diphosphate kinase n=3 Tax=Phormidium TaxID=1198 RepID=A0A1U7I7F4_9CYAN) HSP 1 Score: 195 bits (496), Expect = 3.760e-59 Identity = 90/147 (61.22%), Postives = 115/147 (78.23%), Query Frame = 2
Query: 65 ERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 505
ER+F A+KPDG+QR LVGEI+SR E KG+TLV LK++ VSR L EQHY+ H + FF L+++++ GPVVAMVWEG GVIA RK ++GATNPLNAE GTIRGD + G+NL+H SD PE+A REI+LWF++EE+V W I PW+
Sbjct: 2 ERTFLAIKPDGVQRSLVGEIISRLESKGFTLVGLKLVKVSRELAEQHYDVHKERPFFPGLVDFITSGPVVAMVWEGDGVIASARK-IIGATNPLNAEPGTIRGDFGVSVGRNLIHGSDAPETATREISLWFKDEELVSWQPTITPWL 147
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: A0A1Z4NI87_9CYAN (Nucleoside diphosphate kinase n=1 Tax=Calothrix sp. NIES-3974 TaxID=2005462 RepID=A0A1Z4NI87_9CYAN) HSP 1 Score: 194 bits (493), Expect = 1.070e-58 Identity = 89/147 (60.54%), Postives = 117/147 (79.59%), Query Frame = 2
Query: 65 ERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 505
ER+F A+KPDG+QRGLVGEI+SRFE KG+TLV LK++ VSR L E HY+ H + FF L+ +++ GPVVAMVWEG GVIA RK ++GATNPLNAE GTIRGDL I G+N++H SD PE+A++E++LWF++EE+V W + PW+
Sbjct: 2 ERTFLAIKPDGVQRGLVGEIISRFETKGFTLVGLKLLNVSRELAEAHYDVHRERPFFPGLVEFITSGPVVAMVWEGDGVIAAARK-MIGATNPLNAEPGTIRGDLGINIGRNIIHGSDAPETAQKEVSLWFKDEELVSWQPQMTPWL 147
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: L8GQE5_ACACA (Nucleoside diphosphate kinase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQE5_ACACA) HSP 1 Score: 197 bits (500), Expect = 1.500e-58 Identity = 91/162 (56.17%), Postives = 120/162 (74.07%), Query Frame = 2
Query: 32 VPFTGVPGTSRERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWISRSL 517
VP TG+PGT ER+F A+KPDG+QRG+VGEI+ RFE+KG+ LV LK++ ++ EQHY + S K FF +L+NY S GPVVAMV+EG+ I GRK ++GATNP +AE G++RGDLCI G+N++H SDGPESAK EI+LWF+E E+ W W+ L
Sbjct: 76 VPHTGLPGTRFERTFIAIKPDGVQRGIVGEIIQRFEKKGYKLVGLKVVKPTKQFAEQHYADLSKKPFFPSLVNYFSSGPVVAMVFEGRNAIVNGRK-IVGATNPADAEAGSVRGDLCIDIGRNIIHGSDGPESAKDEISLWFKEGELANWESENAKWVYEKL 236
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: NDK_ACAM1 (Nucleoside diphosphate kinase n=7 Tax=Cyanobacteria TaxID=1117 RepID=NDK_ACAM1) HSP 1 Score: 194 bits (492), Expect = 1.510e-58 Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 2
Query: 65 ERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 505
ER+F AVKPDG+QRGLVGEI+SR+E KG+TLV LK+++VSR L EQHY EH K FF L+++++ GPVVAMVWEGKGV+A RK ++GATNPL +E GTIRGD I G+N++H SD E+A+REI+LWF+ EE+ WS + WI
Sbjct: 2 ERTFLAVKPDGVQRGLVGEIISRYEAKGFTLVGLKLMVVSRELAEQHYGEHKEKPFFSGLVDFITSGPVVAMVWEGKGVVAAARK-IIGATNPLGSEPGTIRGDFGIDIGRNIIHGSDAVETAQREISLWFKSEELADWSPTLTSWI 147
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: UPI0016868270 (Nucleoside-diphosphate kinase n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI0016868270) HSP 1 Score: 194 bits (492), Expect = 1.510e-58 Identity = 88/147 (59.86%), Postives = 116/147 (78.91%), Query Frame = 2
Query: 65 ERSFFAVKPDGLQRGLVGEIVSRFERKGWTLVALKMIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 505
ER+F A+KPDG+QRGLVGE++ RFE KG+TL+ LK++ VSR L EQHY H + FF L+++++ GPVVAMVWEG GVIA RK ++GATNPLNAE+GTIRGD + G+NL+H SD PE+A+ EI+LWF+EEE++ W I PW+
Sbjct: 2 ERTFIAIKPDGVQRGLVGEVIRRFESKGFTLIGLKLMNVSRELAEQHYGVHKERPFFPGLVSFITSGPVVAMVWEGDGVIATSRK-MIGATNPLNAELGTIRGDFGVSVGRNLIHGSDAPETAQSEISLWFKEEELMDWKPTITPWL 147 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1058.41.2 >prot_A-nodosum_M_contig1058.41.2 ID=prot_A-nodosum_M_contig1058.41.2|Name=mRNA_A-nodosum_M_contig1058.41.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKback to top mRNA from alignment at A-nodosum_M_contig1058:237694..241499- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1058.41.2 ID=mRNA_A-nodosum_M_contig1058.41.2|Name=mRNA_A-nodosum_M_contig1058.41.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3806bp|location=Sequence derived from alignment at A-nodosum_M_contig1058:237694..241499- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1058:237694..241499- >mRNA_A-nodosum_M_contig1058.41.2 ID=mRNA_A-nodosum_M_contig1058.41.2|Name=mRNA_A-nodosum_M_contig1058.41.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=351bp|location=Sequence derived from alignment at A-nodosum_M_contig1058:237694..241499- (Ascophyllum nodosum dioecious)back to top |