mRNA_A-nodosum_M_contig1042.20.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1042.20.1
Unique NamemRNA_A-nodosum_M_contig1042.20.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: D8LL91_ECTSI (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL91_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 1.740e-142
Identity = 207/257 (80.54%), Postives = 220/257 (85.60%), Query Frame = 3
Query:  114 MAHSAPP--STGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTK 875
            MA S PP  S+GISLLTAE+SAALDADLMSTPGFSIDQLMELAGLSVACAI KVYPP SR+L+VCGPGNNGGDGLVAARHLW FGYRP CLYPKPT RQLFTNLVEQCKQLDIEFL S     W A   L       G++D+VLD +FGFGFKGDPRPPFDTIL DLS S + PVVS+DVPSGWSVDEGDS G GLKPEML+SLTAPKLSARFF G HHFLGGRFVPPGI SKY+LELPAYPGSEQCVRLEEWGQ +
Sbjct:    1 MASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPS-----WEAAGDL-------GSYDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQR 245          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A6H5KSM4_9PHAE (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM4_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 4.030e-110
Identity = 173/213 (81.22%), Postives = 182/213 (85.45%), Query Frame = 3
Query:  111 SMAHSAPP--STGISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSAR 740
            SMA S PP  S GISLLTAE+SAALDADLMSTPGFSIDQLMELAGLSVACAI KVYPPSSR+L+VCGPGNNGGDGLVAARHLWHFGY+P CLYPKPT RQLFTNLVEQCKQLDIEFL S     W A   L       G+FD+VLD +FGFGFKGDPRPPFDTIL DLS S + PVVS+DVPSGWSVDEGDS GDGLKPEMLVSLTAPKLSAR
Sbjct:   47 SMASSQPPPSSFGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPSSRVLIVCGPGNNGGDGLVAARHLWHFGYKPTCLYPKPTARQLFTNLVEQCKQLDIEFLPS-----WEAAGDL-------GDFDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGDGLKPEMLVSLTAPKLSAR 247          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A813ENK1_POLGL (NAD(P)H-hydrate epimerase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ENK1_POLGL)

HSP 1 Score: 282 bits (721), Expect = 2.760e-90
Identity = 144/240 (60.00%), Postives = 170/240 (70.83%), Query Frame = 3
Query:  141 GISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPP--SSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRL 854
            G++ L  E +AALD DLMSTPGFSIDQLMELAGLSVA A+ + +PP  S R L+VCGPGNNGGDGLVAARHLWHFGY P  +YP    RQLFTNLV QC+QL I  L    ++    +            FD+ +D IFGF FKG PR PFD+IL  L +SS+ +VS+D+PSGW V+ GD +G+GL+P+ LVSLTAPK  A  F GRH FLGGRFVPPGI  KY L LP YPG+ Q V L
Sbjct:  102 GVATLGREAAAALDEDLMSTPGFSIDQLMELAGLSVASAVLEAFPPKGSRRALLVCGPGNNGGDGLVAARHLWHFGYTPVVVYPVRPARQLFTNLVVQCEQLGIPVLTGMPTSEEVTE-----------GFDVAVDAIFGFSFKGTPRAPFDSILKTLRASSVKLVSVDIPSGWDVELGDVSGEGLRPDALVSLTAPKPCAADFSGRH-FLGGRFVPPGIAEKYGLRLPPYPGAAQVVEL 329          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A7S0WQ09_9CHLO (NAD(P)H-hydrate epimerase n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WQ09_9CHLO)

HSP 1 Score: 281 bits (718), Expect = 1.040e-89
Identity = 137/244 (56.15%), Postives = 173/244 (70.90%), Query Frame = 3
Query:  141 GISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLS--SSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEE 860
            GI+ L  + + A+D +LM   GFS+DQLMELAGLSVAC++ +VYP +S  ++L++ GPGNNGGDGLVAARHL HFGY P   YPKPT + L+  LV QCK L I F+ +              +    G FD+VLD +FGF FKGDPRPPF  ILN L   ++  P+VS+D+PSGW V++GD  G GL+P+MLVSLTAPK  AR F G HHFLGGRFVPP I +KY+L+LPAYPG+  CVR+ +
Sbjct:  101 GITYLKQDEAVAVDEELMGPLGFSVDQLMELAGLSVACSLAEVYPSTSHPKVLIIAGPGNNGGDGLVAARHLHHFGYTPTICYPKPTDKVLYNGLVTQCKSLRIPFITAE-----------ELLAQPIGAFDVVLDAMFGFSFKGDPRPPFAAILNALKPPANPPPIVSVDIPSGWQVEQGDVDGGGLRPDMLVSLTAPKECARTFEGPHHFLGGRFVPPEIATKYSLKLPAYPGTAMCVRIPQ 333          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A507C3Q7_9FUNG (NAD(P)H-hydrate epimerase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C3Q7_9FUNG)

HSP 1 Score: 276 bits (707), Expect = 1.540e-89
Identity = 140/241 (58.09%), Postives = 170/241 (70.54%), Query Frame = 3
Query:  144 ISLLTAENSAALDADLMSTP--GFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRL 854
            I +L+A  + ALD DLM+    GFS+DQLME+AGLS ACA+T+VY  ++  R+LV+ GPGNNGGD LVAARHL+HFGY+P  LYPKPTQ+ ++  LV+QCK LDI F+ S              +  A  N D+VLDGIFGF F GD RPPFD I+  L  SSIP+VSID+PSGW V++G+    GL PEML+SLTAPK  A  F G+HH+LG R VPP I  KY L LP YPG EQCVRL
Sbjct:    3 IKMLSAPEALALDQDLMNKDIGGFSLDQLMEIAGLSCACALTQVYDRATFPRVLVIAGPGNNGGDALVAARHLFHFGYKPTILYPKPTQKDIYIGLVKQCKNLDIPFVDS--------------VDGAIENADVVLDGIFGFSFSGDIRPPFDNIIKTLKKSSIPIVSIDIPSGWDVEKGNVVSKGLDPEMLISLTAPKPCALHFRGKHHYLGLRIVPPFIDKKYGLNLPEYPGIEQCVRL 229          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A7S2S1N8_9STRA (NAD(P)H-hydrate epimerase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S1N8_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.000e-86
Identity = 131/234 (55.98%), Postives = 168/234 (71.79%), Query Frame = 3
Query:  177 LDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSSRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQ----LFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDP--RPPFDTILNDLSSSSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALE-LPAYPGSEQCVRLE 857
            LDA+LM TPGFSIDQLMELAGLSVACA+  V+P +S++L VCGPGNNGGD LV+ARHL+HFGY+P  LYPK  +      L+ NL++QCK LDI  + S   +  + ++            D+VLDG+FGF F G    R P+D ++  L  +++P+ SIDVPSGW V++GD+ GDG+KP MLVSLTAPKL A  F G HH+LGGRF+PP +  KY L+ LP YPG++QCVRLE
Sbjct:   13 LDAELMQTPGFSIDQLMELAGLSVACAVAAVWPVASKVLTVCGPGNNGGDALVSARHLYHFGYKPVVLYPKAPKESGNGILYRNLLQQCKDLDIPVIDSVPESISQHEY------------DVVLDGVFGFSFNGSNGVRAPYDKVMQVLKETNVPIASIDVPSGWDVEQGDAHGDGIKPSMLVSLTAPKLCASTFKGEHHYLGGRFLPPKLAVKYNLQGLPEYPGTDQCVRLE 234          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A061S844_9CHLO (NAD(P)H-hydrate epimerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S844_9CHLO)

HSP 1 Score: 278 bits (711), Expect = 7.360e-86
Identity = 140/258 (54.26%), Postives = 172/258 (66.67%), Query Frame = 3
Query:  144 ISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIP--VVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTKGENTAGEGKL 905
            IS L  E +  +D +LM   GFS+DQLMELAGLSVAC+I  VYPP+   R+ V+CGPGNNGGDGLVAARHL+HFGY  +  YPKPT + LF  LV QC+ L I F+ +               G     FDLV+D +FGF FKG PRPPFD IL  LS ++ P  +  +D+PSGW V++GD TG GL+P+ML+SLTAPK  AR F G HH+LGGRFVPP +V KY L LP +PGS QCVR+   G      TA + +L
Sbjct:  115 ISYLGQEEAVEVDKELMGPLGFSVDQLMELAGLSVACSIADVYPPAQAPRVAVICGPGNNGGDGLVAARHLYHFGYTVQVCYPKPTSKPLFDGLVTQCRSLGIGFVTTEELLQ----------GPMAARFDLVVDAMFGFSFKGSPRPPFDAILAALSPAASPPRLACVDIPSGWHVEDGDQTGVGLRPDMLISLTAPKRGARGFSGAHHYLGGRFVPPAVVEKYHLRLPPFPGSAQCVRIG--GSAAQRGTAADREL 360          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A507CB92_9FUNG (YjeF N-terminal domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CB92_9FUNG)

HSP 1 Score: 266 bits (680), Expect = 2.810e-85
Identity = 137/243 (56.38%), Postives = 170/243 (69.96%), Query Frame = 3
Query:  141 GISLLTAENSAALDADLMSTP--GFSIDQLMELAGLSVACAITKVYPPSS--RILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSS-SIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRL 854
            GI LL+A  SA LDA+LM     GFS+ QLME+A  SVAC+I++VY   +  RILV  GPGNNGGD L AARHL HFGY+P  LYPKPT++ ++  LV+QCK L++ F+ +  S +               N DLVLDGIFGF F GD RPPFD +++ L  S SIP+VSID+PSGW V++G+    GL+PEML+SLTAPKL A+FF G+HH+LG R VPP I  KY L LP YPG +QCVRL
Sbjct:    3 GIRLLSASVSAVLDAELMDPALGGFSLYQLMEMAAFSVACSISQVYDKKTHPRILVCVGPGNNGGDALAAARHLSHFGYKPTVLYPKPTKKDIYDGLVKQCKNLEMSFIDTIASDDNTMK-----------NTDLVLDGIFGFNFGGDVRPPFDHVISTLKQSPSIPIVSIDIPSGWDVEKGNVDSRGLEPEMLISLTAPKLCAKFFKGKHHYLGLRMVPPFIAEKYQLNLPEYPGIDQCVRL 234          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A8M8UQD9_SESIN (pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X3 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8UQD9_SESIN)

HSP 1 Score: 270 bits (689), Expect = 7.060e-85
Identity = 139/266 (52.26%), Postives = 178/266 (66.92%), Query Frame = 3
Query:  144 ISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPS--SRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIP---------VVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTKGENTAGEGKLQ 908
            IS LT + +A +D  LM   GFSIDQLMELAGLSVA A+ +VY PS  +R+LV+CGPGNNGGDGLVAARHL HFGY+P   YPK T + L+  LV Q + L + F+    S +     FL        NFD+++D IFGF F+G+PRPPFD ++  ++S S           +VS+D+PSGW V++GD +GDG +P+MLVSLTAPKL AR F GR+HFLGGRFVPP ++ KY L LP YPG+  CV++    Q K E+      LQ
Sbjct:    7 ISYLTQQQAAEIDDLLMGNLGFSIDQLMELAGLSVASAVAEVYKPSEYNRVLVICGPGNNGGDGLVAARHLHHFGYKPSIWYPKRTPKPLYAGLVTQLESLSVPFI----SIDSLPQEFL--------NFDIIVDAIFGFSFQGNPRPPFDDLIMSMASLSAHYPEHQKSPVIVSVDIPSGWHVEDGDRSGDGTRPDMLVSLTAPKLCARTFSGRYHFLGGRFVPPSVMQKYKLRLPKYPGTAMCVQIGNSCQIKVEDPVPAKFLQ 260          
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Match: A0A6I9SRD4_SESIN (NAD(P)H-hydrate epimerase n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SRD4_SESIN)

HSP 1 Score: 270 bits (689), Expect = 8.210e-84
Identity = 139/266 (52.26%), Postives = 178/266 (66.92%), Query Frame = 3
Query:  144 ISLLTAENSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPS--SRILVVCGPGNNGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASNCSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSSSSIP---------VVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHFLGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTKGENTAGEGKLQ 908
            IS LT + +A +D  LM   GFSIDQLMELAGLSVA A+ +VY PS  +R+LV+CGPGNNGGDGLVAARHL HFGY+P   YPK T + L+  LV Q + L + F+    S +     FL        NFD+++D IFGF F+G+PRPPFD ++  ++S S           +VS+D+PSGW V++GD +GDG +P+MLVSLTAPKL AR F GR+HFLGGRFVPP ++ KY L LP YPG+  CV++    Q K E+      LQ
Sbjct:    7 ISYLTQQQAAEIDDLLMGNLGFSIDQLMELAGLSVASAVAEVYKPSEYNRVLVICGPGNNGGDGLVAARHLHHFGYKPSIWYPKRTPKPLYAGLVTQLESLSVPFI----SIDSLPQEFL--------NFDIIVDAIFGFSFQGNPRPPFDDLIMSMASLSAHYPEHQKSPVIVSVDIPSGWHVEDGDRSGDGTRPDMLVSLTAPKLCARTFSGRYHFLGGRFVPPSVMQKYKLRLPKYPGTAMCVQIGNSCQIKVEDPVPAKFLQ 260          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1042.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL91_ECTSI1.740e-14280.54NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KSM4_9PHAE4.030e-11081.22NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus sp. C... [more]
A0A813ENK1_POLGL2.760e-9060.00NAD(P)H-hydrate epimerase n=2 Tax=Polarella glacia... [more]
A0A7S0WQ09_9CHLO1.040e-8956.15NAD(P)H-hydrate epimerase n=2 Tax=Pyramimonas obov... [more]
A0A507C3Q7_9FUNG1.540e-8958.09NAD(P)H-hydrate epimerase n=1 Tax=Synchytrium micr... [more]
A0A7S2S1N8_9STRA1.000e-8655.98NAD(P)H-hydrate epimerase n=1 Tax=labyrinthulid qu... [more]
A0A061S844_9CHLO7.360e-8654.26NAD(P)H-hydrate epimerase n=1 Tax=Tetraselmis sp. ... [more]
A0A507CB92_9FUNG2.810e-8556.38YjeF N-terminal domain-containing protein n=1 Tax=... [more]
A0A8M8UQD9_SESIN7.060e-8552.26pyridoxine/pyridoxamine 5'-phosphate oxidase 1, ch... [more]
A0A6I9SRD4_SESIN8.210e-8452.26NAD(P)H-hydrate epimerase n=2 Tax=Sesamum indicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1042contigA-nodosum_M_contig1042:165980..169853 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL91
Preferred nameAPOA1BP
PFAMsPNP_phzG_C,Putative_PNPOx,YjeF_N
Model size1009
Max annot lvl2759|Eukaryota
KEGG rclassRC00048,RC00116
KEGG koko:K00275,ko:K11353,ko:K17759
KEGG TC3.D.1.6
KEGG ReactionR00277,R00278,R01710,R01711
KEGG Pathwayko00190,ko00750,ko01100,ko01120,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map00750,map01100,map01120,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00124,M00146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004733,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005929,GO:0006081,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009165,GO:0009435,GO:0009507,GO:0009536,GO:0009987,GO:0016043,GO:0016491,GO:0016638,GO:0016641,GO:0016853,GO:0016854,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0022607,GO:0031974,GO:0031981,GO:0034356,GO:0034641,GO:0034654,GO:0042364,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046184,GO:0046483,GO:0046496,GO:0046983,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052856,GO:0052857,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0090407,GO:0120025,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617
Exons7
Evalue7.45e-144
EggNOG OGsCOG0062@1|root,KOG2585@2759|Eukaryota
EC1.4.3.5,5.1.99.6
DescriptionNADPHX epimerase activity
Cds size900
COG categoryD
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1042.20.1prot_A-nodosum_M_contig1042.20.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1042 165994..169758 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866416.6029544-UTR-A-nodosum_M_contig1042:165979..1659931680866416.6029544-UTR-A-nodosum_M_contig1042:165979..165993Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1042 165980..165993 +
1680866416.6769862-UTR-A-nodosum_M_contig1042:169758..1698531680866416.6769862-UTR-A-nodosum_M_contig1042:169758..169853Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1042 169759..169853 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866416.6136057-CDS-A-nodosum_M_contig1042:165993..1660581680866416.6136057-CDS-A-nodosum_M_contig1042:165993..166058Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 165994..166058 +
1680866416.621483-CDS-A-nodosum_M_contig1042:166995..1671371680866416.621483-CDS-A-nodosum_M_contig1042:166995..167137Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 166996..167137 +
1680866416.6315923-CDS-A-nodosum_M_contig1042:167712..1678121680866416.6315923-CDS-A-nodosum_M_contig1042:167712..167812Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 167713..167812 +
1680866416.639655-CDS-A-nodosum_M_contig1042:168368..1685071680866416.639655-CDS-A-nodosum_M_contig1042:168368..168507Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 168369..168507 +
1680866416.647878-CDS-A-nodosum_M_contig1042:168865..1690641680866416.647878-CDS-A-nodosum_M_contig1042:168865..169064Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 168866..169064 +
1680866416.6572359-CDS-A-nodosum_M_contig1042:169276..1693561680866416.6572359-CDS-A-nodosum_M_contig1042:169276..169356Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 169277..169356 +
1680866416.6675751-CDS-A-nodosum_M_contig1042:169583..1697581680866416.6675751-CDS-A-nodosum_M_contig1042:169583..169758Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1042 169584..169758 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1042.20.1

>prot_A-nodosum_M_contig1042.20.1 ID=prot_A-nodosum_M_contig1042.20.1|Name=mRNA_A-nodosum_M_contig1042.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=300bp
MNTPAYCQRSTKSGEATTRQGRLPVVCRDFSTSMAHSAPPSTGISLLTAE
NSAALDADLMSTPGFSIDQLMELAGLSVACAITKVYPPSSRILVVCGPGN
NGGDGLVAARHLWHFGYRPKCLYPKPTQRQLFTNLVEQCKQLDIEFLASN
CSTNWRADFFLAFIGTAGGNFDLVLDGIFGFGFKGDPRPPFDTILNDLSS
SSIPVVSIDVPSGWSVDEGDSTGDGLKPEMLVSLTAPKLSARFFHGRHHF
LGGRFVPPGIVSKYALELPAYPGSEQCVRLEEWGQTKGENTAGEGKLQL*
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mRNA from alignment at A-nodosum_M_contig1042:165980..169853+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1042.20.1 ID=mRNA_A-nodosum_M_contig1042.20.1|Name=mRNA_A-nodosum_M_contig1042.20.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3874bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:165980..169853+ (Ascophyllum nodosum dioecious)
GTACAGCTACTGCTATGAATACACCTGCATACTGCCAGCGTAGCACGAAA TCTGGAGAAGCAACCACAAGACAAGGAAGGTATCCTCGGGCACTCACGGT CAAGATTGAGATAAATTGTCGTTCTTCACTGCACCGTTCCTCGGGCTCGG CGCTTACGTAACGAACTACCGGCGTCGATGTTCGCAAGCTGGCGGTCAGT GTTGCTGGGCACACATTGAAACCGTAAACTAAAGTTGTTGTCGCCGTTGC CATGGCACCGAGCGACACAACTTCCAATTTCAGTGTTTGCCTGTGAGACT AAAGTTGGTCGTCACTGCACCAGCTCAGCGATCCCATCCCGTCCCACTCT GTTCTCCTTGAAGTACGTAACAAGCGCGGGTTTGCAATGATATGGCAGGT TCCTGCTTACCGGGCTGGATTGCGCGGTTATGTGCAATTTAATAAATATA CACATACATAAATACAATACATGCATACATAACTGCACTATAGTAAAAAA ACATATTAGTCGCTCCCGTCTAGCCTAGCCCCGGCAGCCAGGGCCCAATT TATCCGCATTACTCCTGTTGAAGCTTATGACATCGCCGAGATTATCTTCC TTGGCAAGAATACTTTTTCTATCTCAAGCTTCTAAGCTCGGCTTCATTCG ACCCTCAGTGATCTTTCAAAGGTACAGTACAAACAACAAAGACCGCGCAT CCTCATGCTGTACAGTGGTACAACAAGCACTACTGCTGTACAACAGCACG GGATACTGCATACTTGCCATAAGCAGTGTTGACTTCATTCGGGACTGGAT CTCGGTGTCCCAGGGGTAGGTCGTAAGTTCGATGAGGTAGATGGGCCAGA TTTGTCTCGAGCAGTCCTAAATCATGACTCCGTGCGTAATTGTCACCGAC CTCTTGTTGAAAACGTCATGCCTAGTTCCAAAACTAGTACTCTGTGTTTG TTTGTGTAATATGGTCATACATTTATTTCTCTACTTGCGCATCTTTTCAA ATATGCCCTCACACAGGCTTCCTGTCGTGTGTAGAGACTTCTCAACATCT ATGGCCCACTCAGCTCCGCCCTCCACTGGCATAAGTCTCTTGACGGCGGA AAATTCGGCGGCCCTTGACGCCGATCTCATGTCGACGCCTGGGTTCAGCA TTGATCAGGTTTTTGCAGTAGGCTTTTTATAGCTCTATCCTATCCAGTTG CCCGTATCGTACGCGTTGCGCTTCTGTTGCATGTCAAAATCTACCTGTAC TGTACCTGGTACATACTTTTGTTTATACTAAGTACTTGATCTTCAGTTTA GCGAAATTTGTGTTCAAGGTATTGCGCGGATGGCCACTTTTCCCATTCGA AGCACAGGGATCGTCGGATAACATTGTTATACTGTCCGTAGCAGGGATAC TACTGTAGCAGGGAGAAAGCATTCTCTAGAGTTTTCATAAAATCAGCTCA TCATGACGTGACATTATTCCATTTGTTCTCCTTCTCTCGTATTTACTTGT ATTATGTATCGGTCCATCGCCACGTGAAACTAGAAATATGAGCACAGGTA TCAAGCCTTCATCGTACGTACTCACCAGAGATTCCACCAGAGTACGAAAT ACGTGTACACCCTACAAAAGAAAACAGCCGTACACTCCATGCGACAGTAG AGAATAATGACGCTACAGATCCCCGAACAACGTTGTAATAACATCCTGAT TAGATTATAAAACCGTTGTGATTTTGCGCCCAGCTCATGGAGCTTGCGGG ATTGAGCGTCGCGTGCGCAATCACCAAGGTATACCCCCCGTCTTCCCGCA TCCTCGTCGTTTGCGGCCCTGGGAACAACGGGGGTGAGTGCCCATAGTAC AATACAATAAAGTATTTACGGTTTCATGGTGAACCATCAGTCCGCAGATT GCCGAAGCGGAAGCCTTGAAGATTACAGTGCTGAGTAATTCAACGAGTGT CTGTAGGGGCGTGTTTTTCGCAGACACAACCTCAAGGGGATATTTTTTTC ACATTTTCTACTGACGGATCCATTCAATGTGTTGGATTACGAATCCCACC GACGGCAACGCTGCCCATCCCCCCCGTGCTGCTAAGGGATCGACCCCGCC ATATTGATCTCCGCGGTTCTCGGCTTCGCTTTTAATTATAATACTATTTA ATAGGGATGCAAGTTCAGCACTCCTGTCCAGCACCTCGTCAAGTCAACCA TACTTGTTCACGTTCTAAGGCTTTCTTTCCGCATGATACCACGCCCGGGT CCAGCGGCAGGCTTGCGCGACTGAAGATTCTACCTTTGATGCTCGCGAGT CGAACCTTTGTACCCATGTCCTTATGCCAGCGGCTTTTGGCTCCATGACC TTCACACCCTCTCGCTTGACGGCCTGGTTTCTTGGTCAGGCGATGGACTT GTGGCCGCAAGGCACCTGTGGCATTTTGGATACAGACCAAAGTGTCTGTA CCCGAAGCCCACGCAACGCCAACTCTTCACCAACCTTGTCGAACAGTGCA AGCAGCTCGATATCGAGTTCTTGGCATCGTGGCCGGGAGCTGAAGAACTA GGCGAGGATTAAAAGGCAGTGAGCTACTCGTAGATCTTCGTGCATTTTTT TTGGAAGCCAAGACAGTGTGCGCATGTCGACGAGTTCACGCACGGTCAAG GCCAGAGAACCAGCATCCAGTCGAATCACGCGAGCTGCGCCGATATTCAC CGCGATTGGTCTGAAGAAGTTTTGGATGCTATAATAGCATTGCATGGCTT GGGCGCTATTAATAGCCGGAATTCCCAAGACAAAATGAACCAGAACAAAA CTACACAAGTAATTCCAAGGAGTCCTGACCATTCTGCGAGTCTGCGAGAC TTGGAAGTAAAGTGTCGCTTACCATAAAGGAGGCAGTAACTGTTCGACTA ACTGGCGAGCTGATTTTTTTCTTGCGTTTATTGGAACAGCAGGTGGAAAC TTCGACCTGGTACTCGACGGGATTTTTGGCTTCGGCTTTAAGGGGGACCC GCGACCGCCTTTCGACACGATTCTTAACGATCTCTCGAGCAGCAGCATTC CCGTGGTTTCAATTGATGTACCCTCGGGCTGGTCGGTGAGGGCACATGCC TACGCAACGCATGATCTCGCTCGGTTCTTGGCGCCTGCGTTCAAACGCAC AGAGATGGAAGTAAAAAATTCACTTGGGATTTTTTTTTTGTTTGATCTGT CGGCCTCAGTGATCGAATCACCTATCACTTGACTTTTTAAAAGTGTTCCC AGCGTCGATCCTGGTATGTCCTCCATCGCTCGCAACTGATCGTGAAGGTC GACGAGGGCGACTCAACAGGGGACGGCTTGAAGCCCGAGATGCTGGTATC GCTCACCGCACCAAAACTCAGCGCGAGGTAGGGCAGCCTGACTACGCGTG ATGGCTACGAAACAAGTGTCCGGCAACCTCCACGCGGTTTCTCCTACTTC CTTTCCGCTATCGGATGTCATATATATGGTCACACATAAAGAACGAGTAT GGATCAACCGGGTAAGGTTGCTAATCCTGCTCGTGGTCAGCTGAAGAGCG AAAATGAATATTTTTACATGCGACTGAATGTTCTCTTTCACATCCCACCC TCAGATTTTTTCATGGGCGACATCACTTCCTCGGGGGGCGTTTCGTGCCC CCAGGCATCGTCAGCAAATATGCTCTGGAGCTGCCAGCGTACCCTGGTTC CGAGCAATGCGTCCGACTTGAAGAATGGGGACAGACGAAAGGAGAAAATA CAGCCGGCGAAGGGAAGCTGCAGCTGTAGCGTACCAGAAAGATCGTGGCG GTGTTTGTTTGGAGGGCAGTGTCTGGCGGTGCTTCCTTAATGCAAGCTGA AGTTTTTCTTTAAAGAAAAATCAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1042:165980..169853+

>mRNA_A-nodosum_M_contig1042.20.1 ID=mRNA_A-nodosum_M_contig1042.20.1|Name=mRNA_A-nodosum_M_contig1042.20.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at A-nodosum_M_contig1042:165980..169853+ (Ascophyllum nodosum dioecious)
ATGAATACACCTGCATACTGCCAGCGTAGCACGAAATCTGGAGAAGCAAC
CACAAGACAAGGAAGGCTTCCTGTCGTGTGTAGAGACTTCTCAACATCTA
TGGCCCACTCAGCTCCGCCCTCCACTGGCATAAGTCTCTTGACGGCGGAA
AATTCGGCGGCCCTTGACGCCGATCTCATGTCGACGCCTGGGTTCAGCAT
TGATCAGCTCATGGAGCTTGCGGGATTGAGCGTCGCGTGCGCAATCACCA
AGGTATACCCCCCGTCTTCCCGCATCCTCGTCGTTTGCGGCCCTGGGAAC
AACGGGGGCGATGGACTTGTGGCCGCAAGGCACCTGTGGCATTTTGGATA
CAGACCAAAGTGTCTGTACCCGAAGCCCACGCAACGCCAACTCTTCACCA
ACCTTGTCGAACAGTGCAAGCAGCTCGATATCGAGTTCTTGGCATCTAAC
TGTTCGACTAACTGGCGAGCTGATTTTTTTCTTGCGTTTATTGGAACAGC
AGGTGGAAACTTCGACCTGGTACTCGACGGGATTTTTGGCTTCGGCTTTA
AGGGGGACCCGCGACCGCCTTTCGACACGATTCTTAACGATCTCTCGAGC
AGCAGCATTCCCGTGGTTTCAATTGATGTACCCTCGGGCTGGTCGGTCGA
CGAGGGCGACTCAACAGGGGACGGCTTGAAGCCCGAGATGCTGGTATCGC
TCACCGCACCAAAACTCAGCGCGAGATTTTTTCATGGGCGACATCACTTC
CTCGGGGGGCGTTTCGTGCCCCCAGGCATCGTCAGCAAATATGCTCTGGA
GCTGCCAGCGTACCCTGGTTCCGAGCAATGCGTCCGACTTGAAGAATGGG
GACAGACGAAAGGAGAAAATACAGCCGGCGAAGGGAAGCTGCAGCTGTAG
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