mRNA_A-nodosum_M_contig1005.19.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_A-nodosum_M_contig1005.19.1 vs. uniprot
Match: A0A6H5KJI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI2_9PHAE)

HSP 1 Score: 720 bits (1859), Expect = 2.370e-251
Identity = 415/632 (65.66%), Postives = 473/632 (74.84%), Query Frame = 1

Query:  118 LILRAGEAMVRAARAMAEAGLRERGPEFAALEAAALGAVAALLPGLATSGDG-SNATGIAEAVVSLVRHCWEG---GTGVAGREVVALAAGRLLLSSTSVLPPHALEASAAVNALLKEASQVSQSLPVGARVLLYESLSAFLLPPKLLEGDMRRVNDLDGRSRAYSEMLAPVLVAFSAAHAGWQNWTGPSPWPGFSDAGVSGALCASCRIISRLCRSFTSTPSKARRVLYQALEPALRPIVALASPLLENA-SGNSKEAASAARALLKMQVSVVETLGQEAGPSFASEAVGSLAAASPHGGVGGGS----------GGRLGGA-GPAWLSSAVFRLLTSVVRTRNASTKALVPQACGLALGRLHALGRLTGGQRVASEGWGDGWLEGPVVETLPEFLDLSKELLVTQWHCFVPSAASRGM-ATSLASAIAARSQRQDAAGSPNDGRGENLSGTGFASEEMASHFGGLMYVLRLTLSLPTKSSGG--------GSGQEGHSVPPDVVRRGLQVLEGAHREAGGLFRFPPFASRWLEPILTDALRGLTEGAHPLLQEEVRHLVFGMAEIDHASFVTQFLPHFLATHYSWLGETHKEALLSPWRAGTHLDAPTFSSFLEDFVSDLGFFRAQAEAA 1938
            L++RAGEA+VRAA  MA AGL  RGPEFAAL+AAAL AV  LLPGLA  GDG SNAT IAEAVV+LVR CWE    G G  GREVV ++AGRLLLS  +VLPP +LEAS AV  LLK++SQV+ +LPV ARVLLY SLSAFL+PP+LL GDM +VNDL+GRSRAYSE++APVL  FSAA AGWQ WTGP PWPGFSD GVS  L  SCR++SRLCR+F STP+KARRVL+QA+ PAL PIV L  PLLE A +G SKEA SAA+ LL++QVSVVE LG+EAGP+FAS AVGSL+AA    GVGG            G + G A GP WLSS  FRLL SV++ RN  T+ALVPQAC LALGRLHALGRLT   + AS GWG+ WLEGPVV+TLP+FLDLSKELLVTQ HCF PS ++ G+  TSLASA++AR+      G             GFASE MA+HF GLM V RL LSLPT  +               GHSVPPD+VRRGL VLE +HR  GGLFRFPPFA+ WL+P+LTDAL GL EGAHPL  EEV  LVF +AE+DH +F T+FLPHFL THYSWLG   KEALL+PWRAGTHLD PTFSSFLE  VSDL FFRAQA AA
Sbjct:   25 LLMRAGEAVVRAAGTMASAGLHVRGPEFAALQAAALSAVGGLLPGLAAGGDGDSNATAIAEAVVALVRSCWESASEGDGD-GREVVPVSAGRLLLSLNTVLPPSSLEASQAVATLLKQSSQVAATLPVAARVLLYSSLSAFLMPPRLLHGDMGKVNDLEGRSRAYSELVAPVLGPFSAALAGWQGWTGPPPWPGFSDEGVSRELSCSCRVLSRLCRTFVSTPAKARRVLFQAVSPALSPIVTLVPPLLEQALAGGSKEAGSAAQGLLRLQVSVVECLGKEAGPTFASSAVGSLSAA----GVGGXXXXXXXXXXXXGAQHGAAAGPPWLSSGSFRLLASVLKARNKETRALVPQACELALGRLHALGRLTSMDQGAS-GWGERWLEGPVVDTLPDFLDLSKELLVTQLHCFQPSTSATGVPGTSLASALSARASLS---GXXXXXXXXXXXXXGFASEAMATHFSGLMTVFRLLLSLPTPPASSPLPGXXXXXXXXXGHSVPPDLVRRGLSVLEASHR-TGGLFRFPPFAATWLQPLLTDALWGLAEGAHPLTHEEVHRLVFDLAEVDHRAFATEFLPHFLGTHYSWLGAEQKEALLAPWRAGTHLDMPTFSSFLEALVSDLSFFRAQANAA 646

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BLAST of mRNA_A-nodosum_M_contig1005.19.1 vs. uniprot
Match: D7FYJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ7_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 8.980e-87
Identity = 155/224 (69.20%), Postives = 179/224 (79.91%), Query Frame = 1

Query:  118 LILRAGEAMVRAARAMAEAGLRERGPEFAALEAAALGAVAALLPGLATSGDG-SNATGIAEAVVSLVRHCWEGGT---GVAGREVVALAAGRLLLSSTSVLPPHALEASAAVNALLKEASQVSQSLPVGARVLLYESLSAFLLPPKLLEGDMRRVNDLDGRSRAYSEMLAPVLVAFSAAHAGWQNWTGPSPWPGFSDAGVSGALCASCRIISRLCRSFTSTPSK 777
            L++RAGEA+VRAA  MA AGL  RGPEFAAL+AAAL AV  LLPGLA   DG +NAT IAEAVV+LVR CWE      G  GREVV ++AGRLLLS  +VLPP +LEAS AV ALLK++SQV+ +LPV ARVLLY SLSAFL+PP+LL GDM +VNDL+GRSRAYSE++ PVL  FSAA AGWQ WTGP PWPGFSD GVS  L  SCR++SRLCR+F STP+K
Sbjct:   22 LLMRAGEAVVRAAATMASAGLHVRGPEFAALQAAALSAVGGLLPGLAAGSDGDNNATAIAEAVVALVRSCWESAASEGGGDGREVVPVSAGRLLLSLNTVLPPSSLEASQAVAALLKQSSQVAATLPVAARVLLYSSLSAFLMPPRLLHGDMGKVNDLEGRSRAYSELVTPVLGPFSAALAGWQGWTGPPPWPGFSDEGVSRELSCSCRVLSRLCRTFVSTPAK 245

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BLAST of mRNA_A-nodosum_M_contig1005.19.1 vs. uniprot
Match: D7FYJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ8_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 7.730e-75
Identity = 123/173 (71.10%), Postives = 135/173 (78.03%), Query Frame = 1

Query: 1444 MASHFGGLMYVLRLTLSLPTKSSG--------GGSGQEGHSVPPDVVRRGLQVLEGAHREAGGLFRFPPFASRWLEPILTDALRGLTEGAHPLLQEEVRHLVFGMAEIDHASFVTQFLPHFLATHYSWLGETHKEALLSPWRAGTHLDAPTFSSFLEDFVSDLGFFRAQAEAA 1938
            MA+HF GLM V RL LSLPT  +         GGSG  GHSVPPD+VRRGL VLE +HR  GGLFRFPPFA+ WL+P+LTDALRGL EGAHPL QEEV  LVF +AE+DH +F T+FLPHFL THYSWLG   KEALL+PWRAGTHLD PTFSSFLE  VSDL FFRAQA AA
Sbjct:    1 MATHFSGLMTVFRLLLSLPTPPASSPLPGDTTGGSGGGGHSVPPDLVRRGLSVLEASHR-TGGLFRFPPFAATWLQPLLTDALRGLAEGAHPLTQEEVHRLVFDLAEVDHRAFATEFLPHFLGTHYSWLGAEQKEALLAPWRAGTHLDVPTFSSFLEALVSDLSFFRAQANAA 172

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1005.19.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1005.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5KJI2_9PHAE	2.370e-251	65.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FYJ7_ECTSI	8.980e-87	69.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FYJ8_ECTSI	7.730e-75	71.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]