mRNA_A-nodosum_M_contig1049.25.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: D8LB24_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB24_ECTSI) HSP 1 Score: 467 bits (1202), Expect = 1.740e-161 Identity = 272/408 (66.67%), Postives = 297/408 (72.79%), Query Frame = 1
Query: 7 VVDSRLLAASCFAGLSSIWRHSAKIGRDGFLMNNFPIQGVSMDMAVRQVPGDGNCLFHAISVCLDHACNGTHPSLDLNELMPKSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVGFCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFPCQETVGT--SPGQSLGGPGESGSLRGSAAEASAIG-GGKQPGFLRRFLSSLLTCSCL---RRKTEDVTDSLG--------TSSE--------SVVEAGEGVGSGSGASWQRGAPFEGEAVVV-PEAVSGARGGGKTGARRWRGGRLSGQTAIRRNGRPVLGWTRVR 1161
+V + LL ASCFAGLSSIWRHSAKI RDGFL ++F +QG+S +MAVRQVPGDGNCLFHAIS CLDHACNGTHPSLDL+ELMPKSA+LRK VAVDYLVDNLK +LYLEKEESVPVYELLSVVAAQYNMTAEHYCE VMRQSSVWGGGPEIVALSNALCRPIHVYELASNGV FCFRRMACFGSP+FDD+QAIHILSADSRFPNLKPG+QL NGNHFLALFPC ETV + + G +GG G S SLRGSAAEASAIG GGK+PG RRFLSSLLTCSCL R ED + G TS+ ++ G GVG SG WQ+G P V + E VSGARGGG T ARR + SG A +GWTR R
Sbjct: 7 LVSALLLPASCFAGLSSIWRHSAKIKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRK------VAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCE------------------VMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVASPDAAGVGVGGGGAS-SLRGSAAEASAIGVGGKKPGKFRRFLSSLLTCSCLSSRRAVREDDEPAAGDVTTITDPTSAHKGAAHPQGAMETGGGGVGGASG--WQQGTPAPDVVVGLGSETVSGARGGGGTHARRGWPQQQSGLAAHNAKKGRGVGWTRTR 387
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: A0A835YZQ7_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ7_9STRA) HSP 1 Score: 276 bits (705), Expect = 1.320e-86 Identity = 144/233 (61.80%), Postives = 168/233 (72.10%), Query Frame = 1
Query: 43 AGLSSIWRHSAKIGRDGFLMNNFPIQGVSMDMAVRQVPGDGNCLFHAISVCLDHACNGTHPSLDLNELMPKSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELASN-GVGFCFRRMACFGSPNFDDR-QAIHILSADSRFPNLKPGKQLTNGNHFLALFPC 735
AGL+++WRHSA+I RDGFL FP++G+ + M VRQVPGDGNCLFH+IS CL+HA +HPSL LN+L+PKSA LRK +AVDYLV + LYLE E+VPV ELL+VVA QYNMT + YC+ MR +VWGGGPEIVALSN L RPIHVYELA+ G FCFRRMACFGSP FD + IHILSAD+RFPNL PG+QL NGNHFL LFPC
Sbjct: 21 AGLNAMWRHSAQIQRDGFLTEAFPVEGLPVQMQVRQVPGDGNCLFHSISACLEHADTSSHPSLHLNDLLPKSAVLRK------MAVDYLVADPDRVLYLEGGETVPVNELLTVVATQYNMTVDAYCKH------------------MRLPAVWGGGPEIVALSNCLRRPIHVYELAAGAGRRFCFRRMACFGSPLFDGECEPIHILSADARFPNLAPGQQLANGNHFLCLFPC 229
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: A0A7S3L1U5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1U5_9STRA) HSP 1 Score: 197 bits (501), Expect = 4.070e-57 Identity = 119/250 (47.60%), Postives = 143/250 (57.20%), Query Frame = 1
Query: 61 WRHSAKIGRDGFLMNNF--------------PIQGVSMDMAVRQVPGDGNCLFHAISVCLDHACNGTHPSLD--LNELMPKSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELA--------SNGVGFCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFPCQ 738
W S I DGFL + F Q + +RQVPGDGNCLFH+IS+CL HA NGTH + L +L S +LR Q AVD L K L+L+ E++ EL+ A QY +T+E YC+A M Q VWGGGPEIVALSN L RPIHVYELA S+G F RRMACFGSP FD R+A+HILSADSRFP+L PG+QL+ GNHFLA+FP +
Sbjct: 18 WNTSPHIRYDGFLRDEFRRIPGEWEEEVRLRTRQRLETKCRIRQVPGDGNCLFHSISLCLQHATNGTHWDVSKCLEDLYTHSQTLR------QQAVDCLRQPHK-RLFLQGRETLKSGELVQAAAQQYGLTSEEYCQA------------------MEQDCVWGGGPEIVALSNLLQRPIHVYELATSSSSSKPSSGNTFVLRRMACFGSPRFDRREALHILSADSRFPDLLPGEQLSAGNHFLAVFPLR 242
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: B7G567_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G567_PHATC) HSP 1 Score: 196 bits (497), Expect = 8.690e-56 Identity = 106/219 (48.40%), Postives = 133/219 (60.73%), Query Frame = 1
Query: 121 GVSMDMAVRQVPGDGNCLFHAISVCLDHACNGTHPSLDLNELMPKSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGV----------GFCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFPCQETV 747
G +RQVPGDGNCLFH+IS+CL +A NGTH L+ ++ A ++T + AV+ L + + L+L+ ES+ +EL+ A QYN++ E YC A M+Q SVWGGGPEIVAL N L RPIHVYELAS F RRMACFGSP FD RQ +HILSADSRFP++ PG+QL +GNHFLALFP + V
Sbjct: 86 GTDFPCQIRQVPGDGNCLFHSISLCLQYAANGTHWDLNTSDRRGLDALYEHSQTLRRKAVEVLQHSQR-RLFLQGRESLRAHELVQAAAQQYNLSPEEYC------------------ASMQQDSVWGGGPEIVALCNVLQRPIHVYELASTTTRSSRNDDERQSFVLRRMACFGSPKFDRRQPLHILSADSRFPDVTPGQQLASGNHFLALFPHERKV 285
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: A0A1Z5JTL4_FISSO (OTU domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTL4_FISSO) HSP 1 Score: 190 bits (482), Expect = 8.420e-54 Identity = 114/252 (45.24%), Postives = 143/252 (56.75%), Query Frame = 1
Query: 61 WRHSAKIGRDGFLMN-----------NFPIQGV---SMDMAVRQVPGDGNCLFHAISVCLDHACNGTHPSLD--LNELMPKSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVG------------FCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFP 732
W SA I GFL FP++ V + +RQVPGDGNCLFH++S+CL HA NGTH + L+EL S SLR AV L N K L+L+ +ES+ EL++ A QY++T E YC A M + VWGGGPEIVALSN L RPIHVYELA G F +RMACFGSP FD ++A+HILSADSRFP+++PG+Q+ GNHFL++FP
Sbjct: 49 WNPSALIDEKGFLKGLFRRKKGDWEEEFPMRTVYHTNHPCQIRQVPGDGNCLFHSLSLCLQHAVNGTHWDMPNRLDELYEHSRSLRAK------AVACLRQN-KRKLFLQGKESMRAIELVTSAAQQYDLTPEEYC------------------ATMEEDCVWGGGPEIVALSNILQRPIHVYELAMESPGAEDATDQPKKPTFILKRMACFGSPRFDGKRALHILSADSRFPDIQPGEQMVAGNHFLSVFP 275
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: A0A7S1V4T9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V4T9_9STRA) HSP 1 Score: 182 bits (463), Expect = 5.810e-52 Identity = 104/201 (51.74%), Postives = 125/201 (62.19%), Query Frame = 1
Query: 142 VRQVPGDGNCLFHAISVCLDHACNGTH-PSLDLNELMPKSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELAS---NGVGFCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFP 732
VRQVPGDGNCLFHA+SVCL + +G H P DL +L S SLR Q AVDY+ + L+L+ E + +L+ AAQY +T + Y E MRQ S WGGGPEIVALSN L RPIHVYEL + N F RRM CFGSP FD ++A+HILSADSRFP+++PGKQ GNHFLA+FP
Sbjct: 1 VRQVPGDGNCLFHALSVCLYKSEHGCHFPFGDLGKLQQCSKSLR------QRAVDYVKKKPRRLLFLQAREFLRAKDLIDSSAAQYGVTGDEYLET------------------MRQDSTWGGGPEIVALSNMLRRPIHVYELYAPNRNVQDFRLRRMCCFGSPKFDRQEALHILSADSRFPDVQPGKQKKEGNHFLAIFP 177
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: A0A7S2PB71_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB71_9STRA) HSP 1 Score: 176 bits (447), Expect = 7.980e-48 Identity = 105/220 (47.73%), Postives = 129/220 (58.64%), Query Frame = 1
Query: 142 VRQVPGDGNCLFHAISVCLDHACNGTHPSLDL----NELMPKSASLRKARTGPQVAVDYLVDNL-KGS--LYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELA--------SNGVGFCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFPCQETVGTS 756
VRQVPGDGNCLFH++S+CL +A +H L + EL +S LR AV L + KG L+++ +E + ELLS A+QYN++ E YCEA M Q WGGGPEIVAL NAL RPIHVYEL+ SN F RMACFGSP FD R+ +HILSADSRFP++ PG+Q +GNHFLALFP + TS
Sbjct: 141 VRQVPGDGNCLFHSLSLCLHYAERQSHFPLKVPESFRELFRRSKKLRNT------AVQILQQSTEKGDKLLFMQGQEFLTCSELLSAAASQYNISPEEYCEA------------------MLQDCTWGGGPEIVALVNALRRPIHVYELSVHEELPNGSNSKEFHLSRMACFGSPKFDKREPLHILSADSRFPDITPGRQKKSGNHFLALFPVRSATFTS 336
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: B8C8S4_THAPS (OTU domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8S4_THAPS) HSP 1 Score: 177 bits (449), Expect = 2.060e-47 Identity = 110/282 (39.01%), Postives = 144/282 (51.06%), Query Frame = 1
Query: 10 VDSRLLAASCFAGLSSIWRHSAKI-GRDGFLMNNFPIQGVSMDMAVRQVPGDGNCLFHAISVCLDHACNGTHPSLD----LNELMPKSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELASN------------------------GVGFCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFPCQETVGTSPGQS 768
++S + + L W A I G+ G +P V + + +RQVPGDGNCLFH+I+VCL NGTH S+D +++L +S LR AVD L + + L+L+ EE + ELL AAQ+ + E YCE +MR+ S WGGGPEIVAL N L RPIH+YEL F RRMACFGSP +D R+ +HILSADSRFP+++P K GNHFLALFP + G+S
Sbjct: 103 INSSGFLSHLYPRLPGEWEPLANIRGKHGPRSRTYPKSLVDIPVEIRQVPGDGNCLFHSIAVCLYKVVNGTHISMDSPRSIHQLRCQSLHLRNC------AVDVLQNVPRKRLFLQGEEYLEANELLGAAAAQFELDGEEYCE------------------LMRKESYWGGGPEIVALCNYLQRPIHIYELIPTQQKTTDXXXXXXXXXSQPEHAQPTSTQFTLRRMACFGSPKYDRREPLHILSADSRFPDIEPRKIRKVGNHFLALFPVTTSAAKLIGES 360
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: A0A6U9WPR4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9WPR4_9STRA) HSP 1 Score: 172 bits (437), Expect = 9.920e-47 Identity = 110/266 (41.35%), Postives = 136/266 (51.13%), Query Frame = 1
Query: 49 LSSIWRHSAKIGR-DGFLMNNFPIQGVSMDMAVRQVPGDGNCLFHAISVCLDHACNGTHPSLDLNELMP----KSASLRKARTGPQVAVDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYELA---------------------------------SNGVGFCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFP 732
+S W K+ + D ++N P +RQVPGDGNCLFH+ISV HA NGTH + + M SA+LR Q+AVD L + K L+L+ E + +L+ AAQY +T YC+ +MRQ S WGGGPEIVAL N L RPIHVYEL S F RRMACFGSP FD A+HILSADSRFP+L+PG+QL +GNHFLA+FP
Sbjct: 76 VSGEWEKEVKLRKKDRISLHNSPAM-------IRQVPGDGNCLFHSISVAWAHATNGTHLEMKSPDTMEWLYRTSANLR------QLAVDCLEERRK-LLFLQGHEHLKATDLVEAAAAQYGITGSEYCD------------------LMRQESYWGGGPEIVALCNVLQRPIHVYELHVPEDDNDDDKQRHSRKGKMRSYYRKGYSLSSADSPHSSFVLRRMACFGSPKFDRSPALHILSADSRFPDLRPGEQLESGNHFLAIFP 309
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Match: K0SP19_THAOC (OTU domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SP19_THAOC) HSP 1 Score: 156 bits (395), Expect = 3.840e-40 Identity = 97/228 (42.54%), Postives = 127/228 (55.70%), Query Frame = 1
Query: 142 VRQVPGDGNCLFHAISVCLDHACNGTHPSLDLNE----LMPKSASLRKAR--------TGPQVA-VDYLVDNLKGSLYLEKEESVPVYELLSVVAAQYNMTAEHYCEASDAMDWAALGNRGSPGAVMRQSSVWGGGPEIVALSNALCRPIHVYEL------ASNGVG------------FCFRRMACFGSPNFDDRQAIHILSADSRFPNLKPGKQLTNGNHFLALFP 732
+RQVPGDGNCLFH+I+VCL A NGT +D +E L +S +LR A T P V +D + + L+L+ +E + +ELL+ AAQ+++ E YC +MR+ S WGGGPEIVAL N L RPIH+YEL AS+ F RRMACFGSP FD ++ +HILSADSRFP+++ + GNHFLAL P
Sbjct: 139 IRQVPGDGNCLFHSIAVCLYRAVNGTDIPMDSHECIGRLRDQSLALRNAAVDVLQQQPTKPGVQFIDSIGPKTRRVLFLQGDEYLEAHELLNAAAAQFDLDGEEYCN------------------LMRKESYWGGGPEIVALCNYLQRPIHIYELIPSDEKASSRASQEKYKKLKVSNQFSLRRMACFGSPKFDRKEPLHILSADSRFPDVEARRM---GNHFLALHP 345 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1049.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1049.25.1 >prot_A-nodosum_M_contig1049.25.1 ID=prot_A-nodosum_M_contig1049.25.1|Name=mRNA_A-nodosum_M_contig1049.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=388bp MRVVDSRLLAASCFAGLSSIWRHSAKIGRDGFLMNNFPIQGVSMDMAVRQback to top mRNA from alignment at A-nodosum_M_contig1049:235822..240342+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1049.25.1 ID=mRNA_A-nodosum_M_contig1049.25.1|Name=mRNA_A-nodosum_M_contig1049.25.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4521bp|location=Sequence derived from alignment at A-nodosum_M_contig1049:235822..240342+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1049:235822..240342+ >mRNA_A-nodosum_M_contig1049.25.1 ID=mRNA_A-nodosum_M_contig1049.25.1|Name=mRNA_A-nodosum_M_contig1049.25.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at A-nodosum_M_contig1049:235822..240342+ (Ascophyllum nodosum dioecious)back to top |