mRNA_A-nodosum_M_contig1028.14.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1028.14.1 vs. uniprot
Match: A0A6H5KJS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS1_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.880e-11 Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = 3
Query: 858 SALMRRMTEAGRNGRWRDVQPALEEMLAQGLVSDGRPFTVAIKALGD 998
+A MRRMTEAG+ GRWRDV PALEEML GLV+DGRP+TVAIKALGD
Sbjct: 205 AAFMRRMTEAGKRGRWRDVVPALEEMLNLGLVTDGRPYTVAIKALGD 251
BLAST of mRNA_A-nodosum_M_contig1028.14.1 vs. uniprot
Match: D7G0E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E7_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 9.800e-11 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 3
Query: 837 RQMATRTSALMRRMTEAGRNGRWRDVQPALEEMLAQGLVSDGRPFTVAIKALGD 998
++ A+ +A MRRMTEAG+ GRWRDV PALEEM + GLV+DGRP+TVAIKALGD
Sbjct: 30 KKSASAAAAFMRRMTEAGKRGRWRDVVPALEEMRSLGLVTDGRPYTVAIKALGD 83 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1028.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1028.14.1 >prot_A-nodosum_M_contig1028.14.1 ID=prot_A-nodosum_M_contig1028.14.1|Name=mRNA_A-nodosum_M_contig1028.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1089bp MFHTECAVCFHGAKVPCRNTSAELACGFPATLPTSAVHQTRSTPQSHVQGback to top mRNA from alignment at A-nodosum_M_contig1028:221127..245646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1028.14.1 ID=mRNA_A-nodosum_M_contig1028.14.1|Name=mRNA_A-nodosum_M_contig1028.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=24520bp|location=Sequence derived from alignment at A-nodosum_M_contig1028:221127..245646- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1028:221127..245646- >mRNA_A-nodosum_M_contig1028.14.1 ID=mRNA_A-nodosum_M_contig1028.14.1|Name=mRNA_A-nodosum_M_contig1028.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3267bp|location=Sequence derived from alignment at A-nodosum_M_contig1028:221127..245646- (Ascophyllum nodosum dioecious)back to top |