mRNA_A-nodosum_M_contig10.11.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10.11.1

>prot_A-nodosum_M_contig10.11.1 ID=prot_A-nodosum_M_contig10.11.1|Name=mRNA_A-nodosum_M_contig10.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=710bp
MSKKGKVKMGLGDFLGSQAAAASQPVKGRILPSGPDPNRDPDERRGGGGR
RYDDDYDGPGSRAEGADTWRRGPGGGGAGMGTSERRGGGYDNERGGMAPE
DGTWRSRAPPARAGGGGYGDRYGDRDGGRDGGRMGGGGFDDRRGGRDGGG
YDAPPPTERKRLQLHSRTAPLPLPPMSPKESEKPTPAPASRPSGPRSNPF
GAAQAVDTTQRDREIEAKLESERQTSFRRRDDTFRSSDKPAIATGDSNPE
EAGTSVNGVDEEIEQKADLDDEGGDEAKPEVDDKEADVESTAPGIEDAER
GGEKPAPPKPVGRWAALRREGGGDDRPSQSVGGFTRRDRDDDRRGGGYGR
DDRSSFGRKSDDVGPGRGSFTSSRMGREPVQPPAPPAGNAFAKRFGSNFD
RDTDRAYPRSSGGMGGGGFDRRDDERRAGMGGGGFDRRDDERRVGMGGGG
FDRRGDFRGGGGGGMGMGPSRFNRDRESDSQRRPDPSSPLERPPQGGRLS
SGSAESPSPARSFSQISIKETKEAKPLPNPVPKPEVTPMPEPEPEPEPEP
EPKEDPTEVARASAEEALASGKRGTELKEFVMTQEKRTTAGALLAAALKD
VATPQDMKWARQEEFGAALVALSADNTEEQVGIIYAVVGKCHEMGFPKET
NGAVVQTIFMGMYNCDLCEEEAFIEWKDDVDSTAEGRMKAVMQTTPWFFW
LVSVEEDED*
back to top

mRNA from alignment at A-nodosum_M_contig10:105552..109925+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10.11.1 ID=mRNA_A-nodosum_M_contig10.11.1|Name=mRNA_A-nodosum_M_contig10.11.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4374bp|location=Sequence derived from alignment at A-nodosum_M_contig10:105552..109925+ (Ascophyllum nodosum dioecious)
ATGTCGAAAAAAGGGAAAGTGAAGATGGGACTCGGAGATTTCCTGGGCTC CCAGGCTGCCGCAGCCTCCCAACCGGTCAAGGGAAGGATTCTACCCTCCG GGCCTGATCCTAACCGAGAGTGAGCTGAGCACAACAATGACATGACAATA AGATGCTTTGATCCTTAAGCCCGACGAATATAGAAATTGCCGCAATCTTC GAACTCCAGTTGCTTGTACGTTTTCGAACTACTCGTCCTTTTTGCTCTCT CAGCTTCCTCTTTTCGCCATCTTTTCGAAGAAGAAATTCCCTTGGTATGA GTTCGAGTGTTTGTGCGGTCAGTATCGAAGGCATCGACTCAGCGAATCAA AGTACGACGTATGAAGAGAATCAAAATCCGACATCCTCTCGTACGATCTC GAGAGCCTAGTAGTTACATTAATGTCAAGGTCAGTCGCCAGCTGGTGCGT TCACACCGGAAGACTTGCCTGGTGTACGGTATACTCACTACGAGTAGCAT CATCGTTATGAACTCCCTACATCGTGCCCTAGGTATTTATTTCCCCGTGT AATGAATTTTCATCCATCATTTTACTCTTTGACAAAGTAATCACCCTGCC CTTACCACGAAACCGCACGTCAGCCCTGATGAACGTCGCGGCGGCGGAGG TAGACGTTACGACGATGACTATGATGGACCAGGATCACGGGCAGAAGGCG CGGATACTTGGAGACGCGGACCTGGCGGAGGGGGCGCGGGTATGGGTACT AGCGAACGACGCGGTGGAGGGTATGACAATGAGCGCGGTGGTATGGCCCC TGAGGATGGGACGTGGCGCAGCCGAGCTCCTCCTGCGCGTGCGGGAGGCG GGGGATATGGTGACCGCTACGGTGATCGTGACGGTGGTCGTGACGGTGGT CGTATGGGTGGGGGAGGCTTCGATGATAGACGCGGAGGCAGGGACGGGGG CGGTTACGATGCCCCACCACCGACAGAGCGCAAGCGACTCCAGTTGCACA GCCGCACCGCGCCTCTACCGTTGCCTCCAATGTCCCCGAAGGAATCAGAG AAACCGACTCCAGCTCCCGCATCCAGGCCATCTGGCCCCAGATCGAACCC GTTTGGCGCGGCGCAGGCGGTAGACACCACCCAGCGGGACAGGGAGATCG AAGCCAAACTGGAGAGCGAGAGGCAAACCTCGTTCCGACGCCGCGACGAC ACCTTTCGTTCTAGTGACAAGCCCGCCATTGCTACTGGAGACTCGAACCC GGAGGAGGCGGGTACAAGCGTGAATGGGGTGGATGAGGAGATTGAACAAA AGGCCGACTTGGATGACGAGGGAGGAGACGAAGCGAAGCCCGAAGTGGAC GACAAAGAGGCTGATGTCGAGAGCACCGCGCCGGGTATTGAGGACGCTGA ACGAGGTGGCGAGAAGCCGGCACCGCCTAAGCCGGTCGGCCGATGGGCAG CTCTCCGACGGGAAGGGGGCGGCGATGACAGGCCTAGCCAGTCCGTTGGC GGCTTCACGAGGAGGGATCGCGATGATGATCGCAGGGGTGGTGGGTATGG TCGGGACGATCGGTCATCCTTCGGAAGAAAAAGCGATGATGTCGGCCCTG GGCGGGGAAGTTTTACCAGTAGCCGTATGGGCCGAGAGCCTGTGCAGCCC CCAGCCCCTCCTGCTGGGAATGCCTTTGCCAAGCGCTTTGGCTCCAACTT CGACCGCGACACGGACCGCGCGTACCCTCGCTCCTCTGGTGGCATGGGAG GGGGCGGGTTTGACCGGCGAGATGACGAACGGCGTGCGGGCATGGGTGGT GGCGGCTTTGACCGGCGAGATGACGAACGGCGTGTGGGCATGGGTGGTGG CGGCTTTGATCGAAGGGGCGATTTCCGCGGCGGTGGTGGCGGCGGCATGG GTATGGGCCCTTCGAGATTCAACAGAGACAGGGAGAGCGATTCCCAGCGT CGGCCTGATCCCAGTTCCCCTCTCGAGCGCCCCCCACAAGGTGGAAGGCT GTCCAGCGGCAGCGCCGAGTCACCCTCGCCAGCACGCTCCTTTTCACAGA TATCGATCAAGGAAACCAAGGAGGCAAAGCCTTTGCCCAACCCGGTGCCG AAACCTGAGGTCACGCCCATGCCCGAGCCTGAGCCTGAGCCTGAACCTGA ACCCGAACCGAAAGAGGACCCGACGGAGGTGGCACGTGCGTCTGCTGAAG AGGCGCTCGCATCCGGAAAGCGGGGCACGGAGCTCAAGGAGTTTGTAATG ACGCAAGAGAAGCGGACCACGGCGGGGGCCCTGCTGGCGGCCGCCCTGAA GGATGTCGCTACACCTCAGGACATGAAGTGGGCGCGGCAGGAGGAGTTCG GGGCTGCGTTGGTTGCGCTGTCAGCGGACAACACAGAGGAGCAAGTGGGC ATCATATACGCGGTGGTAGGCAAGTGCCATGAGATGGGATTCCCGAAAGA GACCAACGGCGCAGTGGTGCAGACCATCTTCATGGGTATGTACAACTGCG ACCTCTGCGAGGAAGAAGCCTTCATCGAGTGGAAGGTAAGTTATGTTGGT GGGAGCGCGCAGATTGTTCCGCTACTCCTCGCGGTGAAGTGAACCATCTA GTCAGTCGCGAGCCGCTTGTTGAGCACCTCTAGAGGCCCAGAGAAGTGTC TTGACGCGGTCTGTCTGTCATTTGATACCGAACTTGTTAGCCACGCTTGT CACCTTATGATTTCACGCAGGATAATTGAACACGTCTACCGCCAATGCTG CCCTTGGTGGCAATGATTGTGCCGCAGTGATCGAGCAAGTTACAGCGCAA TTTCTTTCTTTCGACATTTTGCACGCCTTCCTTTCTCACGCGCGAGCCGC TAGAATATATTAATAGTCACCTTGGGCTTTGGCTACATACCCCCCGACTA TGACGAAAGTTACTCGTTCGCGTCTGGTTTCATTCTAAATGAAATGCTGC TTGCTTCGTCTGGCGCTGCTCGTTTTCAAGGATGACGTGGATAGCACGGC CGAAGGGCGAATGAAAGCTGTCATGCAGACAACACCATGGTTCTTTTGGC TGGTGTCTGTGGAGGAAGACGAAGACTGAAGTGAAGGCCTATCCCACGGT CGGATAGGTCGTGAAATTCTGAAGACTGTTGAATTGTCTAATAAGTTGAT ATATGGTACACAGTATGTGGATGCCAAGGGTATATAACATCGCGGGGATA GCAAGGAAATCTCCCCCCTCCCCCCACACACACATTTTTTCTTCTTCTCG ATATCACGAGCAGCAGAGGCCGTAAGCTAGGTGTTTGAAAACTTATGGGG AGATCTCAAATTGTGTTGTCTCTTCTGTTGCTGGGGGGCTGGTTTCGGAG AAAATTGGGCCGGGACAACCATGATCAGTCCCGGGAGGGTCTCAATACTT GTCACTTACTGTAATCGCTTCGTTTTTGCTGCGTTAGCGGGTGTTATACG TATTTTTCGGGGCATTCGTGGGTGTGTGTTGTGTGGCGCGGTCGATGGCC GCGGTGTTTCCGTGGTGGGAGGGTAATACAAAGCAGCTGCTTAAAGGCAG CGAACGACTCTCTCGTTGGAGTGCAACGATGACTTTGTCTCCAAACGTGG AGACGATAAACTAAGAGACCTTGTTCAGCGCACCAAGTAATTAAGTACCA AGTACGCGATCGACCGCACCATGCACCTCCATAGATATTTTCCTTGCACT CTCAAGTTTTTCAGTGTTGTATGGCAGGCAACGGATTTTCGATTGTGAGA CGGATTTCGCTGTTGGCAGCGGTATAGCGCGGTCGCTAGGAAAGGCAGGG GTCAGTTGCCCGATTTGCGATGTCTTTGGCGTTGTTTTTGTTCGACGTAG CAAGCTATTAAAGGGATTCTCAAACAGTAAAAAACAAGAGTGAAGCAGGG GGACTGTATGGCAGTGAAATGCTCTGTCTAGGCTCTCACGAGTCTACACT ACCCCTGCAAGGCGAAAAAGATGTTAACGAAATGTTGGAAGTCAGCCGTT CGTTCCGTGGCGGGGAGACGCATGTTTACTCGTGAAATTGTCGCGTCTAA AGACCGCGGTAGATGTGTGATACAATCGGTTGTCTACATCATGAAAGAAG ATCGAAGCGGGCTGACGCTGGATTGTCTTTTAGCGTATGTGTTTTGGAAA TCCATGGTCTGGGGTCCTTGCAGAGGTTTTATGGTCTCTAATCGTCGTTG AACCTAGGTGCATTCTTTTTTTTTTCTACATGGCAGCGCCCTTGGCCTAA TTTTGCTCACACCAAATGCGGGTAGCGTTGCGGTTGTTATCTTACTGTAT CTTGTTTTGATGATCAATGTGCTGCTTCCGAGCTCAAGGACGATGCCGGT ACAAATGGTTGGCGGGGGTGAAAT
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig10:105552..109925+

>mRNA_A-nodosum_M_contig10.11.1 ID=mRNA_A-nodosum_M_contig10.11.1|Name=mRNA_A-nodosum_M_contig10.11.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2130bp|location=Sequence derived from alignment at A-nodosum_M_contig10:105552..109925+ (Ascophyllum nodosum dioecious)
ATGTCGAAAAAAGGGAAAGTGAAGATGGGACTCGGAGATTTCCTGGGCTC
CCAGGCTGCCGCAGCCTCCCAACCGGTCAAGGGAAGGATTCTACCCTCCG
GGCCTGATCCTAACCGAGACCCTGATGAACGTCGCGGCGGCGGAGGTAGA
CGTTACGACGATGACTATGATGGACCAGGATCACGGGCAGAAGGCGCGGA
TACTTGGAGACGCGGACCTGGCGGAGGGGGCGCGGGTATGGGTACTAGCG
AACGACGCGGTGGAGGGTATGACAATGAGCGCGGTGGTATGGCCCCTGAG
GATGGGACGTGGCGCAGCCGAGCTCCTCCTGCGCGTGCGGGAGGCGGGGG
ATATGGTGACCGCTACGGTGATCGTGACGGTGGTCGTGACGGTGGTCGTA
TGGGTGGGGGAGGCTTCGATGATAGACGCGGAGGCAGGGACGGGGGCGGT
TACGATGCCCCACCACCGACAGAGCGCAAGCGACTCCAGTTGCACAGCCG
CACCGCGCCTCTACCGTTGCCTCCAATGTCCCCGAAGGAATCAGAGAAAC
CGACTCCAGCTCCCGCATCCAGGCCATCTGGCCCCAGATCGAACCCGTTT
GGCGCGGCGCAGGCGGTAGACACCACCCAGCGGGACAGGGAGATCGAAGC
CAAACTGGAGAGCGAGAGGCAAACCTCGTTCCGACGCCGCGACGACACCT
TTCGTTCTAGTGACAAGCCCGCCATTGCTACTGGAGACTCGAACCCGGAG
GAGGCGGGTACAAGCGTGAATGGGGTGGATGAGGAGATTGAACAAAAGGC
CGACTTGGATGACGAGGGAGGAGACGAAGCGAAGCCCGAAGTGGACGACA
AAGAGGCTGATGTCGAGAGCACCGCGCCGGGTATTGAGGACGCTGAACGA
GGTGGCGAGAAGCCGGCACCGCCTAAGCCGGTCGGCCGATGGGCAGCTCT
CCGACGGGAAGGGGGCGGCGATGACAGGCCTAGCCAGTCCGTTGGCGGCT
TCACGAGGAGGGATCGCGATGATGATCGCAGGGGTGGTGGGTATGGTCGG
GACGATCGGTCATCCTTCGGAAGAAAAAGCGATGATGTCGGCCCTGGGCG
GGGAAGTTTTACCAGTAGCCGTATGGGCCGAGAGCCTGTGCAGCCCCCAG
CCCCTCCTGCTGGGAATGCCTTTGCCAAGCGCTTTGGCTCCAACTTCGAC
CGCGACACGGACCGCGCGTACCCTCGCTCCTCTGGTGGCATGGGAGGGGG
CGGGTTTGACCGGCGAGATGACGAACGGCGTGCGGGCATGGGTGGTGGCG
GCTTTGACCGGCGAGATGACGAACGGCGTGTGGGCATGGGTGGTGGCGGC
TTTGATCGAAGGGGCGATTTCCGCGGCGGTGGTGGCGGCGGCATGGGTAT
GGGCCCTTCGAGATTCAACAGAGACAGGGAGAGCGATTCCCAGCGTCGGC
CTGATCCCAGTTCCCCTCTCGAGCGCCCCCCACAAGGTGGAAGGCTGTCC
AGCGGCAGCGCCGAGTCACCCTCGCCAGCACGCTCCTTTTCACAGATATC
GATCAAGGAAACCAAGGAGGCAAAGCCTTTGCCCAACCCGGTGCCGAAAC
CTGAGGTCACGCCCATGCCCGAGCCTGAGCCTGAGCCTGAACCTGAACCC
GAACCGAAAGAGGACCCGACGGAGGTGGCACGTGCGTCTGCTGAAGAGGC
GCTCGCATCCGGAAAGCGGGGCACGGAGCTCAAGGAGTTTGTAATGACGC
AAGAGAAGCGGACCACGGCGGGGGCCCTGCTGGCGGCCGCCCTGAAGGAT
GTCGCTACACCTCAGGACATGAAGTGGGCGCGGCAGGAGGAGTTCGGGGC
TGCGTTGGTTGCGCTGTCAGCGGACAACACAGAGGAGCAAGTGGGCATCA
TATACGCGGTGGTAGGCAAGTGCCATGAGATGGGATTCCCGAAAGAGACC
AACGGCGCAGTGGTGCAGACCATCTTCATGGGTATGTACAACTGCGACCT
CTGCGAGGAAGAAGCCTTCATCGAGTGGAAGGATGACGTGGATAGCACGG
CCGAAGGGCGAATGAAAGCTGTCATGCAGACAACACCATGGTTCTTTTGG
CTGGTGTCTGTGGAGGAAGACGAAGACTGA
back to top