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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 159749.K0QZI6 |
| PFAMs | DDE_Tnp_4 |
| Model size | 219 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Evalue | 1.47e-05 |
| EggNOG OGs | 2E3PU@1|root,2SAQU@2759|Eukaryota |
| Description | DDE superfamily endonuclease |
| Cds size | 216 |
| COG category | S |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680866368.963857-CDS-A-nodosum_M_contig101:753749..753809 | 1680866368.963857-CDS-A-nodosum_M_contig101:753749..753809 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 753750..753809 - |
| 1680866368.9762626-CDS-A-nodosum_M_contig101:754253..754409 | 1680866368.9762626-CDS-A-nodosum_M_contig101:754253..754409 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig101 754254..754409 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig101.43.1 >prot_A-nodosum_M_contig101.43.1 ID=prot_A-nodosum_M_contig101.43.1|Name=mRNA_A-nodosum_M_contig101.43.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=72bp
YLDLVDIHGVSTSTAYLCMWCVIDAINNTTGVGDMCFPQDSEACRQLAAG
FTARSGARGCLDGVVGAVDGLF back to topmRNA from alignment at A-nodosum_M_contig101:753749..754409- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig101.43.1 ID=mRNA_A-nodosum_M_contig101.43.1|Name=mRNA_A-nodosum_M_contig101.43.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=661bp|location=Sequence derived from alignment at A-nodosum_M_contig101:753749..754409- (Ascophyllum nodosum dioecious)
TACTTGGATTTAGTGGATATTCACGGTGTCAGCACATCAACTGCGTACTT
GTGCATGTGGTGCGTCATTGACGCCATCAACAACACAACAGGCGTCGGCG
ACATGTGCTTCCCGCAGGACTCAGAGGCTTGCCGGCAGCTGGCGGCGGGG
TTCACGGTAAGACAGTGTGTTTGTTTTTGTACGTCGTAGTTTTAAGTCCA
GGCAACGGTCGAAGGGGAGGCGTTGGGTGATGTTCGCAGTGCTGTATTTC
GGCCTCGATCGGATGTTGCTTCCTCGTTGAGGGCACAGTATAATATTTTG
ATTCAAACAGCCATTACAAGCAAACACTTGTGGAGGGAAACCTAGTTTCC
CGGACTTATTTGCCAGTGCGGTTCTGACGGGGTTTTTTCGGCTTATCTCG
GTGTGCTGCTCGGGACCTACCGCATGCTTTCGTACAAAGTACGTTTTTTC
ATGCTACTTGATCGGTCAAATGACTTGTACATCGCTCAAGAAACGATTCC
CAGGGAATGCTTTTCGCAAGTGGACAGGTATATTCGTGAGAGTTCCGAAC
AACCCGAATGTTTTAACTCAAGACGAGTATTTTTTGTTGGCGTCGAGCAG
GCAAGGAGCGGTGCTCGGGGTTGCCTCGATGGCGTCGTCGGAGCTGTTGA
CGGGCTCTTCG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig101:753749..754409- >mRNA_A-nodosum_M_contig101.43.1 ID=mRNA_A-nodosum_M_contig101.43.1|Name=mRNA_A-nodosum_M_contig101.43.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=216bp|location=Sequence derived from alignment at A-nodosum_M_contig101:753749..754409- (Ascophyllum nodosum dioecious)
TACTTGGATTTAGTGGATATTCACGGTGTCAGCACATCAACTGCGTACTT
GTGCATGTGGTGCGTCATTGACGCCATCAACAACACAACAGGCGTCGGCG
ACATGTGCTTCCCGCAGGACTCAGAGGCTTGCCGGCAGCTGGCGGCGGGG
TTCACGGCAAGGAGCGGTGCTCGGGGTTGCCTCGATGGCGTCGTCGGAGC
TGTTGACGGGCTCTTC back to top
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