prot_A-nodosum_M_contig1058.41.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig1058.41.2
Unique Name	prot_A-nodosum_M_contig1058.41.2
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	117

Homology

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: D7FX86_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX86_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 7.610e-49
Identity = 80/110 (72.73%), Postives = 87/110 (79.09%), Query Frame = 0

Query:    1 MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEP 110
            M+   R LVE+HYEEH+ KDFFE LL+YM  GPVVAMVWEG  VIAGGRK LLGATNPL A  GTIRGDLC  AG+NLVHASDGPESA+REI LWF  EE V W RA +P
Sbjct:   97 MLTPGRQLVERHYEEHADKDFFEKLLDYMCSGPVVAMVWEGHNVIAGGRK-LLGATNPLEAGAGTIRGDLCTNAGRNLVHASDGPESARREIELWFSREETVQWGRATDP 205

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: NDK_THEVB (Nucleoside diphosphate kinase n=9 Tax=Cyanobacteria TaxID=1117 RepID=NDK_THEVB)

HSP 1 Score: 147 bits (370), Expect = 4.860e-43
Identity = 66/109 (60.55%), Postives = 84/109 (77.06%), Query Frame = 0

Query:    4 VSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            VSR L EQHY EH  K FF  L+N+++ GPVVAMVWEG+GVIA  RK L+GATNPLNAE GT+RGD  +  G+N++H SD PE+A+REI LWF+ +E+VPW  A+  W+
Sbjct:   40 VSRELAEQHYGEHKDKPFFPGLVNFITSGPVVAMVWEGRGVIANARK-LIGATNPLNAEPGTLRGDFAVDVGRNVIHGSDSPENAEREINLWFQTQELVPWEPALTSWV 147

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: A0A1U7I7F4_9CYAN (Nucleoside diphosphate kinase n=3 Tax=Phormidium TaxID=1198 RepID=A0A1U7I7F4_9CYAN)

HSP 1 Score: 144 bits (364), Expect = 3.850e-42
Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 0

Query:    1 MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            ++ VSR L EQHY+ H  + FF  L+++++ GPVVAMVWEG GVIA  RK ++GATNPLNAE GTIRGD  +  G+NL+H SD PE+A REI+LWF++EE+V W   I PW+
Sbjct:   37 LVKVSRELAEQHYDVHKERPFFPGLVDFITSGPVVAMVWEGDGVIASARK-IIGATNPLNAEPGTIRGDFGVSVGRNLIHGSDAPETATREISLWFKDEELVSWQPTITPWL 147

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: UPI001A05EC99 (Nucleoside-diphosphate kinase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI001A05EC99)

HSP 1 Score: 144 bits (364), Expect = 3.850e-42
Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 0

Query:    1 MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            ++ VSRSL EQHY EH  K FF +L+ +++ GPVVAMVWEGKGV+A  RK ++G+TNPLNAE GTIRGD  +  G+N++H SD  E+AKREI+LWF+EEE+V W  ++  WI
Sbjct:   37 LVKVSRSLAEQHYAEHKEKPFFPSLVEFITSGPVVAMVWEGKGVVAAARK-MIGSTNPLNAEPGTIRGDFGVDVGRNIIHGSDAVETAKREISLWFKEEELVGWEPSLTRWI 147

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: UPI000349BB73 (nucleoside-diphosphate kinase n=1 Tax=Pseudanabaena sp. PCC 6802 TaxID=118173 RepID=UPI000349BB73)

HSP 1 Score: 144 bits (362), Expect = 7.740e-42
Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 0

Query:    1 MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            MI+VSR L E+HY EH  K FF  L+N+++ GPVVAMVWEGK VIA  RK ++GATNPLNA+ GTIRG+  +  G+N++H SD PE+A+REIALWF + E+V W   I PWI
Sbjct:   37 MIMVSRELAEKHYGEHKEKPFFPGLVNFITSGPVVAMVWEGKEVIATARK-IVGATNPLNADNGTIRGEFGVDVGRNIIHGSDAPETAEREIALWFTDSELVSWQPTISPWI 147

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: UPI001689995A (nucleoside-diphosphate kinase n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI001689995A)

HSP 1 Score: 142 bits (359), Expect = 2.210e-41
Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 0

Query:    1 MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            ++ VSR L EQHY EH  K FF  L+N+++ GPVVAMVWEGKGV+A  RK ++GATNPLN+E GT+RGD  I  G+N++H SD PE+A REI LWF+E+E+  W  ++  WI
Sbjct:   37 LVTVSRQLAEQHYGEHKEKPFFAGLVNFITSGPVVAMVWEGKGVVASARK-IIGATNPLNSEPGTLRGDFGIDIGRNIIHGSDAPETAVREIGLWFKEDELANWEPSLTTWI 147

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: A0A0D6KWI9_9CYAN (Nucleoside diphosphate kinase n=13 Tax=Cyanobacteria TaxID=1117 RepID=A0A0D6KWI9_9CYAN)

HSP 1 Score: 142 bits (358), Expect = 2.700e-41
Identity = 64/108 (59.26%), Postives = 84/108 (77.78%), Query Frame = 0

Query:    5 SRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            SR L EQHY+ H  + FF  L+ +++ GPVVAMVWEG+GVIA  RK L+GATNPLNAE GTIRGDL I  G+N++H SD PE+A++E+ALWF++EE+V W   + PW+
Sbjct:   36 SRELAEQHYDVHRERPFFAGLVEFITSGPVVAMVWEGEGVIASARK-LIGATNPLNAEPGTIRGDLGINIGRNIIHGSDAPETAQKEVALWFKDEELVNWKPEVTPWL 142

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: B4VQN4_9CYAN (Nucleoside diphosphate kinase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VQN4_9CYAN)

HSP 1 Score: 142 bits (357), Expect = 4.450e-41
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 0

Query:    1 MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            ++ VSR L EQHY  H  K FF  L+ +++ GPVVAMVWEG+G+IA  RK ++GATNPL+AE GTIRGD  +  G+NL+H SDG ++AK EI LWF++EE+V W   I PWI
Sbjct:   37 LMSVSRELAEQHYAVHKDKGFFAGLIEFITSGPVVAMVWEGEGIIASARK-IIGATNPLSAEPGTIRGDFGVTVGRNLIHGSDGSDTAKEEIKLWFKDEELVSWQPTINPWI 147

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: UPI0019EF616D (Nucleoside-diphosphate kinase n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019EF616D)

HSP 1 Score: 142 bits (357), Expect = 4.450e-41
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 0

Query:    4 VSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            VSR L EQHY+ H  K FF  L+N+++ GPVVAMVWEG GV+A  RK L+GATNPL+AE GTIRGD  +  G+NL+H SD  E+A+REIALWF++EE+  W   + PWI
Sbjct:   40 VSRELAEQHYDVHKDKPFFAGLVNFITSGPVVAMVWEGDGVVASARK-LIGATNPLSAEPGTIRGDFGVSIGRNLIHGSDAVETAQREIALWFKDEELANWQPTLTPWI 147

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BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Match: A0A1Z4JZT7_9CYAN (Nucleoside diphosphate kinase n=1 Tax=Calothrix brevissima NIES-22 TaxID=1973478 RepID=A0A1Z4JZT7_9CYAN)

HSP 1 Score: 142 bits (359), Expect = 6.870e-41
Identity = 64/108 (59.26%), Postives = 84/108 (77.78%), Query Frame = 0

Query:    5 SRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRKQLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEEVVPWSRAIEPWI 112
            SR L EQHY+ H  + FF  L+ +++ GPVVAMVWEG+GVIA  RK L+GATNPLNAE GTIRGDL I  G+N++H SD PE+A++E+ALWF++EE+V W   + PW+
Sbjct:   79 SRELAEQHYDVHRERPFFAGLVEFITSGPVVAMVWEGEGVIASARK-LIGATNPLNAEPGTIRGDLGINIGRNIIHGSDAPETAQKEVALWFKDEELVNWQPTVTPWL 185

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1058.41.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FX86_ECTSI	7.610e-49	72.73	Nucleoside diphosphate kinase n=2 Tax=Ectocarpus T...	[more]
NDK_THEVB	4.860e-43	60.55	Nucleoside diphosphate kinase n=9 Tax=Cyanobacteri...	[more]
A0A1U7I7F4_9CYAN	3.850e-42	58.04	Nucleoside diphosphate kinase n=3 Tax=Phormidium T...	[more]
UPI001A05EC99	3.850e-42	58.93	Nucleoside-diphosphate kinase n=1 Tax=Oscillatoria...	[more]
UPI000349BB73	7.740e-42	59.82	nucleoside-diphosphate kinase n=1 Tax=Pseudanabaen...	[more]
UPI001689995A	2.210e-41	57.14	nucleoside-diphosphate kinase n=1 Tax=Leptolyngbya...	[more]
A0A0D6KWI9_9CYAN	2.700e-41	59.26	Nucleoside diphosphate kinase n=13 Tax=Cyanobacter...	[more]
B4VQN4_9CYAN	4.450e-41	57.14	Nucleoside diphosphate kinase n=1 Tax=Coleofascicu...	[more]
UPI0019EF616D	4.450e-41	59.63	Nucleoside-diphosphate kinase n=1 Tax=Synechococca...	[more]
A0A1Z4JZT7_9CYAN	6.870e-41	59.26	Nucleoside diphosphate kinase n=1 Tax=Calothrix br...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 77..96 score: 62.98 coord: 32..49 score: 63.35 coord: 54..70 score: 64.04 coord: 12..31 score: 38.71
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 1..103 e-value: 2.2E-33 score: 126.9
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 1..101 e-value: 5.7E-34 score: 117.0
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 1..115 e-value: 1.0E-39 score: 137.9
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 1..112
None	No IPR available	PIRSR	PIRSR036503-50	PIRSR036503-50	coord: 1..100 e-value: 1.7E-9 score: 35.0
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 4..113
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 4..113
None	No IPR available	CDD	cd04413	NDPk_I	coord: 1..96 e-value: 1.56586E-57 score: 172.268
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 77..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig1058	contig	A-nodosum_M_contig1058:238118..239907 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1058.41.2	mRNA_A-nodosum_M_contig1058.41.2	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig1058 237694..241499 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig1058.41.2 ID=prot_A-nodosum_M_contig1058.41.2|Name=mRNA_A-nodosum_M_contig1058.41.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp
MIIVSRSLVEQHYEEHSGKDFFENLLNYMSLGPVVAMVWEGKGVIAGGRK
QLLGATNPLNAEVGTIRGDLCICAGKNLVHASDGPESAKREIALWFREEE
VVPWSRAIEPWISRSL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR034907	NDK-like_dom
IPR036850	NDK-like_dom_sf
IPR023005	Nucleoside_diP_kinase_AS