mRNA_A-nodosum_M_contig10053.1.1 (mRNA) Ascophyllum nodosum dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: D7G0F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F6_ECTSI) HSP 1 Score: 112 bits (279), Expect = 6.470e-31 Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 DFEKNVVVSNFERRGWTKT+GDDWNVYWAN YS+KQLFNPETGFRLGDDQ Sbjct: 19 DFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 68
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: A0A6H5J8A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A0_9PHAE) HSP 1 Score: 112 bits (279), Expect = 8.530e-28 Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 DFEKNVVVSNFERRGWTKT+GDDWNVYWAN YS+KQLFNPETGFRLGDDQ Sbjct: 19 DFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 68
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: A0A835Z6J2_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J2_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.350e-24 Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 DFEKNVVVSNF RRGWTKTEGDDWN+YWAN Y++KQLFNPETG RL DDQ Sbjct: 14 DFEKNVVVSNFARRGWTKTEGDDWNIYWANVYNVKQLFNPETGQRLRDDQ 63
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: A0A6A3WFX3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3WFX3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.660e-20 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 D EKNVVV NFERRGWTKTEGDDWN++WAN +IK +FNPE G RL D Q Sbjct: 19 DSEKNVVVWNFERRGWTKTEGDDWNIFWANKTTIKNMFNPENGVRLVDGQ 68
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: A0A2P4XLN3_9STRA (Tubulin-tyrosine ligase family n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLN3_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.950e-20 Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 D EKNVVV NFERRGWTKTEGDDWN+YWA+ SIK +FNPETG RL D Q Sbjct: 164 DAEKNVVVWNFERRGWTKTEGDDWNIYWASKTSIKNMFNPETGIRLVDGQ 213
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: G5A1Y3_PHYSP (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=G5A1Y3_PHYSP) HSP 1 Score: 89.0 bits (219), Expect = 1.770e-19 Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 D EKNVVV NFERRGWTKTEGDDWN+YWAN +IK +FNPE G RL D Q Sbjct: 47 DSEKNVVVWNFERRGWTKTEGDDWNIYWANKTAIKNMFNPENGVRLVDGQ 96
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: A0A7S3MKX9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MKX9_9SPIT) HSP 1 Score: 84.3 bits (207), Expect = 2.130e-19 Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGD-DWNVYWANAYSIKQLFNPETGFRLGDDQ 150 DF+K+V+ NFE+RGW K GD DWN+YWAN +++KQ+FNPETGFRLG+ Q Sbjct: 12 DFDKSVLTLNFEKRGWVKATGDEDWNIYWANPWTVKQIFNPETGFRLGETQ 62
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: A0A8J5M8E9_9STRA (Ion_trans domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M8E9_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 5.420e-19 Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 D EKNVVV NF+RRGWTKTEGDDWN+YWA+ +IK +FNPETG RL D Q Sbjct: 29 DAEKNVVVWNFDRRGWTKTEGDDWNIYWASKTTIKNIFNPETGVRLVDGQ 78
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: A0A418FU72_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FU72_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 5.700e-19 Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 1 DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 D EK+VVV NFERRGW KTEG DWN+YWAN SIK +FNPE G RL D Q Sbjct: 10 DSEKHVVVWNFERRGWQKTEGSDWNIYWANKQSIKSMFNPENGVRLTDGQ 59
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Match: H3HCR5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCR5_PHYRM) HSP 1 Score: 87.4 bits (215), Expect = 7.400e-19 Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 1 Query: 7 EKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQ 150 EKNVVV NFERRGWTKTEGDDWN+YWAN +IK +FNPE G RL D Q Sbjct: 311 EKNVVVWNFERRGWTKTEGDDWNIYWANKTTIKNMFNPENGIRLVDGQ 358 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10053.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10053.1.1 >prot_A-nodosum_M_contig10053.1.1 ID=prot_A-nodosum_M_contig10053.1.1|Name=mRNA_A-nodosum_M_contig10053.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=51bp DFEKNVVVSNFERRGWTKTEGDDWNVYWANAYSIKQLFNPETGFRLGDDQback to top mRNA from alignment at A-nodosum_M_contig10053:15605..16445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10053.1.1 ID=mRNA_A-nodosum_M_contig10053.1.1|Name=mRNA_A-nodosum_M_contig10053.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=841bp|location=Sequence derived from alignment at A-nodosum_M_contig10053:15605..16445+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10053:15605..16445+ >mRNA_A-nodosum_M_contig10053.1.1 ID=mRNA_A-nodosum_M_contig10053.1.1|Name=mRNA_A-nodosum_M_contig10053.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=153bp|location=Sequence derived from alignment at A-nodosum_M_contig10053:15605..16445+ (Ascophyllum nodosum dioecious)back to top |