mRNA_A-nodosum_M_contig10155.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig10155.2.1
Unique NamemRNA_A-nodosum_M_contig10155.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: K5UIC4_PHACS (Uncharacterized protein n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5UIC4_PHACS)

HSP 1 Score: 58.5 bits (140), Expect = 1.400e-10
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            MLPG PGSARCVQ FDDSL+SA   TYRISLRSSS
Sbjct:    1 MLPGIPGSARCVQRFDDSLNSAIHITYRISLRSSS 35
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BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A0E9NCQ7_SAICN (Uncharacterized protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NCQ7_SAICN)

HSP 1 Score: 56.2 bits (134), Expect = 2.520e-8
Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            MLPG PGSA CVQ FDDSL+SA   TYRISLRSSS
Sbjct:  122 MLPGIPGSAMCVQRFDDSLNSAIHITYRISLRSSS 156
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BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A2H3J453_WOLCO (Uncharacterized protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J453_WOLCO)

HSP 1 Score: 52.0 bits (123), Expect = 6.170e-8
Identity = 27/35 (77.14%), Postives = 27/35 (77.14%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P  ARCVQ FDDSLDSA   TYRISLRSSS
Sbjct:    1 MLLGIPRGARCVQRFDDSLDSAIHITYRISLRSSS 35
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BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: R7SKF8_DICSQ (Uncharacterized protein n=1 Tax=Dichomitus squalens (strain LYAD-421) TaxID=732165 RepID=R7SKF8_DICSQ)

HSP 1 Score: 51.6 bits (122), Expect = 7.460e-8
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P SARCVQ FDDSL+SA   TYRISLRSSS
Sbjct:    1 MLLGIPRSARCVQRFDDSLNSAIHITYRISLRSSS 35
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BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A0P9EDQ3_RHOGW (Uncharacterized protein n=2 Tax=Basidiomycota TaxID=5204 RepID=A0A0P9EDQ3_RHOGW)

HSP 1 Score: 51.6 bits (122), Expect = 8.370e-8
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P SARCVQ FDDSL+SA   TYRISLRSSS
Sbjct:    1 MLLGIPRSARCVQRFDDSLNSAIHITYRISLRSSS 35
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BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A067LQX6_9AGAM (Uncharacterized protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067LQX6_9AGAM)

HSP 1 Score: 51.6 bits (122), Expect = 8.560e-8
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P SARCVQ FDDSL+SA   TYRISLRSSS
Sbjct:    1 MLLGIPRSARCVQRFDDSLNSAIHITYRISLRSSS 35
[Close]
BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A316V2G1_9BASI (Uncharacterized protein n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316V2G1_9BASI)

HSP 1 Score: 51.6 bits (122), Expect = 8.560e-8
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P SARCVQ FDDSL+SA   TYR+SLRSSS
Sbjct:    1 MLRGIPRSARCVQRFDDSLNSAIHITYRVSLRSSS 35
[Close]
BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A0P9GVD2_RHOGW (Uncharacterized protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A0P9GVD2_RHOGW)

HSP 1 Score: 51.6 bits (122), Expect = 1.030e-7
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P SARCVQ FDDSL+SA   TYRISLRSSS
Sbjct:    1 MLLGIPRSARCVQRFDDSLNSAIHITYRISLRSSS 35
[Close]
BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A2X0KI11_9BASI (BZ3500_MvSof-1268-A1-R1_C047g00159 protein n=2 Tax=Microbotryum TaxID=34416 RepID=A0A2X0KI11_9BASI)

HSP 1 Score: 51.2 bits (121), Expect = 1.080e-7
Identity = 26/35 (74.29%), Postives = 27/35 (77.14%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P SARCVQ FDDSL+SA   TY ISLRSSS
Sbjct:    1 MLAGIPASARCVQRFDDSLNSAIHITYHISLRSSS 35
[Close]
BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Match: A0A8K0JE16_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JE16_9TREE)

HSP 1 Score: 51.6 bits (122), Expect = 1.490e-7
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    1 MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS 105
            ML G P SARCVQ FDDSL+SA   TYRISLRSSS
Sbjct:    1 MLLGIPRSARCVQRFDDSLNSAIHITYRISLRSSS 35
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10155.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K5UIC4_PHACS1.400e-1082.86Uncharacterized protein n=1 Tax=Phanerochaete carn... [more]
A0A0E9NCQ7_SAICN2.520e-880.00Uncharacterized protein n=1 Tax=Saitoella complica... [more]
A0A2H3J453_WOLCO6.170e-877.14Uncharacterized protein n=1 Tax=Wolfiporia cocos (... [more]
R7SKF8_DICSQ7.460e-877.14Uncharacterized protein n=1 Tax=Dichomitus squalen... [more]
A0A0P9EDQ3_RHOGW8.370e-877.14Uncharacterized protein n=2 Tax=Basidiomycota TaxI... [more]
A0A067LQX6_9AGAM8.560e-877.14Uncharacterized protein n=1 Tax=Botryobasidium bot... [more]
A0A316V2G1_9BASI8.560e-874.29Uncharacterized protein n=1 Tax=Meira miltonrushii... [more]
A0A0P9GVD2_RHOGW1.030e-777.14Uncharacterized protein n=1 Tax=Rhodotorula gramin... [more]
A0A2X0KI11_9BASI1.080e-774.29BZ3500_MvSof-1268-A1-R1_C047g00159 protein n=2 Tax... [more]
A0A8K0JE16_9TREE1.490e-777.14Uncharacterized protein n=1 Tax=Filobasidium flori... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10155contigA-nodosum_M_contig10155:16142..16249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1047171.Mycgr3P44591
Model size108
Max annot lvl4751|Fungi
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.96e-08
EggNOG OGs2E6PU@1|root,2SDCQ@2759|Eukaryota,3A8A2@33154|Opisthokonta,3P7CI@4751|Fungi,3QYXS@4890|Ascomycota,205J4@147541|Dothideomycetes,3MMSB@451867|Dothideomycetidae
Cds size108
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866375.115089-CDS-A-nodosum_M_contig10155:16141..162491680866375.115089-CDS-A-nodosum_M_contig10155:16141..16249Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10155 16142..16249 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10155.2.1prot_A-nodosum_M_contig10155.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig10155 16142..16249 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10155.2.1

>prot_A-nodosum_M_contig10155.2.1 ID=prot_A-nodosum_M_contig10155.2.1|Name=mRNA_A-nodosum_M_contig10155.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=36bp
MLPGFPGSARCVQSFDDSLDSASRKTYRISLRSSS*
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mRNA from alignment at A-nodosum_M_contig10155:16142..16249+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10155.2.1 ID=mRNA_A-nodosum_M_contig10155.2.1|Name=mRNA_A-nodosum_M_contig10155.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=108bp|location=Sequence derived from alignment at A-nodosum_M_contig10155:16142..16249+ (Ascophyllum nodosum dioecious)
ATGCTCCCAGGATTTCCCGGAAGCGCAAGGTGCGTTCAAAGTTTTGATGA
TTCACTGGATTCTGCAAGTCGCAAGACGTATCGCATTTCGCTGCGTTCTT
CATCGTAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig10155:16142..16249+

>mRNA_A-nodosum_M_contig10155.2.1 ID=mRNA_A-nodosum_M_contig10155.2.1|Name=mRNA_A-nodosum_M_contig10155.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=108bp|location=Sequence derived from alignment at A-nodosum_M_contig10155:16142..16249+ (Ascophyllum nodosum dioecious)
ATGCTCCCAGGATTTCCCGGAAGCGCAAGGTGCGTTCAAAGTTTTGATGA
TTCACTGGATTCTGCAAGTCGCAAGACGTATCGCATTTCGCTGCGTTCTT
CATCGTAG
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