Trimin1|138244|gw1.166.47.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|138244
Unique NameTrimin1|138244|gw1.166.47.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length175
Homology
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BLAST of jgi.p|Trimin1|138244 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 341 bits (874), Expect = 1.930e-118
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 
Query:    1 MIDRTAEFQGCIRVLHQHDGRPDQRPQYEAPQPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175
            MIDRTAEFQGCIRVLHQHDGRPDQRPQYEAPQPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF
Sbjct:    1 MIDRTAEFQGCIRVLHQHDGRPDQRPQYEAPQPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175
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BLAST of jgi.p|Trimin1|138244 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 2.110e-28
Identity = 70/184 (38.04%), Postives = 112/184 (60.87%), Query Frame = 0 
Query:    1 MIDRTAEFQGCIRVLH------QHDGRPDQ-RPQYEAP--QPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175
            M DRT EF G +           + G     R Q +    + ++F +  +++A+  EGT++LI +L +LVGRKG SN+P  EI+DV +LF+GDM  +Q+++S+LQ + DG  G RG+P   SQR  H  +++  L++ AQE   AF+ AL  R AV ++ N+R++ +S +R V  + Q++ PLF
Sbjct:    3 MTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADG--GTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLF 184
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138244 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z5V3_9STRA1.930e-118100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5KU27_9PHAE2.110e-2838.04t-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.70coord: 30..171
e-value: 4.4E-7
score: 31.7
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 33..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_166contigContig_166:279699..280223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138244mRNA_13333Tribonema minus UTEX_B_3156 mRNAContig_166 279699..280223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|138244|gw1.166.47.1 ID=Trimin1|138244|gw1.166.47.1|Name=jgi.p|Trimin1|138244|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=175bp
MIDRTAEFQGCIRVLHQHDGRPDQRPQYEAPQPTDFTKAVSALALSLEGT
AKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFID
GRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRE
LNDRRKVYSTTRSVGLSVQMNSPLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE