mRNA_A-nodosum_M_contig1042.20.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: D8LL91_ECTSI (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL91_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 1.740e-142 Identity = 207/257 (80.54%), Postives = 220/257 (85.60%), Query Frame = 3
Query: 114 MAHSAPP--STGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTK 875
MA S PP S+GISLLTAE+SAALDADLMSTPGFSIDQLMELAGLSVACAI KVYPP SR+L+VCGPGNNGGDGLVAARHLW FGYRP CLYPKPT RQLFTNLVEQCKQLDIEFL S W A L G++D+VLD +FGFGFKGDPRPPFDTIL DLS S + PVVS+DVPSGWSVDEGDS G GLKPEML+SLTAPKLSARFF G HHFLGGRFVPPGI SKY+LELPAYPGSEQCVRLEEWGQ +
Sbjct: 1 MASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPS-----WEAAGDL-------GSYDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQR 245
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A6H5KSM4_9PHAE (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM4_9PHAE) HSP 1 Score: 332 bits (850), Expect = 4.030e-110 Identity = 173/213 (81.22%), Postives = 182/213 (85.45%), Query Frame = 3
Query: 111 SMAHSAPP--STGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSAR 740
SMA S PP S GISLLTAE+SAALDADLMSTPGFSIDQLMELAGLSVACAI KVYPPSSR+L+VCGPGNNGGDGLVAARHLWHFGY+P CLYPKPT RQLFTNLVEQCKQLDIEFL S W A L G+FD+VLD +FGFGFKGDPRPPFDTIL DLS S + PVVS+DVPSGWSVDEGDS GDGLKPEMLVSLTAPKLSAR
Sbjct: 47 SMASSQPPPSSFGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPSSRVLIVCGPGNNGGDGLVAARHLWHFGYKPTCLYPKPTARQLFTNLVEQCKQLDIEFLPS-----WEAAGDL-------GDFDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGDGLKPEMLVSLTAPKLSAR 247
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A813ENK1_POLGL (NAD(P)H-hydrate epimerase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ENK1_POLGL) HSP 1 Score: 282 bits (721), Expect = 2.760e-90 Identity = 144/240 (60.00%), Postives = 170/240 (70.83%), Query Frame = 3
Query: 141 GISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPP--SSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRL 854
G++ L E +AALD DLMSTPGFSIDQLMELAGLSVA A+ + +PP S R L+VCGPGNNGGDGLVAARHLWHFGY P +YP RQLFTNLV QC+QL I L ++ + FD+ +D IFGF FKG PR PFD+IL L +SS+ +VS+D+PSGW V+ GD +G+GL+P+ LVSLTAPK A F GRH FLGGRFVPPGI KY L LP YPG+ Q V L
Sbjct: 102 GVATLGREAAAALDEDLMSTPGFSIDQLMELAGLSVASAVLEAFPPKGSRRALLVCGPGNNGGDGLVAARHLWHFGYTPVVVYPVRPARQLFTNLVVQCEQLGIPVLTGMPTSEEVTE-----------GFDVAVDAIFGFSFKGTPRAPFDSILKTLRASSVKLVSVDIPSGWDVELGDVSGEGLRPDALVSLTAPKPCAADFSGRH-FLGGRFVPPGIAEKYGLRLPPYPGAAQVVEL 329
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A7S0WQ09_9CHLO (NAD(P)H-hydrate epimerase n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WQ09_9CHLO) HSP 1 Score: 281 bits (718), Expect = 1.040e-89 Identity = 137/244 (56.15%), Postives = 173/244 (70.90%), Query Frame = 3
Query: 141 GISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLS--SSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEE 860
GI+ L + + A+D +LM GFS+DQLMELAGLSVAC++ +VYP +S ++L++ GPGNNGGDGLVAARHL HFGY P YPKPT + L+ LV QCK L I F+ + + G FD+VLD +FGF FKGDPRPPF ILN L ++ P+VS+D+PSGW V++GD G GL+P+MLVSLTAPK AR F G HHFLGGRFVPP I +KY+L+LPAYPG+ CVR+ +
Sbjct: 101 GITYLKQDEAVAVDEELMGPLGFSVDQLMELAGLSVACSLAEVYPSTSHPKVLIIAGPGNNGGDGLVAARHLHHFGYTPTICYPKPTDKVLYNGLVTQCKSLRIPFITAE-----------ELLAQPIGAFDVVLDAMFGFSFKGDPRPPFAAILNALKPPANPPPIVSVDIPSGWQVEQGDVDGGGLRPDMLVSLTAPKECARTFEGPHHFLGGRFVPPEIATKYSLKLPAYPGTAMCVRIPQ 333
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A507C3Q7_9FUNG (NAD(P)H-hydrate epimerase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C3Q7_9FUNG) HSP 1 Score: 276 bits (707), Expect = 1.540e-89 Identity = 140/241 (58.09%), Postives = 170/241 (70.54%), Query Frame = 3
Query: 144 ISLLTAENSAALDADLMSTP--GFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRL 854
I +L+A + ALD DLM+ GFS+DQLME+AGLS ACA+T+VY ++ R+LV+ GPGNNGGD LVAARHL+HFGY+P LYPKPTQ+ ++ LV+QCK LDI F+ S + A N D+VLDGIFGF F GD RPPFD I+ L SSIP+VSID+PSGW V++G+ GL PEML+SLTAPK A F G+HH+LG R VPP I KY L LP YPG EQCVRL
Sbjct: 3 IKMLSAPEALALDQDLMNKDIGGFSLDQLMEIAGLSCACALTQVYDRATFPRVLVIAGPGNNGGDALVAARHLFHFGYKPTILYPKPTQKDIYIGLVKQCKNLDIPFVDS--------------VDGAIENADVVLDGIFGFSFSGDIRPPFDNIIKTLKKSSIPIVSIDIPSGWDVEKGNVVSKGLDPEMLISLTAPKPCALHFRGKHHYLGLRIVPPFIDKKYGLNLPEYPGIEQCVRL 229
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A7S2S1N8_9STRA (NAD(P)H-hydrate epimerase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S1N8_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.000e-86 Identity = 131/234 (55.98%), Postives = 168/234 (71.79%), Query Frame = 3
Query: 177 LDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQ----LFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDP--RPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALE-LPAYPGSEQCVRLE 857
LDA+LM TPGFSIDQLMELAGLSVACA+ V+P +S++L VCGPGNNGGD LV+ARHL+HFGY+P LYPK + L+ NL++QCK LDI + S + + ++ D+VLDG+FGF F G R P+D ++ L +++P+ SIDVPSGW V++GD+ GDG+KP MLVSLTAPKL A F G HH+LGGRF+PP + KY L+ LP YPG++QCVRLE
Sbjct: 13 LDAELMQTPGFSIDQLMELAGLSVACAVAAVWPVASKVLTVCGPGNNGGDALVSARHLYHFGYKPVVLYPKAPKESGNGILYRNLLQQCKDLDIPVIDSVPESISQHEY------------DVVLDGVFGFSFNGSNGVRAPYDKVMQVLKETNVPIASIDVPSGWDVEQGDAHGDGIKPSMLVSLTAPKLCASTFKGEHHYLGGRFLPPKLAVKYNLQGLPEYPGTDQCVRLE 234
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A061S844_9CHLO (NAD(P)H-hydrate epimerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S844_9CHLO) HSP 1 Score: 278 bits (711), Expect = 7.360e-86 Identity = 140/258 (54.26%), Postives = 172/258 (66.67%), Query Frame = 3
Query: 144 ISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIP--VVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTKGENTAGEGKL 905
IS L E + +D +LM GFS+DQLMELAGLSVAC+I VYPP+ R+ V+CGPGNNGGDGLVAARHL+HFGY + YPKPT + LF LV QC+ L I F+ + G FDLV+D +FGF FKG PRPPFD IL LS ++ P + +D+PSGW V++GD TG GL+P+ML+SLTAPK AR F G HH+LGGRFVPP +V KY L LP +PGS QCVR+ G TA + +L
Sbjct: 115 ISYLGQEEAVEVDKELMGPLGFSVDQLMELAGLSVACSIADVYPPAQAPRVAVICGPGNNGGDGLVAARHLYHFGYTVQVCYPKPTSKPLFDGLVTQCRSLGIGFVTTEELLQ----------GPMAARFDLVVDAMFGFSFKGSPRPPFDAILAALSPAASPPRLACVDIPSGWHVEDGDQTGVGLRPDMLISLTAPKRGARGFSGAHHYLGGRFVPPAVVEKYHLRLPPFPGSAQCVRIG--GSAAQRGTAADREL 360
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A507CB92_9FUNG (YjeF N-terminal domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CB92_9FUNG) HSP 1 Score: 266 bits (680), Expect = 2.810e-85 Identity = 137/243 (56.38%), Postives = 170/243 (69.96%), Query Frame = 3
Query: 141 GISLLTAENSAALDADLMSTP--GFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRL 854
GI LL+A SA LDA+LM GFS+ QLME+A SVAC+I++VY + RILV GPGNNGGD L AARHL HFGY+P LYPKPT++ ++ LV+QCK L++ F+ + S + N DLVLDGIFGF F GD RPPFD +++ L S SIP+VSID+PSGW V++G+ GL+PEML+SLTAPKL A+FF G+HH+LG R VPP I KY L LP YPG +QCVRL
Sbjct: 3 GIRLLSASVSAVLDAELMDPALGGFSLYQLMEMAAFSVACSISQVYDKKTHPRILVCVGPGNNGGDALAAARHLSHFGYKPTVLYPKPTKKDIYDGLVKQCKNLEMSFIDTIASDDNTMK-----------NTDLVLDGIFGFNFGGDVRPPFDHVISTLKQSPSIPIVSIDIPSGWDVEKGNVDSRGLEPEMLISLTAPKLCAKFFKGKHHYLGLRMVPPFIAEKYQLNLPEYPGIDQCVRL 234
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A8M8UQD9_SESIN (pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X3 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8UQD9_SESIN) HSP 1 Score: 270 bits (689), Expect = 7.060e-85 Identity = 139/266 (52.26%), Postives = 178/266 (66.92%), Query Frame = 3
Query: 144 ISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPS--SRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIP---------VVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTKGENTAGEGKLQ 908
IS LT + +A +D LM GFSIDQLMELAGLSVA A+ +VY PS +R+LV+CGPGNNGGDGLVAARHL HFGY+P YPK T + L+ LV Q + L + F+ S + FL NFD+++D IFGF F+G+PRPPFD ++ ++S S +VS+D+PSGW V++GD +GDG +P+MLVSLTAPKL AR F GR+HFLGGRFVPP ++ KY L LP YPG+ CV++ Q K E+ LQ
Sbjct: 7 ISYLTQQQAAEIDDLLMGNLGFSIDQLMELAGLSVASAVAEVYKPSEYNRVLVICGPGNNGGDGLVAARHLHHFGYKPSIWYPKRTPKPLYAGLVTQLESLSVPFI----SIDSLPQEFL--------NFDIIVDAIFGFSFQGNPRPPFDDLIMSMASLSAHYPEHQKSPVIVSVDIPSGWHVEDGDRSGDGTRPDMLVSLTAPKLCARTFSGRYHFLGGRFVPPSVMQKYKLRLPKYPGTAMCVQIGNSCQIKVEDPVPAKFLQ 260
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A6I9SRD4_SESIN (NAD(P)H-hydrate epimerase n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SRD4_SESIN) HSP 1 Score: 270 bits (689), Expect = 8.210e-84 Identity = 139/266 (52.26%), Postives = 178/266 (66.92%), Query Frame = 3
Query: 144 ISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPS--SRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIP---------VVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTKGENTAGEGKLQ 908
IS LT + +A +D LM GFSIDQLMELAGLSVA A+ +VY PS +R+LV+CGPGNNGGDGLVAARHL HFGY+P YPK T + L+ LV Q + L + F+ S + FL NFD+++D IFGF F+G+PRPPFD ++ ++S S +VS+D+PSGW V++GD +GDG +P+MLVSLTAPKL AR F GR+HFLGGRFVPP ++ KY L LP YPG+ CV++ Q K E+ LQ
Sbjct: 7 ISYLTQQQAAEIDDLLMGNLGFSIDQLMELAGLSVASAVAEVYKPSEYNRVLVICGPGNNGGDGLVAARHLHHFGYKPSIWYPKRTPKPLYAGLVTQLESLSVPFI----SIDSLPQEFL--------NFDIIVDAIFGFSFQGNPRPPFDDLIMSMASLSAHYPEHQKSPVIVSVDIPSGWHVEDGDRSGDGTRPDMLVSLTAPKLCARTFSGRYHFLGGRFVPPSVMQKYKLRLPKYPGTAMCVQIGNSCQIKVEDPVPAKFLQ 260 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1042.20.1 >prot_A-nodosum_M_contig1042.20.1 ID=prot_A-nodosum_M_contig1042.20.1|Name=mRNA_A-nodosum_M_contig1042.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=300bp MNTPAYCQRSTKSGEATTRQGRLPVVCRDFSTSMAHSAPPSTGISLLTAEback to top mRNA from alignment at A-nodosum_M_contig1042:165980..169853+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1042.20.1 ID=mRNA_A-nodosum_M_contig1042.20.1|Name=mRNA_A-nodosum_M_contig1042.20.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3874bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:165980..169853+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1042:165980..169853+ >mRNA_A-nodosum_M_contig1042.20.1 ID=mRNA_A-nodosum_M_contig1042.20.1|Name=mRNA_A-nodosum_M_contig1042.20.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:165980..169853+ (Ascophyllum nodosum dioecious)back to top |